Miyakogusa Predicted Gene

Lj6g3v1787870.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1787870.2 Non Characterized Hit- tr|I1KZX3|I1KZX3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.58347
PE,85.05,0,seg,NULL; DUF3537,Protein of unknown function DUF3537;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NU,CUFF.59935.2
         (298 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g025160.1 | extracellular ligand-gated ion channel protein...   485   e-137
Medtr2g025160.2 | extracellular ligand-gated ion channel protein...   397   e-111
Medtr3g054010.1 | extracellular ligand-gated ion channel protein...   331   4e-91
Medtr1g009230.1 | extracellular ligand-gated ion channel protein...   175   5e-44
Medtr8g080210.1 | extracellular ligand-gated ion channel protein...   172   4e-43

>Medtr2g025160.1 | extracellular ligand-gated ion channel protein |
           HC | chr2:8949512-8952434 | 20130731
          Length = 431

 Score =  485 bits (1249), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 242/298 (81%), Positives = 257/298 (86%)

Query: 1   MKGTMNLILRWGLPCFIAECAYKIWWYASGTSQIPYYGEIYASSIILGTLELCSWLYRTS 60
           MK TM LIL WGLPCFI +C YKIWWY SG SQIPYYGE+Y S IIL TLELCSW YRTS
Sbjct: 134 MKRTMKLILLWGLPCFICQCVYKIWWYISGASQIPYYGEVYVSGIILCTLELCSWFYRTS 193

Query: 61  IFFLVCVLFRLICYLQILRLDDFAPVFQRETEVGTILLEHLKIRRNLRVISHRFRAFILA 120
           IFFLVCVLFRLI YLQI RLD+FAPVFQRETEVGTILLEHL+IRRNLRVISHRFRAFIL+
Sbjct: 194 IFFLVCVLFRLIGYLQIQRLDEFAPVFQRETEVGTILLEHLRIRRNLRVISHRFRAFILS 253

Query: 121 SLLLVTASQLIFLLMATRTGADVDILKAGELALVSITLVSGLFILLRSATKITHKAQSIT 180
           SLLLVTASQLIFLLM  +  ADVDILK GEL LVSITLVSGL+ILLRSATKITHKAQS+T
Sbjct: 254 SLLLVTASQLIFLLMVIKPHADVDILKGGELGLVSITLVSGLYILLRSATKITHKAQSLT 313

Query: 181 SLAAKWHICATINTFDNLDGETPTTQRASAQAMAPHINWGSSXXXXXXXXXXXXNTKLLP 240
            LA+KWHICATIN+FDN+DGETPT   ASAQAMA  I+WGSS            NTK++P
Sbjct: 314 GLASKWHICATINSFDNIDGETPTALIASAQAMAADISWGSSEDESGDEEDELNNTKMMP 373

Query: 241 IYAHTISFHKRQALVTYMENNRAGITVFGFMLDRTWLHSIFAIQLALCLWLLNKTVGI 298
           I   TISFHKRQALVTYMENNRAGITV+GFMLDRTWLHSIF IQLALCLWLLNKTVGI
Sbjct: 374 IQTRTISFHKRQALVTYMENNRAGITVYGFMLDRTWLHSIFGIQLALCLWLLNKTVGI 431


>Medtr2g025160.2 | extracellular ligand-gated ion channel protein |
           HC | chr2:8949512-8952434 | 20130731
          Length = 408

 Score =  397 bits (1021), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 200/254 (78%), Positives = 214/254 (84%)

Query: 1   MKGTMNLILRWGLPCFIAECAYKIWWYASGTSQIPYYGEIYASSIILGTLELCSWLYRTS 60
           MK TM LIL WGLPCFI +C YKIWWY SG SQIPYYGE+Y S IIL TLELCSW YRTS
Sbjct: 134 MKRTMKLILLWGLPCFICQCVYKIWWYISGASQIPYYGEVYVSGIILCTLELCSWFYRTS 193

Query: 61  IFFLVCVLFRLICYLQILRLDDFAPVFQRETEVGTILLEHLKIRRNLRVISHRFRAFILA 120
           IFFLVCVLFRLI YLQI RLD+FAPVFQRETEVGTILLEHL+IRRNLRVISHRFRAFIL+
Sbjct: 194 IFFLVCVLFRLIGYLQIQRLDEFAPVFQRETEVGTILLEHLRIRRNLRVISHRFRAFILS 253

