Miyakogusa Predicted Gene
- Lj6g3v1874650.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1874650.1 Non Characterized Hit- tr|Q9XEB6|Q9XEB6_ARATH
Putative uncharacterized protein AT4g04630
OS=Arabidop,88,1e-18,Senescence_reg,Senescence regulator;
seg,NULL,CUFF.60012.1
(110 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g023390.1 | senescence regulator | HC | chr2:8253146-82536... 103 4e-23
Medtr3g052330.1 | senescence regulator | HC | chr3:20712143-2071... 85 1e-17
Medtr3g052330.2 | senescence regulator | HC | chr3:20712177-2071... 85 1e-17
Medtr2g018175.1 | senescence regulator | HC | chr2:5719063-57201... 67 5e-12
Medtr2g094410.1 | senescence regulator | HC | chr2:40255783-4025... 66 6e-12
Medtr2g086660.1 | senescence regulator | HC | chr2:36431537-3643... 65 1e-11
Medtr4g059320.1 | senescence regulator | HC | chr4:21779245-2177... 65 2e-11
Medtr7g105130.1 | senescence regulator | HC | chr7:42622940-4262... 64 3e-11
Medtr2g086660.2 | senescence regulator | HC | chr2:36431537-3643... 62 1e-10
Medtr2g086660.3 | senescence regulator | HC | chr2:36431537-3643... 62 1e-10
Medtr2g023070.2 | senescence regulator | HC | chr2:8067704-80698... 61 2e-10
Medtr2g023070.1 | senescence regulator | HC | chr2:8067704-80691... 61 2e-10
Medtr4g132020.1 | senescence regulator | HC | chr4:55142282-5514... 60 6e-10
Medtr7g101250.1 | senescence regulator | HC | chr7:40859944-4086... 55 1e-08
>Medtr2g023390.1 | senescence regulator | HC | chr2:8253146-8253635
| 20130731
Length = 156
Score = 103 bits (256), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/50 (96%), Positives = 50/50 (100%)
Query: 61 MVPPHEWLARKLARSQISSFSVCEGMGRTLKGRDLSKVRNAVLTKTGFIE 110
MVPPHEW+ARKLARSQISSFSVCEGMGRTLKGRDLSKVRNA+LTKTGFIE
Sbjct: 107 MVPPHEWIARKLARSQISSFSVCEGMGRTLKGRDLSKVRNAILTKTGFIE 156
>Medtr3g052330.1 | senescence regulator | HC |
chr3:20712143-20713744 | 20130731
Length = 200
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 46/49 (93%)
Query: 62 VPPHEWLARKLARSQISSFSVCEGMGRTLKGRDLSKVRNAVLTKTGFIE 110
VPPHE ++R+LARSQISSFSV EG+GRTLKGRDLSK+RN+VL KTGF+E
Sbjct: 150 VPPHEIISRRLARSQISSFSVFEGVGRTLKGRDLSKMRNSVLIKTGFLE 198
>Medtr3g052330.2 | senescence regulator | HC |
chr3:20712177-20713718 | 20130731
Length = 200
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 46/49 (93%)
Query: 62 VPPHEWLARKLARSQISSFSVCEGMGRTLKGRDLSKVRNAVLTKTGFIE 110
VPPHE ++R+LARSQISSFSV EG+GRTLKGRDLSK+RN+VL KTGF+E
Sbjct: 150 VPPHEIISRRLARSQISSFSVFEGVGRTLKGRDLSKMRNSVLIKTGFLE 198
>Medtr2g018175.1 | senescence regulator | HC | chr2:5719063-5720112
| 20130731
Length = 127
Score = 66.6 bits (161), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 39/50 (78%), Gaps = 2/50 (4%)
Query: 61 MVPPHEWLARKLARSQISSFSVCEGMGRTLKGRDLSKVRNAVLTKTGFIE 110
MVPPH +AR+LA +FS+C G GRTLKGRDLS+VRN++L TGFIE
Sbjct: 79 MVPPHLIMARRLAGKM--TFSMCSGHGRTLKGRDLSRVRNSILRMTGFIE 126
>Medtr2g094410.1 | senescence regulator | HC |
chr2:40255783-40256708 | 20130731
Length = 156
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 40/47 (85%), Gaps = 4/47 (8%)
Query: 62 VPPHEWLARKLARSQISSFSVCEGMGRTLKGRDLSKVRNAVLTKTGF 108
+PPHE+LAR ++++SFSV EG+GRTLKGRDLS+VRNA+ KTGF
