Miyakogusa Predicted Gene

Lj6g3v1787850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1787850.1 Non Characterized Hit- tr|I1KZX3|I1KZX3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.58347
PE,73.85,0,DUF3537,Protein of unknown function DUF3537; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL,gene.g66726.t1.1
         (290 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g025160.1 | extracellular ligand-gated ion channel protein...   399   e-111
Medtr2g025160.2 | extracellular ligand-gated ion channel protein...   398   e-111
Medtr3g054010.1 | extracellular ligand-gated ion channel protein...   273   1e-73
Medtr1g009230.1 | extracellular ligand-gated ion channel protein...   140   2e-33
Medtr8g080210.1 | extracellular ligand-gated ion channel protein...   127   1e-29

>Medtr2g025160.1 | extracellular ligand-gated ion channel protein |
           HC | chr2:8949512-8952434 | 20130731
          Length = 431

 Score =  399 bits (1024), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 189/267 (70%), Positives = 227/267 (85%), Gaps = 1/267 (0%)

Query: 15  HDLEQRSKKFRSYLRWVFVVQSNIYKSVLSWSVFFTLTFIVPVMSQYLLHCRTACDANHR 74
           HD ++  ++FR+YLRWV+V QSN+ K+ +SWSVFFTL ++VP++S +LL C T CDA+HR
Sbjct: 21  HDGKEL-RRFRAYLRWVYVDQSNLCKAGISWSVFFTLAYVVPILSHFLLDCSTTCDADHR 79

Query: 75  RPYHIPVQISLTVFATLSFICLSRWDRKYGLSKFLFLDKVSNENLKIQRGYAEQMQGTMK 134
           RPYH+PVQISL+VFATLSFI LS+WDRKYG SKFLFLDKVS+E+LKIQRGYA QM+ TMK
Sbjct: 80  RPYHVPVQISLSVFATLSFISLSKWDRKYGFSKFLFLDKVSDESLKIQRGYAIQMKRTMK 139

Query: 135 LILRVGLPCFLAACADKIWWYVSGASQIPYYGEMHASSIILCALELWSWLYRTSIFFAVC 194
           LIL  GLPCF+  C  KIWWY+SGASQIPYYGE++ S IILC LEL SW YRTSIFF VC
Sbjct: 140 LILLWGLPCFICQCVYKIWWYISGASQIPYYGEVYVSGIILCTLELCSWFYRTSIFFLVC 199

Query: 195 VLFRLICSLQILKLDELAIVFQRKTEVESILLEHQRIKRNLQIISHRFRSFILASMLLVS 254
           VLFRLI  LQI +LDE A VFQR+TEV +ILLEH RI+RNL++ISHRFR+FIL+S+LLV+
Sbjct: 200 VLFRLIGYLQIQRLDEFAPVFQRETEVGTILLEHLRIRRNLRVISHRFRAFILSSLLLVT 259

Query: 255 ASQFSFLLMATKPHADVNVLKAGELAV 281
           ASQ  FLLM  KPHADV++LK GEL +
Sbjct: 260 ASQLIFLLMVIKPHADVDILKGGELGL 286


>Medtr2g025160.2 | extracellular ligand-gated ion channel protein |
           HC | chr2:8949512-8952434 | 20130731
          Length = 408

 Score =  398 bits (1022), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 189/267 (70%), Positives = 226/267 (84%), Gaps = 1/267 (0%)

Query: 15  HDLEQRSKKFRSYLRWVFVVQSNIYKSVLSWSVFFTLTFIVPVMSQYLLHCRTACDANHR 74
           HD  +  ++FR+YLRWV+V QSN+ K+ +SWSVFFTL ++VP++S +LL C T CDA+HR
Sbjct: 21  HD-GKELRRFRAYLRWVYVDQSNLCKAGISWSVFFTLAYVVPILSHFLLDCSTTCDADHR 79

