Miyakogusa Predicted Gene

Lj6g3v1791970.3
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1791970.3 tr|G8YKY9|G8YKY9_PICSO Piso0_001501 protein
OS=Pichia sorbitophila (strain ATCC MYA-4447 / BCRC
2208,36.52,8e-18,PHOSPHATASE-RELATED,NULL; UBX DOMAIN CONTAINING
PROTEIN,NULL; Domain present in Saccharomyces cerevi,CUFF.59943.3
         (171 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g024420.1 | UBA and UBX domain plant protein | HC | chr2:8...   289   1e-78
Medtr5g085870.1 | UBA and UBX domain plant protein | HC | chr5:3...   186   1e-47

>Medtr2g024420.1 | UBA and UBX domain plant protein | HC |
           chr2:8816758-8821254 | 20130731
          Length = 303

 Score =  289 bits (739), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 146/173 (84%), Positives = 152/173 (87%), Gaps = 5/173 (2%)

Query: 1   MASRDTKKPSKPSTSRAGGIRTLSDLNRPXXXXXXXXXGPQEYYTGGEKSGMLVQDPTKG 60
           MASRD KK S   +SRAG IRTLSDLNRP         GPQEYYTGGEKSGMLVQDP+KG
Sbjct: 1   MASRDNKKAS---SSRAGRIRTLSDLNRPSADSDSDSDGPQEYYTGGEKSGMLVQDPSKG 57

Query: 61  NDVDAIFNQARQLGAVERHLDQLQEPPRSTSFTGTGRVLSGETV--QSTSQQPESVVHNI 118
           NDVDAIFNQARQLGAVER LDQLQEPPRSTSFTGTGR+LSG+TV   S SQQPESVVHNI
Sbjct: 58  NDVDAIFNQARQLGAVERPLDQLQEPPRSTSFTGTGRLLSGDTVPTASNSQQPESVVHNI 117

Query: 119 VFWSNGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADRRTSVNVNLIR 171
           VFWSNGFTVNDGPLRRLDDP NASFLESIKKSECPKELEPADRR++VNVNLIR
Sbjct: 118 VFWSNGFTVNDGPLRRLDDPANASFLESIKKSECPKELEPADRRSAVNVNLIR 170


>Medtr5g085870.1 | UBA and UBX domain plant protein | HC |
           chr5:37113793-37109706 | 20130731
          Length = 405

 Score =  186 bits (471), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 100/165 (60%), Positives = 113/165 (68%), Gaps = 16/165 (9%)

Query: 13  STSRAGGIRTLSDLNRPXXXXXXXXXGPQEYYTGGEKSGMLVQDPTKG-NDVDAIFNQAR 71
           S SR  GIRTL D+ R           PQEYY GG+KSGMLVQDPT+G N VD IF+QA+
Sbjct: 114 SGSRQSGIRTLRDVKRDQDSDSESDE-PQEYYAGGQKSGMLVQDPTRGGNSVDDIFDQAK 172

Query: 72  QLGAVERHLDQLQEPP-----RSTSFTGTGRVLSGETVQSTSQQPESVVHNIVFWSNGFT 126
           Q+           EPP     RS SFTGT R+LSGE V S  Q  ESV H + FW NGF+
Sbjct: 173 QVAV---------EPPAENSSRSRSFTGTARLLSGEAVPSAPQPVESVTHVVTFWRNGFS 223

Query: 127 VNDGPLRRLDDPENASFLESIKKSECPKELEPADRRTSVNVNLIR 171
           VNDGPLRRL+DP+NA FLESIKKSECPKELEP DRRTSV ++L R
Sbjct: 224 VNDGPLRRLEDPQNAEFLESIKKSECPKELEPTDRRTSVRLSLTR 268