Miyakogusa Predicted Gene
- Lj6g3v1790930.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1790930.1 tr|G6FQU5|G6FQU5_9CYAN PAP fibrillin family
protein OS=Fischerella sp. JSC-11 GN=FJSC11DRAFT_1242
PE,34.56,9e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; PAP_fibrillin,Plastid lipid-associated pr,CUFF.59942.1
(313 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g025050.1 | plastid lipid-associated protein | HC | chr2:8... 409 e-114
Medtr2g025040.1 | plastid lipid-associated protein | HC | chr2:8... 365 e-101
Medtr5g029590.1 | plastid fibrillin | HC | chr5:12424334-1242874... 186 2e-47
Medtr1g099880.1 | plastid fibrillin | LC | chr1:45073975-4507248... 136 2e-32
Medtr8g092680.1 | plastid lipid-associated protein | HC | chr8:3... 69 4e-12
Medtr1g054070.1 | plastid lipid-associated protein | HC | chr1:2... 49 7e-06
>Medtr2g025050.1 | plastid lipid-associated protein | HC |
chr2:8885310-8882730 | 20130731
Length = 317
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/317 (72%), Positives = 249/317 (78%), Gaps = 4/317 (1%)
Query: 1 MTSISHLNQL-TSRTLPATPLISTASIFPPS-TVGIRSKPVGTPRISAHIPRPVVIARAK 58
M S+S+LNQL + TLP T L ST SI P + TVG +K V P + A R VV +A
Sbjct: 1 MASLSNLNQLLHTNTLPVTSLNSTPSISPSTITVGFLNKHVRKPIVLADGLRRVVYVQAN 60
Query: 59 TSDDEWGPEPSS--LAAXXXXXXXXXXXXXXXXXXALVDSFYGTDRGLKATSDTRAVIVE 116
DDEWGPEPS+ A ALV SFYGTDRGLKATS+TRA IVE
Sbjct: 61 RIDDEWGPEPSAGVAVAEVQATEKVSDGETEKLKKALVGSFYGTDRGLKATSETRAEIVE 120
Query: 117 LITQLEAKNPTAAPTDALTLLNGKWILAYTSFAGLYPLLSRGTFSLVKVEEISQTIDSEN 176
LITQLEAKNPT A TDAL+LLNGKWILAYTSFAGL+PLLS G L+ VEEISQTIDSE+
Sbjct: 121 LITQLEAKNPTPASTDALSLLNGKWILAYTSFAGLFPLLSSGLLPLLTVEEISQTIDSES 180
Query: 177 FAVENSVRFAGPLTTTSISTNAKFEIRSPKRVQIKFEEGIIGTPQLTDSLVIPENVEFLG 236
V+NSV FAGPLTTTSISTNAKFE+RSP R+QIKFEEG+IGTPQLTDSL IPENVE LG
Sbjct: 181 LTVQNSVLFAGPLTTTSISTNAKFEVRSPNRLQIKFEEGVIGTPQLTDSLEIPENVEVLG 240
Query: 237 QNIDLTPFKGILTSVQDTASSVVRTISNQPPLKIPISGSNAQSWLLTTYLDEELRISRGD 296
Q IDL+PFKGI TSVQ+TASSVV+TISNQPPLKIPIS NAQSWLLTTYLDEELRISRGD
Sbjct: 241 QKIDLSPFKGIFTSVQNTASSVVQTISNQPPLKIPISNDNAQSWLLTTYLDEELRISRGD 300
Query: 297 GGSVFVLIKEGSSLLTN 313
GGSVFVLIKEGSSLLTN
Sbjct: 301 GGSVFVLIKEGSSLLTN 317
>Medtr2g025040.1 | plastid lipid-associated protein | HC |
chr2:8881076-8879139 | 20130731
Length = 316