Query: 75  RPYHIPVQISLTVFATLSFICLSRWDRKYGLSKFLFLDKVSNENLKIQRGYAEQMQGTMK 134
           RPYH+PVQISL+VFATLSFI LS+WDRKYG SKFLFLDKVS+E+LKIQRGYA QM+ TMK
Sbjct: 80  RPYHVPVQISLSVFATLSFISLSKWDRKYGFSKFLFLDKVSDESLKIQRGYAIQMKRTMK 139

Query: 135 LILRVGLPCFLAACADKIWWYVSGASQIPYYGEMHASSIILCALELWSWLYRTSIFFAVC 194
           LIL  GLPCF+  C  KIWWY+SGASQIPYYGE++ S IILC LEL SW YRTSIFF VC
Sbjct: 140 LILLWGLPCFICQCVYKIWWYISGASQIPYYGEVYVSGIILCTLELCSWFYRTSIFFLVC 199

Query: 195 VLFRLICSLQILKLDELAIVFQRKTEVESILLEHQRIKRNLQIISHRFRSFILASMLLVS 254
           VLFRLI  LQI +LDE A VFQR+TEV +ILLEH RI+RNL++ISHRFR+FIL+S+LLV+
Sbjct: 200 VLFRLIGYLQIQRLDEFAPVFQRETEVGTILLEHLRIRRNLRVISHRFRAFILSSLLLVT 259

Query: 255 ASQFSFLLMATKPHADVNVLKAGELAV 281
           ASQ  FLLM  KPHADV++LK GEL +
Sbjct: 260 ASQLIFLLMVIKPHADVDILKGGELGL 286


>Medtr3g054010.1 | extracellular ligand-gated ion channel protein |
           HC | chr3:21416001-21420848 | 20130731
          Length = 450

 Score =  273 bits (699), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 134/258 (51%), Positives = 177/258 (68%), Gaps = 1/258 (0%)

Query: 24  FRSYLRWVFVVQSNIYKSVLSWSVFFTLTFIVPVMSQYLLHCRTACDANHRRPYHIPVQI 83
           FRSYLRW+ V QSN   + LSW VFF     VP +S + L C   CDA H RPY   VQI
Sbjct: 45  FRSYLRWMCVDQSNAIHATLSWFVFFVFALAVPALSHFFLACED-CDARHSRPYDSVVQI 103

Query: 84  SLTVFATLSFICLSRWDRKYGLSKFLFLDKVSNENLKIQRGYAEQMQGTMKLILRVGLPC 143
           SL+  A LSF+CLS + +KYGL +FLFLDK+ +E+  ++  Y  Q+  ++KLI     PC
Sbjct: 104 SLSSVAVLSFLCLSTFVKKYGLRRFLFLDKLCDESENVRMNYMVQLNRSLKLISVFSGPC 163

Query: 144 FLAACADKIWWYVSGASQIPYYGEMHASSIILCALELWSWLYRTSIFFAVCVLFRLICSL 203
           F+A    KIWWY SG SQIP+ G ++ S  + C LEL SWLYRT+  F VCVLFRLIC L
Sbjct: 164 FIAMATYKIWWYASGGSQIPFLGNVYLSDAVACILELCSWLYRTTTIFLVCVLFRLICHL 223

Query: 204 QILKLDELAIVFQRKTEVESILLEHQRIKRNLQIISHRFRSFILASMLLVSASQFSFLLM 263
           QIL+L + A +F   ++V S++ EH RI+R+L+IISHR+R+FIL +++LV+ SQF+ LL+
Sbjct: 224 QILRLKDFATLFHVDSDVHSVMSEHLRIRRHLRIISHRYRAFILLALVLVTGSQFACLLV 283

Query: 264 ATKPHADVNVLKAGELAV 281
             K   D+NV K GELA+
Sbjct: 284 TMKARHDLNVYKTGELAL 301


>Medtr1g009230.1 | extracellular ligand-gated ion channel protein |
           HC | chr1:1241261-1238758 | 20130731
          Length = 446

 Score =  140 bits (352), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 136/261 (52%), Gaps = 1/261 (0%)

