Miyakogusa Predicted Gene

Lj6g3v1878790.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1878790.1 Non Characterized Hit- tr|I1MFG6|I1MFG6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23091
PE,89.18,0,seg,NULL; zf-MYND,Zinc finger, MYND-type; HIT/MYND zinc
finger-like,NULL; ZF_MYND_1,Zinc finger, MYN,CUFF.60021.1
         (601 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g022910.1 | zinc finger MYND domain protein | HC | chr2:79...  1048   0.0  
Medtr5g036470.1 | zinc finger MYND domain protein | HC | chr5:15...   151   1e-36
Medtr5g036470.2 | zinc finger MYND domain protein | HC | chr5:15...   129   1e-29

>Medtr2g022910.1 | zinc finger MYND domain protein | HC |
           chr2:7979039-7977144 | 20130731
          Length = 631

 Score = 1048 bits (2709), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/601 (82%), Positives = 536/601 (89%)

Query: 1   MKVDGIAPNFIRSIYKASAALYRAEPWKRLRPGHFFGVRVGKDSDWNGKKQPFPCVQXXX 60
           MK+DGI  NFIRSIYKASAALYR EPWKRLRPGH+FG+RVGKDSDW+ KKQPFPCVQ   
Sbjct: 31  MKIDGIVTNFIRSIYKASAALYRTEPWKRLRPGHYFGIRVGKDSDWSAKKQPFPCVQFVG 90

Query: 61  XXXXXXXXYMFRSESDAKKMTGPRETVRVPNVELLRVTYEKESMMFPSNRKMIKSLSLEA 120
                   YM+RSESDAKKMTG RETVRVPNVE+LRVT+E ES+MFPSNRKMIKSLSLE 
Sbjct: 91  GDGGDIGFYMYRSESDAKKMTGSRETVRVPNVEVLRVTFEVESLMFPSNRKMIKSLSLEV 150

Query: 121 SGMDRFPVIDVARCTISGELRFRNPTLEELKFVYGFMKAISLVHSLLQVDREIGSKYSTA 180
           SG DRFPVIDVARCT++G+LRFRNPTL+EL+FVY FMKAI +VH LL VDR+ GSKYST 
Sbjct: 151 SGSDRFPVIDVARCTVAGDLRFRNPTLDELRFVYAFMKAICMVHPLLLVDRDGGSKYSTM 210

Query: 181 VNFEHFIETVDVQWPPEVTKGGYDLVAVTISHPPGQAYDDKSSSMSAGSTPTKFREPPSE 240
           V FE FIETVDVQWPPEVTKGGYDLVAVT+SHPPGQAYD+KSSS+SAGSTPTK+ EPP E
Sbjct: 211 VCFEPFIETVDVQWPPEVTKGGYDLVAVTVSHPPGQAYDEKSSSVSAGSTPTKYVEPPRE 270

Query: 241 DTFNDTKAYSSTGIRECAMCEKEVHGEQSLCCGRCRAVIYCSSICQKQHWSEAHKSLCGL 300
           DTF+D   YSSTG+R+CAMCE+EV GEQS+CCGRCRAV+YCSSICQKQ+W++ H+SLCGL
Sbjct: 271 DTFSDAIGYSSTGLRQCAMCEREVFGEQSICCGRCRAVVYCSSICQKQNWNDTHRSLCGL 330

Query: 301 YKAMMEREEELTIKIFLFPCSADQPCKWLESLGIHQKGMWSRKCSCNSHCPLGLLPVKGG 360
           YKAMMEREEEL I IFLFPCSADQPCKWLESL IHQKGMW RKCSC SHCP GLLPVKGG
Sbjct: 331 YKAMMEREEELAINIFLFPCSADQPCKWLESLDIHQKGMWRRKCSCYSHCPFGLLPVKGG 390

Query: 361 LRELWGELDDYEYPHDXXXXXXXXXXXXXXXGWSEYYTLRSLPLSSPVADILSHPLTVYH 420
           + E WGELDD EYPHD               GWSEYY LRSLP SSPVADILSHPLTVYH
Sbjct: 391 IHEQWGELDDIEYPHDSSFNNHFVSSPLLLSGWSEYYNLRSLPFSSPVADILSHPLTVYH 450

Query: 421 ILTTLNISSKNLILQGKEVIVHYLGPEGELDWMPAFAEVGHLLNGLGNVQIVMVGPEVPT 480
           ILTTLNISSKNLIL+GKEVI+HYLGPEGELDWMPAFAEVGHLLNGLGNVQIVMVGPEVPT
Sbjct: 451 ILTTLNISSKNLILKGKEVIIHYLGPEGELDWMPAFAEVGHLLNGLGNVQIVMVGPEVPT 510

Query: 481 NLSGTTSGIGSRVRVNLVRGIYQVEASYLPSPHVVIALNSKLESYSTWGGALDLIKSMDV 540
           NLSGTTSGIGSRVRVNLVRG+YQVEASYLPSPHVVI LNS+LE+YS+W GALDLIKS+ V
Sbjct: 511 NLSGTTSGIGSRVRVNLVRGVYQVEASYLPSPHVVIGLNSRLENYSSWSGALDLIKSIGV 570

Query: 541 PAFFTDQSEVSCVNAKQVLRNAGLHITQPVTPNPFRSPVKNLTPSSNLPSYSNGFVFGVN 600
           PAFFTDQSEV+CVNAKQVLRNAGLH+T PVTPNPFRSPVKNL PSSNLPSYSNGFVFGVN
Sbjct: 571 PAFFTDQSEVACVNAKQVLRNAGLHVTHPVTPNPFRSPVKNLMPSSNLPSYSNGFVFGVN 630

