Miyakogusa Predicted Gene

Lj6g3v1874690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1874690.1 Non Characterized Hit- tr|C5XAM6|C5XAM6_SORBI
Putative uncharacterized protein Sb02g022810
OS=Sorghu,31.27,4e-18,seg,NULL,CUFF.60216.1
         (607 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g023290.1 | F0F1 ATP synthase subunit gamma | HC | chr2:81...   545   e-155
Medtr2g023280.1 | DUO pollen-like protein, putative | HC | chr2:...   523   e-148

>Medtr2g023290.1 | F0F1 ATP synthase subunit gamma | HC |
           chr2:8196994-8205127 | 20130731
          Length = 1021

 Score =  545 bits (1403), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 337/612 (55%), Positives = 391/612 (63%), Gaps = 45/612 (7%)

Query: 7   MDYSDVPYVHQAFLADWRPDTSAGTYSEHISSTSGEGNLARDAVSRENIQFYRAINDYGL 66
           MD+SDVPYVHQAFLADWRPDTS   +SEHISS S E NL  D++S+++ Q YR IN+YGL
Sbjct: 135 MDHSDVPYVHQAFLADWRPDTSTLNHSEHISSASAEVNLGHDSISQDS-QLYRGINNYGL 193

Query: 67  SGKVQHQN-YQHAFPFTPKFPQLFHTTSE-RSGTKGAPCADNPKNSVF--TSSTNYYYRP 122
           SG VQHQN  Q AFP   K P  FH+TS+ RSG KGAP A  PKN     TSS+ Y  RP
Sbjct: 194 SGNVQHQNGNQPAFPSIYKLPLPFHSTSDFRSGMKGAPSATIPKNPFLGTTSSSKYCSRP 253

Query: 123 YRSRKVNNAHLVKLAPDLPPVNLPPSVRVVSQTAFKGFQCGTSKMYPPGGSVTGCRIDNI 182
           YRSR+ N+AHLVKLAP LPPVNLPPSVRVVSQTAFKGF+ GTSK++P    V   R DN 
Sbjct: 254 YRSRRPNSAHLVKLAPGLPPVNLPPSVRVVSQTAFKGFETGTSKVHPCRDGVNDVRKDNS 313

Query: 183 ASQIPHGEKYGTVHPVEGAGPVLNGSVSGSLVERSGTAEGRSTVAEKSTCSELQMHPLLF 242
           ASQIPHGEK G  H  + A P+   S   S +E S TAEGRSTVAEKST ++LQMHPLLF
Sbjct: 314 ASQIPHGEKIGIDHRAKRARPMPKDSGVHSQLESSETAEGRSTVAEKSTYADLQMHPLLF 373

Query: 243 QATNEGNIPYYPLKXXXXXXXXXXXXXXXQPQLNLSLFHSSQKQSSIDCASKSLRSKNSM 302
           Q T  GN  YYP K               QPQLNLSLF SSQ+Q  +D A+KSL+SKNS 
Sbjct: 374 QVTEVGNTHYYPFKFKSDPSSSFSFFSGRQPQLNLSLFSSSQQQGHVDSANKSLQSKNSS 433

Query: 303 LRSAGIDFHPLLQKFNDTQSQACSDDIQAESLVNSGVLATANRSSGLNDKSNELDLDIHL 362
           LR  GIDFHPLLQK N+TQ+   SD IQAE LVNSGV  T N SSGL DKSNELDL+IHL
Sbjct: 434 LRLGGIDFHPLLQKSNNTQAPTSSDAIQAEPLVNSGVPDTTNISSGLYDKSNELDLEIHL 493

Query: 363 SSVSRNGKSVKSKQLEVQDPIGSKKTASTCGTAMKCQENSVPCRQQGVENPTTSCCELTS 422
           SSVS + KS+KS+QL+   PI S++  ++  T M     + P  QQG   P+ S C+L S
Sbjct: 494 SSVSESEKSMKSRQLKEHVPIESQQIIASSATEM-----NAPYCQQGGRIPSPSGCKLAS 548

Query: 423 SAPLVVPDDNITRYDVDDVGDQSHPGIVMXXXXXXXXXXXXXXHVEFECEEMADSEGEDG 482
           SAPLVVPDDNITRY  DDVG+QSHP IVM              HVEFECEEMADSEGEDG
Sbjct: 549 SAPLVVPDDNITRY--DDVGNQSHPEIVMEQEELRDSEEDIEEHVEFECEEMADSEGEDG 606

Query: 483 SGSENTL----------------------KVQNKEVPRDNPGTQVDDSLLTNIATLDMGL 520
           SG E                         +V N+EVPR N   Q+D  L T  A  +M L
Sbjct: 607 SGCEQASEFECEEMSDSEEEDGSGCEQAPEVPNEEVPRANSDIQLDSCLPTTDAMPNMTL 666

Query: 521 TREVKDGKNKNSWLSLDSSSTDNFDLPKAVLQRGTDTIAEEDTASRNSTICKAVTEARHP 580
             +  D KN + + +L  S        KA+LQ+ T     ED+AS+N +I KA     H 
Sbjct: 667 ISKEMDDKNSSRFKNLVPS--------KAMLQQVT---TGEDSASKNFSIGKADMGEGHS 715

