Miyakogusa Predicted Gene

Lj6g3v1776660.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1776660.1 Non Characterized Hit- tr|A9P8D3|A9P8D3_POPTR
Putative uncharacterized protein OS=Populus
trichocarp,65.22,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.59960.1
         (255 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g025190.1 | ubiquitin-specific protease family C19 protein...   432   e-121
Medtr4g005510.1 | ubiquitin-specific protease family C19 protein...   322   3e-88
Medtr4g007930.1 | ubiquitin-specific protease family C19 protein...   313   7e-86
Medtr4g007930.3 | ubiquitin-specific protease family C19 protein...   313   8e-86
Medtr4g007930.2 | ubiquitin-specific protease family C19 protein...   313   8e-86
Medtr4g007930.4 | ubiquitin-specific protease family C19 protein...   313   8e-86
Medtr4g094505.1 | ubiquitin-specific protease family C19 protein...   162   2e-40
Medtr8g106490.1 | ubiquitin-specific protease family C19 protein...    90   3e-18

>Medtr2g025190.1 | ubiquitin-specific protease family C19 protein |
           HC | chr2:8970982-8965110 | 20130731
          Length = 428

 Score =  432 bits (1111), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 203/232 (87%), Positives = 220/232 (94%)

Query: 24  GIIVPVVVLMIWNCCWGRRGLLGFVKRYPDAELRGAIDGQYVKVTGVVTCGSIPLESSYQ 83
           G+IVPV+VL+IWNC  GR+GLLGFVKRYPDAELRGAIDGQYVKVTGVVTCGSIPLESSYQ
Sbjct: 197 GVIVPVLVLIIWNCVLGRKGLLGFVKRYPDAELRGAIDGQYVKVTGVVTCGSIPLESSYQ 256

Query: 84  RVPRCVYVSTELFEYKGLGGTSANPKHRCLSWGSRYSEKYVADFYISDFQTGLRALVKAG 143
           R+PRCVYVS+EL+EYKG GG SA+PKHRC +WGSRYSEKY+ADFYISDFQTGLRALVKAG
Sbjct: 257 RIPRCVYVSSELYEYKGWGGKSAHPKHRCFTWGSRYSEKYIADFYISDFQTGLRALVKAG 316

Query: 144 YGAKVAPFVNPTTVVDVTKGNRELSPNFVGWLADRKLSSDDRIMRLKEGYIKEGSTVSVM 203
           YG KVAPFV PTTVVDVTK NRELSPNF+GWLADRKLS+DDRIMRLKEG+IKEGSTVSVM
Sbjct: 317 YGNKVAPFVKPTTVVDVTKENRELSPNFLGWLADRKLSTDDRIMRLKEGHIKEGSTVSVM 376

Query: 204 GVVRRHDNVLMIVPSTEPVSTGCQWLRCLLPTYAEGLILTCEDNQNSDVIPV 255
           GVVRRH+NVLMIVP TEPVSTGCQW+RCLLPT  EGLI+TCEDNQN+DVI V
Sbjct: 377 GVVRRHENVLMIVPPTEPVSTGCQWMRCLLPTGVEGLIITCEDNQNADVIAV 428


>Medtr4g005510.1 | ubiquitin-specific protease family C19 protein |
           HC | chr4:304076-299651 | 20130731
          Length = 478

 Score =  322 bits (824), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 142/231 (61%), Positives = 182/231 (78%)

Query: 25  IIVPVVVLMIWNCCWGRRGLLGFVKRYPDAELRGAIDGQYVKVTGVVTCGSIPLESSYQR 84
           +   V  L  WN C GR+ ++GF+ +YPDAELR A +GQ+VKV+GVVTCG++PLESS+Q+
Sbjct: 248 LFAAVAALFTWNSCRGRKAIVGFISQYPDAELRTAKNGQFVKVSGVVTCGNVPLESSFQK 307

Query: 85  VPRCVYVSTELFEYKGLGGTSANPKHRCLSWGSRYSEKYVADFYISDFQTGLRALVKAGY 144
           VPRCVY ST L+EY+G    +AN KHR  +WG R +E++V DFYISDFQ+GLRALVK G+
Sbjct: 308 VPRCVYTSTSLYEYRGWDSKAANSKHRRFTWGLRSTERHVVDFYISDFQSGLRALVKTGF 367

Query: 145 GAKVAPFVNPTTVVDVTKGNRELSPNFVGWLADRKLSSDDRIMRLKEGYIKEGSTVSVMG 204
           GA+V P+V+ + V+DV   N+++SP+F+ WL  R LSSDDRIM+LKEGYIKEGSTVSVMG
Sbjct: 368 GARVTPYVDDSVVIDVNPENKDMSPDFLRWLGKRNLSSDDRIMQLKEGYIKEGSTVSVMG 427

Query: 205 VVRRHDNVLMIVPSTEPVSTGCQWLRCLLPTYAEGLILTCEDNQNSDVIPV 255
           VV R+DNVLMIVP  EP++TGCQW +C+ P   EG++L CED    DVIPV
Sbjct: 428 VVHRNDNVLMIVPPPEPLTTGCQWAKCIFPASLEGIVLRCEDTSKIDVIPV 478


