Miyakogusa Predicted Gene

Lj6g3v1790930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1790930.1 tr|G6FQU5|G6FQU5_9CYAN PAP fibrillin family
protein OS=Fischerella sp. JSC-11 GN=FJSC11DRAFT_1242
PE,34.56,9e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; PAP_fibrillin,Plastid lipid-associated pr,CUFF.59942.1
         (313 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g025050.1 | plastid lipid-associated protein | HC | chr2:8...   409   e-114
Medtr2g025040.1 | plastid lipid-associated protein | HC | chr2:8...   365   e-101
Medtr5g029590.1 | plastid fibrillin | HC | chr5:12424334-1242874...   186   2e-47
Medtr1g099880.1 | plastid fibrillin | LC | chr1:45073975-4507248...   136   2e-32
Medtr8g092680.1 | plastid lipid-associated protein | HC | chr8:3...    69   4e-12
Medtr1g054070.1 | plastid lipid-associated protein | HC | chr1:2...    49   7e-06

>Medtr2g025050.1 | plastid lipid-associated protein | HC |
           chr2:8885310-8882730 | 20130731
          Length = 317

 Score =  409 bits (1051), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/317 (72%), Positives = 249/317 (78%), Gaps = 4/317 (1%)

Query: 1   MTSISHLNQL-TSRTLPATPLISTASIFPPS-TVGIRSKPVGTPRISAHIPRPVVIARAK 58
           M S+S+LNQL  + TLP T L ST SI P + TVG  +K V  P + A   R VV  +A 
Sbjct: 1   MASLSNLNQLLHTNTLPVTSLNSTPSISPSTITVGFLNKHVRKPIVLADGLRRVVYVQAN 60

Query: 59  TSDDEWGPEPSS--LAAXXXXXXXXXXXXXXXXXXALVDSFYGTDRGLKATSDTRAVIVE 116
             DDEWGPEPS+    A                  ALV SFYGTDRGLKATS+TRA IVE
Sbjct: 61  RIDDEWGPEPSAGVAVAEVQATEKVSDGETEKLKKALVGSFYGTDRGLKATSETRAEIVE 120

Query: 117 LITQLEAKNPTAAPTDALTLLNGKWILAYTSFAGLYPLLSRGTFSLVKVEEISQTIDSEN 176
           LITQLEAKNPT A TDAL+LLNGKWILAYTSFAGL+PLLS G   L+ VEEISQTIDSE+
Sbjct: 121 LITQLEAKNPTPASTDALSLLNGKWILAYTSFAGLFPLLSSGLLPLLTVEEISQTIDSES 180

Query: 177 FAVENSVRFAGPLTTTSISTNAKFEIRSPKRVQIKFEEGIIGTPQLTDSLVIPENVEFLG 236
             V+NSV FAGPLTTTSISTNAKFE+RSP R+QIKFEEG+IGTPQLTDSL IPENVE LG
Sbjct: 181 LTVQNSVLFAGPLTTTSISTNAKFEVRSPNRLQIKFEEGVIGTPQLTDSLEIPENVEVLG 240

Query: 237 QNIDLTPFKGILTSVQDTASSVVRTISNQPPLKIPISGSNAQSWLLTTYLDEELRISRGD 296
           Q IDL+PFKGI TSVQ+TASSVV+TISNQPPLKIPIS  NAQSWLLTTYLDEELRISRGD
Sbjct: 241 QKIDLSPFKGIFTSVQNTASSVVQTISNQPPLKIPISNDNAQSWLLTTYLDEELRISRGD 300

Query: 297 GGSVFVLIKEGSSLLTN 313
           GGSVFVLIKEGSSLLTN
Sbjct: 301 GGSVFVLIKEGSSLLTN 317


>Medtr2g025040.1 | plastid lipid-associated protein | HC |
           chr2:8881076-8879139 | 20130731
          Length = 316

 Score =  365 bits (936), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 212/318 (66%), Positives = 242/318 (76%), Gaps = 7/318 (2%)

Query: 1   MTSISHLNQLTS-RTLPATPLISTASIFPPS-TVGIRSKPVGTPRISAHIPRPVVIARAK 58
           M S+S+LNQL    TLP T L ST SI P + T G++SK      + A   R VV  RA 
Sbjct: 1   MASLSNLNQLLHINTLPVTSLNSTPSITPSTITFGLQSKNARKSILVADGLRRVVYVRAT 60

