Miyakogusa Predicted Gene
- Lj6g3v1786750.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1786750.1 tr|B9N8I4|B9N8I4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_584752 PE=4
SV=1,46.39,8e-19,DUF506,Protein of unknown function DUF506,
plant,CUFF.59926.1
(100 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g025520.1 | DUF506 family protein | HC | chr2:9117344-9115... 151 2e-37
Medtr4g132963.1 | DUF506 family protein | HC | chr4:55623578-556... 114 2e-26
Medtr4g132940.1 | DUF506 family protein | HC | chr4:55616274-556... 114 2e-26
Medtr4g132970.1 | DUF506 family protein | HC | chr4:55631124-556... 114 3e-26
Medtr8g012240.1 | DUF506 family protein | HC | chr8:3421507-3420... 59 7e-10
Medtr8g093440.1 | DUF506 family protein | HC | chr8:39027454-390... 51 3e-07
Medtr8g093440.2 | DUF506 family protein | HC | chr8:39027454-390... 50 3e-07
Medtr4g088770.1 | plant-specific domain TIGR01615 family protein... 50 7e-07
Medtr4g088760.1 | plant/F8B4-180 protein | HC | chr4:35366870-35... 50 7e-07
Medtr7g053310.1 | DUF506 family protein | HC | chr7:18758577-187... 49 1e-06
Medtr1g041155.1 | DUF506 family protein | HC | chr1:15289220-152... 48 3e-06
Medtr4g078310.1 | DUF506 family protein | HC | chr4:30173251-301... 47 3e-06
Medtr7g095960.1 | DUF506 family protein | HC | chr7:38475027-384... 47 3e-06
>Medtr2g025520.1 | DUF506 family protein | HC | chr2:9117344-9115581
| 20130731
Length = 321
Score = 151 bits (381), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 81/99 (81%), Gaps = 1/99 (1%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSNAVASRKATSTVSPDSLFPKRSI 60
MCSAIKGSMKK DLH+PPWRRN YMQ KWFSSYKRT+NAVA+ KA+S S +S PK+ +
Sbjct: 223 MCSAIKGSMKKMDLHIPPWRRNLYMQTKWFSSYKRTTNAVATIKASSHFSVESFCPKKFM 282
Query: 61 GFEARPVKAYNCREHYVS-KTGFRIGHLTAAFNSDSFGM 98
GFEAR VKAYNCR+ YV GFR+GHL AA NSD+FG+
Sbjct: 283 GFEARHVKAYNCRDDYVGINNGFRVGHLAAALNSDNFGL 321
>Medtr4g132963.1 | DUF506 family protein | HC |
chr4:55623578-55622354 | 20130731
Length = 284
Score = 114 bits (284), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 15/95 (15%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSNAVASRKATSTVSPDSLFPKRSI 60
MCSAIK SMK D+H+PPWRRN+YMQAKWF++YKRT+N VA+ K SI
Sbjct: 204 MCSAIKDSMKTMDMHVPPWRRNSYMQAKWFNTYKRTTNEVATNK--------------SI 249
Query: 61 GFEARPVKAYNCRE-HYVSKTGFRIGHLTAAFNSD 94
FEARP+KAYNC++ +Y SK R+GHL A FN +
Sbjct: 250 TFEARPLKAYNCKDVYYGSKIAVRVGHLAAKFNVE 284
>Medtr4g132940.1 | DUF506 family protein | HC |
chr4:55616274-55615094 | 20130731
Length = 284
Score = 114 bits (284), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 15/95 (15%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSNAVASRKATSTVSPDSLFPKRSI 60
MCSAIK SMK D+H+PPWRRN+YMQAKWF++YKRT+N VA+ K SI
Sbjct: 204 MCSAIKDSMKTMDMHVPPWRRNSYMQAKWFNTYKRTTNEVATNK--------------SI 249
Query: 61 GFEARPVKAYNCRE-HYVSKTGFRIGHLTAAFNSD 94
FEARP+KAYNC++ +Y SK R+GHL A FN +
Sbjct: 250 TFEARPLKAYNCKDVYYGSKIAVRVGHLAAKFNVE 284
>Medtr4g132970.1 | DUF506 family protein | HC |
chr4:55631124-55629660 | 20130731
Length = 305
Score = 114 bits (284), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 15/95 (15%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSNAVASRKATSTVSPDSLFPKRSI 60