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/318 (66%), Positives = 242/318 (76%), Gaps = 7/318 (2%)
Query: 1 MTSISHLNQLTS-RTLPATPLISTASIFPPS-TVGIRSKPVGTPRISAHIPRPVVIARAK 58
M S+S+LNQL TLP T L ST SI P + T G++SK + A R VV RA
Sbjct: 1 MASLSNLNQLLHINTLPVTSLNSTPSITPSTITFGLQSKNARKSILVADGLRRVVYVRAT 60
Query: 59 TSDD---EWGPEPSSLAAXXXXXXXXXXXXXXXXXXALVDSFYGTDRGLKATSDTRAVIV 115
+DD EWG EPS+ A LV SFYGT RGLKA S+TRA I
Sbjct: 61 ANDDDDDEWGSEPSADVAVAEVIVPESETEKLKKD--LVGSFYGTARGLKAASETRAEIF 118
Query: 116 ELITQLEAKNPTAAPTDALTLLNGKWILAYTSFAGLYPLLSRGTFSLVKVEEISQTIDSE 175
ELI+QLEAKNPT A TDAL+LL+GKWILAYTS+AGL+PLLS G L++VEE+SQTIDSE
Sbjct: 119 ELISQLEAKNPTPASTDALSLLDGKWILAYTSYAGLFPLLSSGLLPLLEVEELSQTIDSE 178
Query: 176 NFAVENSVRFAGPLTTTSISTNAKFEIRSPKRVQIKFEEGIIGTPQLTDSLVIPENVEFL 235
+ +V+NSV AGPLTTTSISTNAKFE+RSP R+QIKFEEG+IGTPQLTDSL IPE VEFL
Sbjct: 179 SLSVQNSVLLAGPLTTTSISTNAKFEVRSPNRLQIKFEEGVIGTPQLTDSLEIPETVEFL 238
Query: 236 GQNIDLTPFKGILTSVQDTASSVVRTISNQPPLKIPISGSNAQSWLLTTYLDEELRISRG 295
GQ IDL+ FK I TS+Q+TASSVV+TIS+QPPLKIPIS S AQSWLLTTYLDEELR++RG
Sbjct: 239 GQEIDLSSFKDIFTSIQNTASSVVQTISDQPPLKIPISNSYAQSWLLTTYLDEELRVARG 298
Query: 296 DGGSVFVLIKEGSSLLTN 313
DGGSVFVLIKEGSSLLTN
Sbjct: 299 DGGSVFVLIKEGSSLLTN 316
>Medtr5g029590.1 | plastid fibrillin | HC | chr5:12424334-12428740 |
20130731
Length = 355
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 150/220 (68%), Gaps = 1/220 (0%)
Query: 92 ALVDSFYGTDRGLKATSDTRAVIVELITQLEAKNPTAAPTDALTLLNGKWILAYTSFAGL 151
ALVD+ YGT+ G +A S+ RA + E + QLEA NPT AP + LLNG W+L YT+ + L
Sbjct: 136 ALVDTVYGTELGFRAGSEVRAEVSEFVAQLEAANPTPAPVEEPELLNGNWVLLYTASSEL 195
Query: 152 YPLLSRGTFSLVKVEEISQTIDSENFAVENSVRFAGPLTTTSISTNAKFEIRSPKRVQIK 211
PLL+ G LVKV++I QTID+ + V NSV + P ++S S +A FE+RSP R+Q+
Sbjct: 196 LPLLAAGALPLVKVDKILQTIDTYSSTVVNSVTLSSPFASSSFSASASFEVRSPTRIQVT 255
Query: 212 FEEGIIGTPQLTDSLVIPENVEFLGQNIDLTPFKGILTSVQDTASSVVRTISNQPPLKIP 271
F+EG + P++ + +PEN+ GQN+ L P + L +++ +++ R IS Q PLKIP
Sbjct: 256 FKEGSLQPPEIKSKIDLPENINIFGQNLSLGPLQQSLGPLENVVANISRVISGQSPLKIP 315
Query: 272 ISGSNAQSWLLTTYLDEELRISRGDGGSVFVLIKEGSSLL 311
I G SWLLTTYLD++LRISRGDGG +FVL +EGS +L
Sbjct: 316 IPGERTSSWLLTTYLDKDLRISRGDGG-LFVLAREGSPIL 354
>Medtr1g099880.1 | plastid fibrillin | LC | chr1:45073975-45072484 |
20130731
Length = 198
