Miyakogusa Predicted Gene

Lj6g3v1873610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1873610.1 Non Characterized Hit- tr|I3S677|I3S677_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.33,0,Ubiquitin-like,NULL; MICROTUBULE ASSOCIATED
PROTEIN-LIKE,NULL; MICROTUBULE-ASSOCIATED PROTEINS 1A/1B,CUFF.60015.1
         (120 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g048510.1 | gaba-receptor-associated protein ubiquitin dom...   217   2e-57
Medtr2g023430.1 | gaba-receptor-associated protein ubiquitin dom...   217   2e-57
Medtr4g101090.1 | gaba-receptor-associated protein ubiquitin dom...   200   3e-52
Medtr4g101090.2 | gaba-receptor-associated protein ubiquitin dom...   200   3e-52
Medtr2g088230.1 | gaba-receptor-associated protein ubiquitin dom...   187   3e-48
Medtr4g123760.1 | autophagy protein Atg8 ubiquitin-like protein ...   152   9e-38
Medtr4g123760.2 | autophagy protein Atg8 ubiquitin-like protein ...   152   9e-38
Medtr4g037225.1 | gaba-receptor-associated protein ubiquitin dom...   150   2e-37
Medtr4g037225.2 | gaba-receptor-associated protein ubiquitin dom...   150   2e-37
Medtr1g086310.1 | autophagy protein Atg8 ubiquitin-like protein ...   140   2e-34
Medtr7g096540.1 | autophagy protein Atg8 ubiquitin-like protein ...    88   2e-18

>Medtr4g048510.1 | gaba-receptor-associated protein ubiquitin domain
           protein | HC | chr4:17210565-17207135 | 20130731
          Length = 120

 Score =  217 bits (552), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 100/116 (86%), Positives = 112/116 (96%)

Query: 3   AKSSFKLQHPLERRQAESGRIREKYPDRIPVIVEKADRTDIPDIDKKKYLVPADLTVGQF 62
           AKSSFK +HPLERRQAE+ RIREKYPDRIPVIVE+A++TD+P+IDKKKYLVPADLTVGQF
Sbjct: 2   AKSSFKTEHPLERRQAEAARIREKYPDRIPVIVERAEKTDVPEIDKKKYLVPADLTVGQF 61

Query: 63  VYVVRKRIKLSAEKAIFVFIKNTLPPTASLMSAVYEENKDEDGFLYMTYSGENTFG 118
           VYVVRKRIKLS EKAIF+F+KN LPPTA++MSA+YEENKDEDGFLYMTYSGENTFG
Sbjct: 62  VYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 117


>Medtr2g023430.1 | gaba-receptor-associated protein ubiquitin domain
           protein | HC | chr2:8277496-8280062 | 20130731
          Length = 120

 Score =  217 bits (552), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 103/117 (88%), Positives = 112/117 (95%)

Query: 3   AKSSFKLQHPLERRQAESGRIREKYPDRIPVIVEKADRTDIPDIDKKKYLVPADLTVGQF 62
           +K+SFK QHP ERRQAES RIREKYPDR+PVIVEKA R+DI DIDKKKYLVPADL+VGQF
Sbjct: 2   SKASFKTQHPFERRQAESSRIREKYPDRVPVIVEKAGRSDIADIDKKKYLVPADLSVGQF 61

Query: 63  VYVVRKRIKLSAEKAIFVFIKNTLPPTASLMSAVYEENKDEDGFLYMTYSGENTFGS 119
           VYVVRKRIKLSAEKAIFVFI+NTLPPTA+LMSA+YEE+KDEDGFLYMTYSGENTFGS
Sbjct: 62  VYVVRKRIKLSAEKAIFVFIENTLPPTAALMSALYEEHKDEDGFLYMTYSGENTFGS 118


>Medtr4g101090.1 | gaba-receptor-associated protein ubiquitin domain
           protein | HC | chr4:41752327-41755124 | 20130731
          Length = 122

 Score =  200 bits (508), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 93/116 (80%), Positives = 107/116 (92%)

Query: 3   AKSSFKLQHPLERRQAESGRIREKYPDRIPVIVEKADRTDIPDIDKKKYLVPADLTVGQF 62
           AKS FK +H LE+R+AE+ RIREKYPDRIPVIVEKA+R+DIP IDKKKYLVPADLTVGQF
Sbjct: 2   AKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQF 61