Query: 22  KKFRSYLRWVFVVQSNIYKSVLSWSVFFTLTFIVPVMSQYLLHCRTACDANHRRPYHIPV 81
           + FR  L+W  +  S+    ++S+  F  LTF+VP+ +   +    +         +  V
Sbjct: 56  RNFRICLKWCALDHSSCVGKLISYVSFIFLTFVVPLFTTLFVQVSASSPEVDPISLNKLV 115

Query: 82  QISLTVFATLSFICLSRWDRKYGLSKFLFLDKVSNENLKIQRGYAEQMQGTMKLILRVGL 141
           QI  +  A +SF  L R+ R+YGL + LFLD + ++   ++RGYA +++   + +  + L
Sbjct: 116 QIPESALAIISFFTLYRFFRRYGLRQLLFLDALQDDTTYVRRGYARELEKAFRYLAYIIL 175

Query: 142 PCFLAACADKIWWYVSGASQIPYYGEMHASSIILCALELWSWLYRTSIFFAVCVLFRLIC 201
           P F    A KI ++ +     P          I+    L SWLYRT ++  VCV+F+L C
Sbjct: 176 PSFFVELAHKIIFFSAVKISAPNLSAGFPLHSIVFVFMLLSWLYRTGVYLLVCVIFKLTC 235

Query: 202 SLQILKLDELAIVFQR-KTEVESILLEHQRIKRNLQIISHRFRSFILASMLLVSASQFSF 260
            LQIL+ + +  +F+   +E   I  EH RI+R L IISHR+R FI+  ++ +S SQ   
Sbjct: 236 QLQILRFEGVHKLFEGCGSEAGVIFKEHVRIRRQLWIISHRYRFFIICCVVTMSVSQLGS 295

Query: 261 LLMATKPHADVNVLKAGELAV 281
           LL+     ++     +G+L +
Sbjct: 296 LLLVLASKSEKTFFNSGDLVI 316


>Medtr8g080210.1 | extracellular ligand-gated ion channel protein |
           HC | chr8:34461075-34457370 | 20130731
          Length = 498

 Score =  127 bits (319), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 130/249 (52%), Gaps = 11/249 (4%)

Query: 37  NIYKSVLSWSVFFTLTFIVPVMSQYLLHCRTACDANHRRPYHIPVQISLTVFATLSFICL 96
           +I  S++ WS FFTL   VP+++ ++  C + C+        + +       A +S +CL
Sbjct: 68  SILSSIICWSGFFTLGVAVPLVALWMGDC-SECEKYELSGCEMVIVAFQASLAAVSLLCL 126

Query: 97  SRWDRKYGLSKFLFLDKVSNENLKIQRGYAEQMQGTMKLILRVGLPCFLAACADKIWWYV 156
           S   RKYGL +FLF+D+ +       R Y  Q+ G+++L +    PCFL     +I    
Sbjct: 127 SHCLRKYGLRRFLFVDRYTGHIAAFHRDYVNQISGSLRLFILWVFPCFLLKTVREII--- 183

Query: 157 SGASQIPY--YGEMHASSIILCALELWSWLYRTSIFFAVCVLFRLICSLQILKLDELAIV 214
               +I Y  +G    S  I  AL + SW Y ++I    C++F L+C+LQ++  D+   +
Sbjct: 184 ----RISYIQHGSWGFSIAIFIAL-VVSWTYVSAISLTACIMFHLVCNLQVIHFDDYGKL 238

Query: 215 FQRKTEVESILLEHQRIKRNLQIISHRFRSFILASMLLVSASQFSFLLMATKPHADVNVL 274
            +R+++V   L EH R++ +L  ISHRFR ++L   L+V+ SQ   LL  T     + ++
Sbjct: 239 LERESDVLVFLEEHMRLRYHLSKISHRFRVYLLLEFLVVTVSQVVTLLQITGYRDMITMV 298

Query: 275 KAGELAVKA 283
             G+ AV  
Sbjct: 299 NGGDFAVST 307