Query: 59  TSDD---EWGPEPSSLAAXXXXXXXXXXXXXXXXXXALVDSFYGTDRGLKATSDTRAVIV 115
            +DD   EWG EPS+  A                   LV SFYGT RGLKA S+TRA I 
Sbjct: 61  ANDDDDDEWGSEPSADVAVAEVIVPESETEKLKKD--LVGSFYGTARGLKAASETRAEIF 118

Query: 116 ELITQLEAKNPTAAPTDALTLLNGKWILAYTSFAGLYPLLSRGTFSLVKVEEISQTIDSE 175
           ELI+QLEAKNPT A TDAL+LL+GKWILAYTS+AGL+PLLS G   L++VEE+SQTIDSE
Sbjct: 119 ELISQLEAKNPTPASTDALSLLDGKWILAYTSYAGLFPLLSSGLLPLLEVEELSQTIDSE 178

Query: 176 NFAVENSVRFAGPLTTTSISTNAKFEIRSPKRVQIKFEEGIIGTPQLTDSLVIPENVEFL 235
           + +V+NSV  AGPLTTTSISTNAKFE+RSP R+QIKFEEG+IGTPQLTDSL IPE VEFL
Sbjct: 179 SLSVQNSVLLAGPLTTTSISTNAKFEVRSPNRLQIKFEEGVIGTPQLTDSLEIPETVEFL 238

Query: 236 GQNIDLTPFKGILTSVQDTASSVVRTISNQPPLKIPISGSNAQSWLLTTYLDEELRISRG 295
           GQ IDL+ FK I TS+Q+TASSVV+TIS+QPPLKIPIS S AQSWLLTTYLDEELR++RG
Sbjct: 239 GQEIDLSSFKDIFTSIQNTASSVVQTISDQPPLKIPISNSYAQSWLLTTYLDEELRVARG 298

Query: 296 DGGSVFVLIKEGSSLLTN 313
           DGGSVFVLIKEGSSLLTN
Sbjct: 299 DGGSVFVLIKEGSSLLTN 316


>Medtr5g029590.1 | plastid fibrillin | HC | chr5:12424334-12428740 |
           20130731
          Length = 355

 Score =  186 bits (472), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/220 (49%), Positives = 150/220 (68%), Gaps = 1/220 (0%)

Query: 92  ALVDSFYGTDRGLKATSDTRAVIVELITQLEAKNPTAAPTDALTLLNGKWILAYTSFAGL 151
           ALVD+ YGT+ G +A S+ RA + E + QLEA NPT AP +   LLNG W+L YT+ + L
Sbjct: 136 ALVDTVYGTELGFRAGSEVRAEVSEFVAQLEAANPTPAPVEEPELLNGNWVLLYTASSEL 195

Query: 152 YPLLSRGTFSLVKVEEISQTIDSENFAVENSVRFAGPLTTTSISTNAKFEIRSPKRVQIK 211
            PLL+ G   LVKV++I QTID+ +  V NSV  + P  ++S S +A FE+RSP R+Q+ 
Sbjct: 196 LPLLAAGALPLVKVDKILQTIDTYSSTVVNSVTLSSPFASSSFSASASFEVRSPTRIQVT 255

Query: 212 FEEGIIGTPQLTDSLVIPENVEFLGQNIDLTPFKGILTSVQDTASSVVRTISNQPPLKIP 271
           F+EG +  P++   + +PEN+   GQN+ L P +  L  +++  +++ R IS Q PLKIP
Sbjct: 256 FKEGSLQPPEIKSKIDLPENINIFGQNLSLGPLQQSLGPLENVVANISRVISGQSPLKIP 315

Query: 272 ISGSNAQSWLLTTYLDEELRISRGDGGSVFVLIKEGSSLL 311
           I G    SWLLTTYLD++LRISRGDGG +FVL +EGS +L
Sbjct: 316 IPGERTSSWLLTTYLDKDLRISRGDGG-LFVLAREGSPIL 354


>Medtr1g099880.1 | plastid fibrillin | LC | chr1:45073975-45072484 |
           20130731
          Length = 198

 Score =  136 bits (343), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/143 (54%), Positives = 91/143 (63%), Gaps = 10/143 (6%)