Query: 601 T 601
           T
Sbjct: 631 T 631


>Medtr5g036470.1 | zinc finger MYND domain protein | HC |
           chr5:15906233-15900547 | 20130731
          Length = 370

 Score =  151 bits (382), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 163/365 (44%), Gaps = 51/365 (13%)

Query: 272 CGRCRAVIYCSSICQKQHWSEAHKSLCGLYKAMMEREEELTIKIFL------FPCSADQP 325
           C RC AV YCS   +  HW+  HK  C   +  ME  EEL    F       F   A Q 
Sbjct: 20  CARCEAVAYCSLSHRIAHWNH-HKHECDRLQQQMESVEELNDFPFTSSHEATFQICAKQE 78

Query: 326 --CKWLESLGIHQKGMWSRKCSCNSHCPLGLLPVKGGLRELWGELDDYEYPHDXXXXXXX 383
             C +L   G+H+ G+W  +C C +      L        L   L     P         
Sbjct: 79  TRCSFLTKRGLHRVGIWMLECHCETSSASFDLLRSNNCWNLPSVLCPCRGPDSLVSEQLC 138

Query: 384 XXXXXXXXGWSEYYTLRSLPLSSPVADILSHPLTVYHILTTLNISSKNLILQGKEVIVHY 443
                    W +YY  R +PL SP+A +L  PLT+YH    + I++ NL +  K + +HY
Sbjct: 139 --------SWRDYYNWRGIPLDSPIALLLHWPLTIYHAAQLVGITTLNLDVSDK-LYIHY 189

Query: 444 LGPEGELDWMPAFAEVGHLLNGLGNVQIVMVGPEVPTNLSGTTSGIG------------- 490
           LGPE EL  +  F E+  L  G+ ++ I +VGP + +   G   GI              
Sbjct: 190 LGPEKELLQLAVFGELLALFPGV-HIHIDLVGPAIHSQRDGEKIGISKYPCCNEANCVCK 248

Query: 491 ---------SRVRVNLVRGIYQ------VEASYLPSPHVVIALNSKLESYSTWGGALDLI 535
                    S + + L RG Y       V+ S+   PH++IA N  + +YS+W  +++LI
Sbjct: 249 LVTENVSITSALTLQLWRGFYHDRYKDIVKDSF---PHLIIAPNGGIAAYSSWLPSIELI 305

Query: 536 KSMDVPAFFTDQSEVSCVNAKQVLRNA-GLHITQPVTPNPFRSPVKNLTPSSNLPSYSNG 594
             +DVPA FTD  E +C  A   ++   G  +  PV  NPFR P+        LP YSN 
Sbjct: 306 GKIDVPAVFTDYCEEACHLAASCIKTVTGRPLRLPVQLNPFRQPIAVEDSVLLLPCYSNC 365

Query: 595 FVFGV 599
           F+FG+
Sbjct: 366 FLFGI 370


>Medtr5g036470.2 | zinc finger MYND domain protein | HC |
           chr5:15906233-15900028 | 20130731
          Length = 342

 Score =  129 bits (323), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 148/343 (43%), Gaps = 58/343 (16%)

Query: 272 CGRCRAVIYCSSICQKQHWSEAHKSLCGLYKAMMEREEELTIKIFL------FPCSADQP 325
           C RC AV YCS   +  HW+  HK  C   +  ME  EEL    F       F   A Q 
Sbjct: 20  CARCEAVAYCSLSHRIAHWNH-HKHECDRLQQQMESVEELNDFPFTSSHEATFQICAKQE 78

Query: 326 --CKWLESLGIHQKGMWSRKCSCNSHCPLGLLPVKGGLRELWGELDDYEYPHDXXXXXXX 383
             C +L   G+H+ G+W  +C C +      L        L   L     P         
Sbjct: 79  TRCSFLTKRGLHRVGIWMLECHCETSSASFDLLRSNNCWNLPSVLCPCRGP--------D 130

Query: 384 XXXXXXXXGWSEYYTLRSLPLSSPVADILSHPLTVYHILTTLNISSKNLILQGKEVIVHY 443
                    W +YY  R +PL SP+A +L  PLT+YH    + I++ NL +  K + +HY
Sbjct: 131 SLVSEQLCSWRDYYNWRGIPLDSPIALLLHWPLTIYHAAQLVGITTLNLDVSDK-LYIHY 189

Query: 444 LGPEGELDWMPAFAEVGHLLNGLGNVQIVMVGPEVPTNLSGTTSGIG------------- 490
           LGPE EL  +  F E+  L  G+ ++ I +VGP + +   G   GI              
Sbjct: 190 LGPEKELLQLAVFGELLALFPGV-HIHIDLVGPAIHSQRDGEKIGISKYPCCNEANCVCK 248

Query: 491 ---------SRVRVNLVRGIYQ------VEASYLPSPHVVIALNSKLESYSTWGGALDLI 535
                    S + + L RG Y       V+ S+   PH++IA N  + +YS+W  +++LI
Sbjct: 249 LVTENVSITSALTLQLWRGFYHDRYKDIVKDSF---PHLIIAPNGGIAAYSSWLPSIELI 305

Query: 536 KSMDVPAFFTDQSEVSCVNAKQVLRNAGLHITQPVTPNPFRSP 578
             +DVPA FTD  E +C  A   ++         VT  P R P
Sbjct: 306 GKIDVPAVFTDYCEEACHLAASCIKT--------VTGRPLRLP 340