MCSAIK SMK D+H+PPWRRN+YMQAKWF++YKRT+N VA+ K SI
Sbjct: 225 MCSAIKDSMKTMDMHVPPWRRNSYMQAKWFNTYKRTTNEVATNK--------------SI 270
Query: 61 GFEARPVKAYNCRE-HYVSKTGFRIGHLTAAFNSD 94
FEARP+KAYNC++ +Y SK R+GHL A FN +
Sbjct: 271 TFEARPLKAYNCKDVYYGSKIAVRVGHLAAKFNVE 305
>Medtr8g012240.1 | DUF506 family protein | HC | chr8:3421507-3420014
| 20130731
Length = 305
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSNAVASRKATSTVSPDSLFPKRSI 60
+C A+K ++ L +PPWR+N YMQ KWF Y+RT+N V VS S R +
Sbjct: 227 LCGAVKLCLRSRGLSIPPWRKNRYMQNKWFGPYRRTTNPVHGNPVPDVVSSFSGVKCRLV 286
Query: 61 GFE 63
GF+
Sbjct: 287 GFD 289
>Medtr8g093440.1 | DUF506 family protein | HC |
chr8:39027454-39025942 | 20130731
Length = 270
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSNAVAS 42
+CSA K S+++ LH+PPWR YMQ+KW S ++ N V
Sbjct: 178 LCSAAKQSLREKGLHVPPWRTTTYMQSKWLSGCRKEPNPVGD 219
>Medtr8g093440.2 | DUF506 family protein | HC |
chr8:39027454-39025942 | 20130731
Length = 208
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSNAVAS 42
+CSA K S+++ LH+PPWR YMQ+KW S ++ N V
Sbjct: 116 LCSAAKQSLREKGLHVPPWRTTTYMQSKWLSGCRKEPNPVGD 157
>Medtr4g088770.1 | plant-specific domain TIGR01615 family protein |
HC | chr4:35374567-35372760 | 20130731
Length = 324
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 9/66 (13%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSNAVASRKATSTVSPDSLFPKRSI 60
MC A K +K++ +H+ PWR++ YMQAKW +KR TST S + +R+I
Sbjct: 244 MCMAAKRCLKENKMHMGPWRKHKYMQAKWLGPFKRN---------TSTNSLSLGYSERNI 294
Query: 61 GFEARP 66
+ +P
Sbjct: 295 NPKQKP 300
>Medtr4g088760.1 | plant/F8B4-180 protein | HC |
chr4:35366870-35364703 | 20130731
Length = 376
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 9/66 (13%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSNAVASRKATSTVSPDSLFPKRSI 60
MC A K +K++ +H+ PWR++ YMQAKW +KR TST S + +R+I
Sbjct: 297 MCMAAKRCLKENKMHMGPWRKHKYMQAKWLGPFKRN---------TSTNSLSLGYSERNI 347
Query: 61 GFEARP 66
+ +P
Sbjct: 348 NPKQKP 353
>Medtr7g053310.1 | DUF506 family protein | HC |
chr7:18758577-18757455 | 20130731
Length = 289
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSNAVASR 43
+C A+K K + +PPWR+N +MQ KWF KRT N V +
Sbjct: 215 VCDAVKRCFKSKEASIPPWRKNRFMQNKWFGPSKRTVNPVQGK 257
>Medtr1g041155.1 | DUF506 family protein | HC |
chr1:15289220-15287020 | 20130731
Length = 357
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 4 AIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSNAVASRKATSTVS 50
A K S+KK +H+PPWR+ YM AKW S S V+ A TVS
Sbjct: 245 AAKQSLKKKGMHVPPWRKRDYMLAKWISPSAARSKQVSDAAAVETVS 291
>Medtr4g078310.1 | DUF506 family protein | HC |
chr4:30173251-30174822 | 20130731
Length = 290
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKW 29
MCSA K MK+ LHL PWR+ YMQAKW
Sbjct: 215 MCSAAKKCMKEKKLHLGPWRKQKYMQAKW 243
>Medtr7g095960.1 | DUF506 family protein | HC |
chr7:38475027-38476955 | 20130731
Length = 356
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 4 AIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTS 37
A K S+KK LH+PPWR+ Y+++KWFS Y R +
Sbjct: 252 AAKQSLKKKGLHVPPWRKLEYVRSKWFSPYTRIT 285