Query: 63  VYVVRKRIKLSAEKAIFVFIKNTLPPTASLMSAVYEENKDEDGFLYMTYSGENTFG 118
           VYV+RKRIKLSAEKAIF+F+ N LPPT ++MSA+Y+E KDEDGFLY+TYSGENTFG
Sbjct: 62  VYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYDEKKDEDGFLYVTYSGENTFG 117


>Medtr4g101090.2 | gaba-receptor-associated protein ubiquitin domain
           protein | HC | chr4:41752445-41755124 | 20130731
          Length = 122

 Score =  200 bits (508), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 93/116 (80%), Positives = 107/116 (92%)

Query: 3   AKSSFKLQHPLERRQAESGRIREKYPDRIPVIVEKADRTDIPDIDKKKYLVPADLTVGQF 62
           AKS FK +H LE+R+AE+ RIREKYPDRIPVIVEKA+R+DIP IDKKKYLVPADLTVGQF
Sbjct: 2   AKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQF 61

Query: 63  VYVVRKRIKLSAEKAIFVFIKNTLPPTASLMSAVYEENKDEDGFLYMTYSGENTFG 118
           VYV+RKRIKLSAEKAIF+F+ N LPPT ++MSA+Y+E KDEDGFLY+TYSGENTFG
Sbjct: 62  VYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYDEKKDEDGFLYVTYSGENTFG 117


>Medtr2g088230.1 | gaba-receptor-associated protein ubiquitin domain
           protein | HC | chr2:37165680-37163050 | 20130731
          Length = 108

 Score =  187 bits (474), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 90/116 (77%), Positives = 101/116 (87%), Gaps = 12/116 (10%)

Query: 3   AKSSFKLQHPLERRQAESGRIREKYPDRIPVIVEKADRTDIPDIDKKKYLVPADLTVGQF 62
           AKSSFKL+HPLERRQAE+            VIVE+A+++D+PDIDKKKYLVPADLTVGQF
Sbjct: 2   AKSSFKLEHPLERRQAEA------------VIVERAEKSDVPDIDKKKYLVPADLTVGQF 49

Query: 63  VYVVRKRIKLSAEKAIFVFIKNTLPPTASLMSAVYEENKDEDGFLYMTYSGENTFG 118
           VYVVRKRIKLS EKAIF+F+KN LPPTA +MSA+YEENKDEDGFLYMTYSGENTFG
Sbjct: 50  VYVVRKRIKLSPEKAIFIFVKNILPPTAGMMSAIYEENKDEDGFLYMTYSGENTFG 105


>Medtr4g123760.1 | autophagy protein Atg8 ubiquitin-like protein |
           HC | chr4:51010377-51007802 | 20130731
          Length = 118

 Score =  152 bits (383), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 68/118 (57%), Positives = 93/118 (78%)

Query: 1   MAAKSSFKLQHPLERRQAESGRIREKYPDRIPVIVEKADRTDIPDIDKKKYLVPADLTVG 60
           M   +SFK +  L+ R+ ES  I  KYPDRIPVI+EK  RTD+P++DKKKYLVP D++VG
Sbjct: 1   MGKINSFKQEFSLDERRKESQSIIVKYPDRIPVIIEKYSRTDLPELDKKKYLVPRDMSVG 60

Query: 61  QFVYVVRKRIKLSAEKAIFVFIKNTLPPTASLMSAVYEENKDEDGFLYMTYSGENTFG 118
           QF++++  R++L+  KA+F+F+KNTLP TASLM+++Y+  K+EDGFLYM YS E TFG
Sbjct: 61  QFIHILSSRLRLTPGKALFIFVKNTLPQTASLMTSIYQTYKEEDGFLYMCYSSEKTFG 118


>Medtr4g123760.2 | autophagy protein Atg8 ubiquitin-like protein |
           HC | chr4:51010399-51007802 | 20130731
          Length = 118

 Score =  152 bits (383), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 68/118 (57%), Positives = 93/118 (78%)

Query: 1   MAAKSSFKLQHPLERRQAESGRIREKYPDRIPVIVEKADRTDIPDIDKKKYLVPADLTVG 60
           M   +SFK +  L+ R+ ES  I  KYPDRIPVI+EK  RTD+P++DKKKYLVP D++VG
Sbjct: 1   MGKINSFKQEFSLDERRKESQSIIVKYPDRIPVIIEKYSRTDLPELDKKKYLVPRDMSVG 60