Sbjct: 112 IPPHEFLAR----TRMASFSVHEGVGRTLKGRDLSRVRNAIWAKTGF 154
>Medtr2g086660.1 | senescence regulator | HC |
chr2:36431537-36432609 | 20130731
Length = 255
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 41/49 (83%)
Query: 62 VPPHEWLARKLARSQISSFSVCEGMGRTLKGRDLSKVRNAVLTKTGFIE 110
+PPHE+L+R++ S + S S+ EG+GRTLKGRD+ +VRNAVL++TGF +
Sbjct: 207 MPPHEYLSRQVDFSPMHSCSLFEGVGRTLKGRDMRQVRNAVLSQTGFFD 255
>Medtr4g059320.1 | senescence regulator | HC |
chr4:21779245-21778390 | 20130731
Length = 158
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 40/47 (85%), Gaps = 4/47 (8%)
Query: 62 VPPHEWLARKLARSQISSFSVCEGMGRTLKGRDLSKVRNAVLTKTGF 108
+PPHE+LAR ++++SFSV EG+GRTLKGRDLS++RNA+ KTGF
Sbjct: 115 LPPHEFLAR----TRVASFSVHEGVGRTLKGRDLSRLRNAIWAKTGF 157
>Medtr7g105130.1 | senescence regulator | HC |
chr7:42622940-42623975 | 20130731
Length = 217
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 63 PPHEWLARKLARSQISSFSVCEGMGRTLKGRDLSKVRNAVLTKTGFIE 110
PPHE +AR S ++FSV EG+GRTLKGRDL +VRNAVL +TGF++
Sbjct: 170 PPHEIVARGSGVSPRTTFSVLEGVGRTLKGRDLRQVRNAVLRQTGFLD 217
>Medtr2g086660.2 | senescence regulator | HC |
chr2:36431537-36434931 | 20130731
Length = 277
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 40/48 (83%)
Query: 62 VPPHEWLARKLARSQISSFSVCEGMGRTLKGRDLSKVRNAVLTKTGFI 109
+PPHE+L+R++ S + S S+ EG+GRTLKGRD+ +VRNAVL++TG I
Sbjct: 207 MPPHEYLSRQVDFSPMHSCSLFEGVGRTLKGRDMRQVRNAVLSQTGGI 254
>Medtr2g086660.3 | senescence regulator | HC |
chr2:36431537-36434615 | 20130731
Length = 277
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 40/48 (83%)
Query: 62 VPPHEWLARKLARSQISSFSVCEGMGRTLKGRDLSKVRNAVLTKTGFI 109
+PPHE+L+R++ S + S S+ EG+GRTLKGRD+ +VRNAVL++TG I
Sbjct: 207 MPPHEYLSRQVDFSPMHSCSLFEGVGRTLKGRDMRQVRNAVLSQTGGI 254
>Medtr2g023070.2 | senescence regulator | HC | chr2:8067704-8069838
| 20130731
Length = 218
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%), Gaps = 3/48 (6%)
Query: 61 MVPPHEWLARKLARSQISSFSVCEGMGRTLKGRDLSKVRNAVLTKTGF 108
MVPPHE+LAR + ++ SV EG+GRTLKGRDLS+VR+AV ++TGF
Sbjct: 172 MVPPHEYLARSR---KNAAKSVFEGVGRTLKGRDLSRVRDAVWSQTGF 216
>Medtr2g023070.1 | senescence regulator | HC | chr2:8067704-8069103
| 20130731
Length = 218
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%), Gaps = 3/48 (6%)
Query: 61 MVPPHEWLARKLARSQISSFSVCEGMGRTLKGRDLSKVRNAVLTKTGF 108
MVPPHE+LAR + ++ SV EG+GRTLKGRDLS+VR+AV ++TGF
Sbjct: 172 MVPPHEYLARSR---KNAAKSVFEGVGRTLKGRDLSRVRDAVWSQTGF 216
>Medtr4g132020.1 | senescence regulator | HC |
chr4:55142282-55143457 | 20130731
Length = 176
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 38/48 (79%), Gaps = 3/48 (6%)
Query: 61 MVPPHEWLARKLARSQISSFSVCEGMGRTLKGRDLSKVRNAVLTKTGF 108
MVPPHE+LAR ++++ SV EG+GRTLKGRDL +VR+AV +TGF
Sbjct: 130 MVPPHEYLARG---RKMAANSVFEGVGRTLKGRDLRRVRDAVWNQTGF 174
>Medtr7g101250.1 | senescence regulator | HC |
chr7:40859944-40861013 | 20130731
Length = 160
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 34/47 (72%), Gaps = 4/47 (8%)
Query: 62 VPPHEWLARKLARSQISSFSVCEGMGRTLKGRDLSKVRNAVLTKTGF 108
+PPHE+LAR ++ +S SV EG GRTLKGRDL VRNA+ K GF
Sbjct: 116 LPPHEYLAR----TRGASLSVHEGKGRTLKGRDLRSVRNAIWKKVGF 158