Miyakogusa Predicted Gene

Lj6g3v1786780.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1786780.1 Non Characterized Hit- tr|C6T475|C6T475_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,82.76,3e-19,seg,NULL; coiled-coil,NULL,CUFF.59929.1
         (86 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g025490.1 | hypothetical protein | HC | chr2:9103841-90975...    64   3e-11

>Medtr2g025490.1 | hypothetical protein | HC | chr2:9103841-9097566
           | 20130731
          Length = 208

 Score = 63.9 bits (154), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/58 (60%), Positives = 36/58 (62%)

Query: 4   VAVLXXXXXXXXXXXXXXXXXXXSKPIDVDSSAAEPTQKNETLDEKPDINDVPMEESE 61
           VAVL                   S PI+ DSSAAEPT KNETLDEKPDINDVPMEESE
Sbjct: 109 VAVLEEQKNEATEDEVAEKVEDESNPIEADSSAAEPTSKNETLDEKPDINDVPMEESE 166