Query: 121 SLLLVTASQLIFLLMATRTGADVDILKAGELALVSITLVSGLFILLRSATKITHKAQSIT 180
           SLLLVTASQLIFLLM  +  ADVDILK GEL LVSITLVSGL+ILLRSATKITHKAQS+T
Sbjct: 254 SLLLVTASQLIFLLMVIKPHADVDILKGGELGLVSITLVSGLYILLRSATKITHKAQSLT 313

Query: 181 SLAAKWHICATINTFDNLDGETPTTQRASAQAMAPHINWGSSXXXXXXXXXXXXNTKLLP 240
            LA+KWHICATIN+FDN+DGETPT   ASAQAMA  I+WGSS            NTK++P
Sbjct: 314 GLASKWHICATINSFDNIDGETPTALIASAQAMAADISWGSSEDESGDEEDELNNTKMMP 373

Query: 241 IYAHTISFHKRQAL 254
           I   TISFHKRQAL
Sbjct: 374 IQTRTISFHKRQAL 387


>Medtr3g054010.1 | extracellular ligand-gated ion channel protein |
           HC | chr3:21416001-21420848 | 20130731
          Length = 450

 Score =  331 bits (849), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 165/301 (54%), Positives = 220/301 (73%), Gaps = 5/301 (1%)

Query: 1   MKGTMNLILRWGLPCFIAECAYKIWWYASGTSQIPYYGEIYASSIILGTLELCSWLYRTS 60
           +  ++ LI  +  PCFIA   YKIWWYASG SQIP+ G +Y S  +   LELCSWLYRT+
Sbjct: 149 LNRSLKLISVFSGPCFIAMATYKIWWYASGGSQIPFLGNVYLSDAVACILELCSWLYRTT 208

Query: 61  IFFLVCVLFRLICYLQILRLDDFAPVFQRETEVGTILLEHLKIRRNLRVISHRFRAFILA 120
             FLVCVLFRLIC+LQILRL DFA +F  +++V +++ EHL+IRR+LR+ISHR+RAFIL 
Sbjct: 209 TIFLVCVLFRLICHLQILRLKDFATLFHVDSDVHSVMSEHLRIRRHLRIISHRYRAFILL 268

Query: 121 SLLLVTASQLIFLLMATRTGADVDILKAGELALVSITLVSGLFILLRSATKITHKAQSIT 180
           +L+LVT SQ   LL+  +   D+++ K GELAL S+TL+S L I+ RSATKITHKAQ+IT
Sbjct: 269 ALVLVTGSQFACLLVTMKARHDLNVYKTGELALCSVTLLSALSIMFRSATKITHKAQAIT 328

Query: 181 SLAAKWHICATINTFDNL-DGETPTTQRASAQAMAPHI--NWGSSXXXXXXXXXXXXNTK 237
            LAAKWH+CAT+++FD + +GET + Q  S + + P +  +  S              TK
Sbjct: 329 GLAAKWHVCATLDSFDGVGEGETLSAQ-ISRERIYPSVGTDGESETDDAGSEEDEIDTTK 387

Query: 238 LLPIYAH-TISFHKRQALVTYMENNRAGITVFGFMLDRTWLHSIFAIQLALCLWLLNKTV 296
           ++P Y++ TIS+ KRQALV Y ENN+AGITV+GFMLDR+ LH+IF I+++L LWLL KT+
Sbjct: 388 MIPSYSYSTISYQKRQALVNYFENNKAGITVYGFMLDRSTLHTIFGIEMSLVLWLLGKTI 447

Query: 297 G 297
           G
Sbjct: 448 G 448


>Medtr1g009230.1 | extracellular ligand-gated ion channel protein |
           HC | chr1:1241261-1238758 | 20130731
          Length = 446

 Score =  175 bits (443), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 100/285 (35%), Positives = 158/285 (55%), Gaps = 17/285 (5%)