Query: 52  VVIARAKTSDDEWGPEPSSLAAXXXXXXXXXXXXXXXXXXALVDSFYGTDRGLKATSDTR 111
           +   +   +DDEWG EPS+  A                   LV  FYGTD G KA S+TR
Sbjct: 1   MAYVQENANDDEWGSEPSADVAVAEVIVTDIETEKLKKD--LVGLFYGTDHGSKAASETR 58

Query: 112 AVIVELITQLEAKNPTAAPTDALTLLNGKWILAYTSFAGLYPLLSRGTFSLVKVEEISQT 171
           A I ELI+QLEAK PT A TDAL+LL+GKWILAYTS+AGL+PLLS G    ++VEE+SQT
Sbjct: 59  AEIFELISQLEAKFPTPASTDALSLLDGKWILAYTSYAGLFPLLSSGLLPFLEVEELSQT 118

Query: 172 IDSENFAVENSVRFAGPLTTTSI 194
           ID        SV FAGPLTTTSI
Sbjct: 119 ID--------SVLFAGPLTTTSI 133


>Medtr8g092680.1 | plastid lipid-associated protein | HC |
           chr8:38786802-38784455 | 20130731
          Length = 265

 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 43/216 (19%)

Query: 93  LVDSFYGTDRGLKATSDTRAVIVE-LITQLEAKNPTAAPTDALTLLNGKWILAYTSFAGL 151
           L  +  G +RG+      + + +E L+ QLE++NPT  PT  L  ++G W L Y++ + L
Sbjct: 79  LYQALEGINRGIFGIPSGKKLEIETLVKQLESQNPTPEPTLELEKVDGCWRLVYSTISIL 138

Query: 152 YPLLSR-GTFSLVKVEEISQTIDSENFAVENSVRFAGP---LTTTSISTNAKFEIRSPKR 207
               ++ G    + + +  Q ID       N ++F      L    +S  A F+I S  R
Sbjct: 139 GSRRTKLGLRDFIALGDFFQIIDKTKSKAVNVIKFNAKGLILLCGELSIEASFKIASRTR 198

Query: 208 VQIKFEEGIIGTPQLTDSLVIPENVEFLGQNIDLTPFKGILTSVQDTASSVVRTISNQPP 267
           V I FE   I   QL +  V  +N + L          GI                    
Sbjct: 199 VDINFENSTITPDQLMN--VFRKNYDIL---------LGIF------------------- 228

Query: 268 LKIPISGSNAQSWLLTTYLDEELRISRGDGGSVFVL 303
                   N + WL  TY+D+++RI R D G++FVL
Sbjct: 229 --------NPEGWLEITYVDDKMRIGRDDKGNIFVL 256


>Medtr1g054070.1 | plastid lipid-associated protein | HC |
           chr1:23052971-23048464 | 20130731
          Length = 297

 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 19/206 (9%)

Query: 105 KATSDTRAVIVELITQLEAKNPTAAPTDALTLLNGKWILAYTSFAGLYPLLSRGTF---- 160
           K T   R  + E IT LE  NPT  PT +   L G+W   +          +R  F    
Sbjct: 89  KTTEYQRIDVNERITGLERLNPTPRPTTS-PFLEGRWNFEWFGPGSPGLFAARMIFENFP 147

Query: 161 -SLVKVEEISQTIDSENFAVENSVRFAGPLTTTSISTNAKFEIRSPKRVQIKFEEGIIGT 219
            SL  + ++   I   N  +  +  F   + +  I  + K  +  P R++ ++ EGII +
Sbjct: 148 SSLANLSKMDVFIKDGNAKITANTLFLNSVES-RIILSTKLTVEGPLRMKEEYVEGIIVS 206

Query: 220 PQLTDSLVIPENVEFLGQNIDLTPFKGILTSVQDTASSVVRTISNQPPLKIPISGSNAQS 279
           P + +  V  +    LGQ +++   + +   ++D  +           LK+P+SGS  Q 
Sbjct: 207 PTVLEDRVPDQLKGALGQAVNV--LQQLPVPLRDALAD---------GLKVPLSGS-FQR 254

Query: 280 WLLTTYLDEELRISRGDGGSVFVLIK 305
             + +YLDEE+ I R   G   VL +
Sbjct: 255 LFMISYLDEEILIIRNTAGIPEVLTR 280