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/143 (54%), Positives = 91/143 (63%), Gaps = 10/143 (6%)
Query: 52 VVIARAKTSDDEWGPEPSSLAAXXXXXXXXXXXXXXXXXXALVDSFYGTDRGLKATSDTR 111
+ + +DDEWG EPS+ A LV FYGTD G KA S+TR
Sbjct: 1 MAYVQENANDDEWGSEPSADVAVAEVIVTDIETEKLKKD--LVGLFYGTDHGSKAASETR 58
Query: 112 AVIVELITQLEAKNPTAAPTDALTLLNGKWILAYTSFAGLYPLLSRGTFSLVKVEEISQT 171
A I ELI+QLEAK PT A TDAL+LL+GKWILAYTS+AGL+PLLS G ++VEE+SQT
Sbjct: 59 AEIFELISQLEAKFPTPASTDALSLLDGKWILAYTSYAGLFPLLSSGLLPFLEVEELSQT 118
Query: 172 IDSENFAVENSVRFAGPLTTTSI 194
ID SV FAGPLTTTSI
Sbjct: 119 ID--------SVLFAGPLTTTSI 133
>Medtr8g092680.1 | plastid lipid-associated protein | HC |
chr8:38786802-38784455 | 20130731
Length = 265
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 93 LVDSFYGTDRGLKATSDTRAVIVE-LITQLEAKNPTAAPTDALTLLNGKWILAYTSFAGL 151
L + G +RG+ + + +E L+ QLE++NPT PT L ++G W L Y++ + L
Sbjct: 79 LYQALEGINRGIFGIPSGKKLEIETLVKQLESQNPTPEPTLELEKVDGCWRLVYSTISIL 138
Query: 152 YPLLSR-GTFSLVKVEEISQTIDSENFAVENSVRFAGP---LTTTSISTNAKFEIRSPKR 207
++ G + + + Q ID N ++F L +S A F+I S R
Sbjct: 139 GSRRTKLGLRDFIALGDFFQIIDKTKSKAVNVIKFNAKGLILLCGELSIEASFKIASRTR 198
Query: 208 VQIKFEEGIIGTPQLTDSLVIPENVEFLGQNIDLTPFKGILTSVQDTASSVVRTISNQPP 267
V I FE I QL + V +N + L GI
Sbjct: 199 VDINFENSTITPDQLMN--VFRKNYDIL---------LGIF------------------- 228
Query: 268 LKIPISGSNAQSWLLTTYLDEELRISRGDGGSVFVL 303
N + WL TY+D+++RI R D G++FVL
Sbjct: 229 --------NPEGWLEITYVDDKMRIGRDDKGNIFVL 256
>Medtr1g054070.1 | plastid lipid-associated protein | HC |
chr1:23052971-23048464 | 20130731
Length = 297
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 19/206 (9%)
Query: 105 KATSDTRAVIVELITQLEAKNPTAAPTDALTLLNGKWILAYTSFAGLYPLLSRGTF---- 160
K T R + E IT LE NPT PT + L G+W + +R F
Sbjct: 89 KTTEYQRIDVNERITGLERLNPTPRPTTS-PFLEGRWNFEWFGPGSPGLFAARMIFENFP 147
Query: 161 -SLVKVEEISQTIDSENFAVENSVRFAGPLTTTSISTNAKFEIRSPKRVQIKFEEGIIGT 219
SL + ++ I N + + F + + I + K + P R++ ++ EGII +
Sbjct: 148 SSLANLSKMDVFIKDGNAKITANTLFLNSVES-RIILSTKLTVEGPLRMKEEYVEGIIVS 206
Query: 220 PQLTDSLVIPENVEFLGQNIDLTPFKGILTSVQDTASSVVRTISNQPPLKIPISGSNAQS 279
P + + V + LGQ +++ + + ++D + LK+P+SGS Q
Sbjct: 207 PTVLEDRVPDQLKGALGQAVNV--LQQLPVPLRDALAD---------GLKVPLSGS-FQR 254
Query: 280 WLLTTYLDEELRISRGDGGSVFVLIK 305
+ +YLDEE+ I R G VL +
Sbjct: 255 LFMISYLDEEILIIRNTAGIPEVLTR 280