Query: 581 MHIAQQRSAGPQ 592
             I Q  S GP+
Sbjct: 716 EDIVQSPSIGPR 727



 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 63/121 (52%), Gaps = 11/121 (9%)

Query: 474 MADSEGEDGSGSENTLKVQNKEVPRDNPGTQVDDSLLTNIATLDMGLTREVKDGKNKNSW 533
           M+DSE EDGSG E   +V N+EVPR N   Q+D  L T  A  +M L  +  D KN + +
Sbjct: 1   MSDSEEEDGSGCEQAPEVPNEEVPRANSDIQLDSCLPTTDAMPNMTLISKEMDDKNSSRF 60

Query: 534 LSLDSSSTDNFDLPKAVLQRGTDTIAEEDTASRNSTICKAVTEARHPMHIAQQRSAGPQA 593
            +L  S        KA+LQ+ T     ED+AS+N +I KA     H   I Q  S G + 
Sbjct: 61  KNLVPS--------KAMLQQVT---TGEDSASKNFSIGKADMGEGHSEDIVQSPSIGLEL 109

Query: 594 S 594
           S
Sbjct: 110 S 110


>Medtr2g023280.1 | DUO pollen-like protein, putative | HC |
            chr2:8187592-8196160 | 20130731
          Length = 1249

 Score =  523 bits (1347), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 305/492 (61%), Positives = 343/492 (69%), Gaps = 12/492 (2%)

Query: 7    MDYSDVPYVHQAFLADWRPDTSAGTYSEHISSTSGEGNLARDAVSRENIQFYRAINDYGL 66
            MD+SDVPYVHQAFLADWRPDTS   +SEHISS S E NL  D+VS+++ Q YR IN+YGL
Sbjct: 737  MDHSDVPYVHQAFLADWRPDTSTLNHSEHISSASAEVNLGHDSVSQDS-QLYRGINNYGL 795

Query: 67   SGKVQHQN-YQHAFPFTPKFPQLFHTTSE-RSGTKGAPCADNPKNSVF--TSSTNYYYRP 122
            SG VQHQN  Q AFP   K P  FH+TS+ RSG KGAP A  PKN     TSS+ Y  RP
Sbjct: 796  SGNVQHQNGNQPAFPSIYKLPLPFHSTSDFRSGMKGAPSATIPKNPFLGTTSSSKYCSRP 855

Query: 123  YRSRKVNNAHLVKLAPDLPPVNLPPSVRVVSQTAFKGFQCGTSKMYPPGGSVTGCRIDNI 182
            YRSR+ N+AHLVKLAP LPPVNLPPSVRVVSQTAFKGF+ GTSK++P    V   R DN 
Sbjct: 856  YRSRRPNSAHLVKLAPGLPPVNLPPSVRVVSQTAFKGFETGTSKVHPCRDGVNDVRKDNS 915

Query: 183  ASQIPHGEKYGTVHPVEGAGPVLNGSVSGSLVERSGTAEGRSTVAEKSTCSELQMHPLLF 242
            ASQIPHGEK G  H  + A P+   S   S +E S TAEGRSTVAEKST ++LQMHPLLF
Sbjct: 916  ASQIPHGEKIGIDHRAKRARPMPKDSGVHSQLESSETAEGRSTVAEKSTYADLQMHPLLF 975

Query: 243  QATNEGNIPYYPLKXXXXXXXXXXXXXXXQPQLNLSLFHSSQKQSSIDCASKSLRSKNSM 302
            Q T  GN  YYP K               QPQLNLSLF SSQ+Q  +D A+KSL+SKNS 
Sbjct: 976  QVTEVGNTHYYPFKFNSDPSSSFSFFSGRQPQLNLSLFSSSQQQGHVDSANKSLQSKNSS 1035

Query: 303  LRSAGIDFHPLLQKFNDTQSQACSDDIQAESLVNSGVLATANRSSGLNDKSNELDLDIHL 362
            LR  GIDFHPLLQK NDTQ+   SD IQAE LVNSGV  T N SSGL DKSNELDL+IHL
Sbjct: 1036 LRLGGIDFHPLLQKSNDTQAPTSSDAIQAEPLVNSGVPDTTNISSGLYDKSNELDLEIHL 1095

Query: 363  SSVSRNGKSVKSKQLEVQDPIGSKKTASTCGTAMKCQENSVPCRQQGVENPTTSCCELTS 422
            SSVS + KS+KS+QL+   PI S++  ++  T M     + P  QQG   P+ S C L S
Sbjct: 1096 SSVSESEKSMKSRQLKEHVPIESQQIIASSATEM-----NAPYCQQGGRIPSPSGCILAS 1150

Query: 423  SAPLVVPDDNITRYDVDDVGDQSHPGIVMXXXXXXXXXXXXXXHVEFECEEMADSEGEDG 482
            SAPLVVPDDNITRY  DDVG+QSHP IVM              HVEFECEEMADSEGEDG
Sbjct: 1151 SAPLVVPDDNITRY--DDVGNQSHPEIVMEQEELSDSEEDIEEHVEFECEEMADSEGEDG 1208

Query: 483  SGSENTLKVQNK 494
            SG E   +VQNK
Sbjct: 1209 SGCEQASEVQNK 1220