Query: 13  LPCFIAECAYKIWWYASGTSQIPYYGEIYASSIILGTLELCSWLYRTSIFFLVCVLFRLI 72
           LP F  E A+KI ++++     P     +    I+    L SWLYRT ++ LVCV+F+L 
Sbjct: 175 LPSFFVELAHKIIFFSAVKISAPNLSAGFPLHSIVFVFMLLSWLYRTGVYLLVCVIFKLT 234

Query: 73  CYLQILRLDDFAPVFQR-ETEVGTILLEHLKIRRNLRVISHRFRAFILASLLLVTASQLI 131
           C LQILR +    +F+   +E G I  EH++IRR L +ISHR+R FI+  ++ ++ SQL 
Sbjct: 235 CQLQILRFEGVHKLFEGCGSEAGVIFKEHVRIRRQLWIISHRYRFFIICCVVTMSVSQLG 294

Query: 132 FLLMATRTGADVDILKAGELALVSITLVSGLFILLRSATKITHKAQSITSLAAKWHICAT 191
            LL+   + ++     +G+L + S   +SG F+ +  A KITH+AQ I S+A +WH+  T
Sbjct: 295 SLLLVLASKSEKTFFNSGDLVICSAVQLSGFFLCILGAAKITHRAQGIVSIATRWHMLVT 354

Query: 192 INTFDNLDGETPTTQRASAQAMAPHINWGSSXXXXXXXXXXXXNTKLLPIYAHTISFHKR 251
                N   E+   +   ++A+A   +   S            +           SF  R
Sbjct: 355 -----NAFAESEQCKDNMSEALASDSSDSDSSDIHISIIPQRLS-----------SFQTR 398

Query: 252 QALVTYMENNRAGITVFGFMLDRTWLHSIFAIQLALCLWLLNKTV 296
           Q+LVTY+++N  GIT++GF LDR  LH++FA + ++ LW+L+K V
Sbjct: 399 QSLVTYLQHNHGGITLYGFALDRGMLHTLFAFEFSIVLWILSKVV 443


>Medtr8g080210.1 | extracellular ligand-gated ion channel protein |
           HC | chr8:34461075-34457370 | 20130731
          Length = 498

 Score =  172 bits (435), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 173/300 (57%), Gaps = 20/300 (6%)

Query: 1   MKGTMNLILRWGLPCFIAECAYKIWWYASGTSQIPY--YGEIYASSIILGTLELCSWLYR 58
           + G++ L + W  PCF+ +   +I        +I Y  +G  +  SI +    + SW Y 
Sbjct: 159 ISGSLRLFILWVFPCFLLKTVREII-------RISYIQHGS-WGFSIAIFIALVVSWTYV 210

Query: 59  TSIFFLVCVLFRLICYLQILRLDDFAPVFQRETEVGTILLEHLKIRRNLRVISHRFRAFI 118
           ++I    C++F L+C LQ++  DD+  + +RE++V   L EH+++R +L  ISHRFR ++
Sbjct: 211 SAISLTACIMFHLVCNLQVIHFDDYGKLLERESDVLVFLEEHMRLRYHLSKISHRFRVYL 270

Query: 119 LASLLLVTASQLIFLLMATRTGADVDILKAGELALVSITLVSGLFILLRSATKITHKAQS 178
           L   L+VT SQ++ LL  T     + ++  G+ A+ ++  V G+ I L +AT+I+H+AQ 
Sbjct: 271 LLEFLVVTVSQVVTLLQITGYRDMITMVNGGDFAVSTLVQVVGIIICLHAATRISHRAQG 330

Query: 179 ITSLAAKWHICATINTFDNLDGETPTTQRASAQAMAPHIN-----WGSSXXXXXXXXXXX 233
           + SLA++WH  AT  + DN   +  ++  A +  +A H+N     +  S           
Sbjct: 331 VVSLASRWHAIATCASSDN--SQMRSSASAGSLEVANHLNSIHLDYSESDLESLDFGGMA 388

Query: 234 XNTKLLPIYAHTISFHKRQALVTYMENNRAGITVFGFMLDRTWLHSIFAIQLALCLWLLN 293
            NT+L+   ++  S HKRQA V Y+++N  GIT+FG+ +DR+ +++IF ++L+L  ++L+
Sbjct: 389 VNTQLI---SYMSSHHKRQAFVMYLQSNPGGITIFGWTVDRSLVNTIFFLELSLVTFVLD 445