Query: 61  QFVYVVRKRIKLSAEKAIFVFIKNTLPPTASLMSAVYEENKDEDGFLYMTYSGENTFG 118
           QF++++  R++L+  KA+F+F+KNTLP TASLM+++Y+  K+EDGFLYM YS E TFG
Sbjct: 61  QFIHILSSRLRLTPGKALFIFVKNTLPQTASLMTSIYQTYKEEDGFLYMCYSSEKTFG 118


>Medtr4g037225.1 | gaba-receptor-associated protein ubiquitin domain
           protein | HC | chr4:13717673-13715664 | 20130731
          Length = 120

 Score =  150 bits (380), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 72/114 (63%), Positives = 92/114 (80%), Gaps = 2/114 (1%)

Query: 3   AKSSFKLQHPLERRQAESGRIREKYPDRIPVIVEKADRTDIPDIDKKKYLVPADLTVGQF 62
           +K S+K +H  ERRQAE  RIREK+ DR+PVIVEKA+R+DI DIDKKKYLVP DL+V +F
Sbjct: 2   SKPSYKTKHSFERRQAEYNRIREKFSDRVPVIVEKAERSDIADIDKKKYLVPGDLSVAKF 61

Query: 63  VYVVRKRIKLSAEKAIFVFIKNTLPP--TASLMSAVYEENKDEDGFLYMTYSGE 114
           ++VVR RI+LS +K IF F+ N   P   ++LMS++YEE+KDEDGFLYMTY+ E
Sbjct: 62  LFVVRHRIRLSEDKDIFGFVHNNQSPVVASALMSSLYEEHKDEDGFLYMTYNEE 115


>Medtr4g037225.2 | gaba-receptor-associated protein ubiquitin domain
           protein | HC | chr4:13717773-13715596 | 20130731
          Length = 120

 Score =  150 bits (380), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 72/114 (63%), Positives = 92/114 (80%), Gaps = 2/114 (1%)

Query: 3   AKSSFKLQHPLERRQAESGRIREKYPDRIPVIVEKADRTDIPDIDKKKYLVPADLTVGQF 62
           +K S+K +H  ERRQAE  RIREK+ DR+PVIVEKA+R+DI DIDKKKYLVP DL+V +F
Sbjct: 2   SKPSYKTKHSFERRQAEYNRIREKFSDRVPVIVEKAERSDIADIDKKKYLVPGDLSVAKF 61

Query: 63  VYVVRKRIKLSAEKAIFVFIKNTLPP--TASLMSAVYEENKDEDGFLYMTYSGE 114
           ++VVR RI+LS +K IF F+ N   P   ++LMS++YEE+KDEDGFLYMTY+ E
Sbjct: 62  LFVVRHRIRLSEDKDIFGFVHNNQSPVVASALMSSLYEEHKDEDGFLYMTYNEE 115


>Medtr1g086310.1 | autophagy protein Atg8 ubiquitin-like protein |
           HC | chr1:38625116-38626309 | 20130731
          Length = 121

 Score =  140 bits (354), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 67/118 (56%), Positives = 85/118 (72%)

Query: 1   MAAKSSFKLQHPLERRQAESGRIREKYPDRIPVIVEKADRTDIPDIDKKKYLVPADLTVG 60
           M   S F+ +   E+R  ES  I  KYPDRIPVIVEK  + D+P ++KKKYLVP DL+VG
Sbjct: 1   MGGGSYFQNEFTFEQRLEESRDIIAKYPDRIPVIVEKYTKCDLPHLEKKKYLVPRDLSVG 60

Query: 61  QFVYVVRKRIKLSAEKAIFVFIKNTLPPTASLMSAVYEENKDEDGFLYMTYSGENTFG 118
            F++++  R+ L A KA+FVF+KNTLP TAS+M +VY   KDEDGFLY+ YS E TFG
Sbjct: 61  HFIHILSSRLNLPAGKALFVFVKNTLPQTASMMDSVYRSFKDEDGFLYLYYSTEKTFG 118


>Medtr7g096540.1 | autophagy protein Atg8 ubiquitin-like protein |
           HC | chr7:38739985-38740615 | 20130731
          Length = 62

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 52/62 (83%)

Query: 57  LTVGQFVYVVRKRIKLSAEKAIFVFIKNTLPPTASLMSAVYEENKDEDGFLYMTYSGENT 116
           ++VGQF++++  R++L+  KA+F+F+KNTLP TASLM+++Y+  K+EDGFLYM YS E T
Sbjct: 1   MSVGQFIHILSSRLRLTPGKALFIFVKNTLPQTASLMTSIYQTYKEEDGFLYMCYSSEKT 60

Query: 117 FG 118
           FG
Sbjct: 61  FG 62