>Medtr4g007930.1 | ubiquitin-specific protease family C19 protein |
           HC | chr4:1318372-1323367 | 20130731
          Length = 436

 Score =  313 bits (803), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 139/227 (61%), Positives = 176/227 (77%)

Query: 29  VVVLMIWNCCWGRRGLLGFVKRYPDAELRGAIDGQYVKVTGVVTCGSIPLESSYQRVPRC 88
           V     WN  WGRR ++GF+  YPD+ELR A +GQ+VKV+GVVTCG++PLESS+Q+VPRC
Sbjct: 210 VAASFTWNTYWGRRAIMGFIANYPDSELRTAKNGQFVKVSGVVTCGNVPLESSFQKVPRC 269

Query: 89  VYVSTELFEYKGLGGTSANPKHRCLSWGSRYSEKYVADFYISDFQTGLRALVKAGYGAKV 148
           VY ST L+EY+G    +ANP HR LSWG R  E+ V DFYISDFQ+GLRALVK G+GA+V
Sbjct: 270 VYTSTSLYEYRGWDSKAANPTHRRLSWGLRLLERRVVDFYISDFQSGLRALVKTGHGARV 329

Query: 149 APFVNPTTVVDVTKGNRELSPNFVGWLADRKLSSDDRIMRLKEGYIKEGSTVSVMGVVRR 208
            P+V+ + +++V     ELSP F+ WL +R LSSDDRI RL+EGY+KEGSTVSVMGVV R
Sbjct: 330 TPYVDDSVLINVNPTKEELSPEFIRWLGERNLSSDDRITRLEEGYVKEGSTVSVMGVVHR 389

Query: 209 HDNVLMIVPSTEPVSTGCQWLRCLLPTYAEGLILTCEDNQNSDVIPV 255
           ++NVLMIVP  EP++TGC WL+C+ P   EG++L CED   +DVIPV
Sbjct: 390 NENVLMIVPPPEPITTGCHWLKCIFPASLEGIVLRCEDTSKNDVIPV 436


>Medtr4g007930.3 | ubiquitin-specific protease family C19 protein |
           HC | chr4:1319178-1323367 | 20130731
          Length = 487

 Score =  313 bits (803), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 139/227 (61%), Positives = 176/227 (77%)

Query: 29  VVVLMIWNCCWGRRGLLGFVKRYPDAELRGAIDGQYVKVTGVVTCGSIPLESSYQRVPRC 88
           V     WN  WGRR ++GF+  YPD+ELR A +GQ+VKV+GVVTCG++PLESS+Q+VPRC
Sbjct: 261 VAASFTWNTYWGRRAIMGFIANYPDSELRTAKNGQFVKVSGVVTCGNVPLESSFQKVPRC 320

Query: 89  VYVSTELFEYKGLGGTSANPKHRCLSWGSRYSEKYVADFYISDFQTGLRALVKAGYGAKV 148
           VY ST L+EY+G    +ANP HR LSWG R  E+ V DFYISDFQ+GLRALVK G+GA+V
Sbjct: 321 VYTSTSLYEYRGWDSKAANPTHRRLSWGLRLLERRVVDFYISDFQSGLRALVKTGHGARV 380

Query: 149 APFVNPTTVVDVTKGNRELSPNFVGWLADRKLSSDDRIMRLKEGYIKEGSTVSVMGVVRR 208
            P+V+ + +++V     ELSP F+ WL +R LSSDDRI RL+EGY+KEGSTVSVMGVV R
Sbjct: 381 TPYVDDSVLINVNPTKEELSPEFIRWLGERNLSSDDRITRLEEGYVKEGSTVSVMGVVHR 440

Query: 209 HDNVLMIVPSTEPVSTGCQWLRCLLPTYAEGLILTCEDNQNSDVIPV 255
           ++NVLMIVP  EP++TGC WL+C+ P   EG++L CED   +DVIPV
Sbjct: 441 NENVLMIVPPPEPITTGCHWLKCIFPASLEGIVLRCEDTSKNDVIPV 487


>Medtr4g007930.2 | ubiquitin-specific protease family C19 protein |
           HC | chr4:1318372-1323367 | 20130731
          Length = 487

 Score =  313 bits (803), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 139/227 (61%), Positives = 176/227 (77%)

Query: 29  VVVLMIWNCCWGRRGLLGFVKRYPDAELRGAIDGQYVKVTGVVTCGSIPLESSYQRVPRC 88
           V     WN  WGRR ++GF+  YPD+ELR A +GQ+VKV+GVVTCG++PLESS+Q+VPRC
Sbjct: 261 VAASFTWNTYWGRRAIMGFIANYPDSELRTAKNGQFVKVSGVVTCGNVPLESSFQKVPRC 320

Query: 89  VYVSTELFEYKGLGGTSANPKHRCLSWGSRYSEKYVADFYISDFQTGLRALVKAGYGAKV 148
           VY ST L+EY+G    +ANP HR LSWG R  E+ V DFYISDFQ+GLRALVK G+GA+V
Sbjct: 321 VYTSTSLYEYRGWDSKAANPTHRRLSWGLRLLERRVVDFYISDFQSGLRALVKTGHGARV 380

Query: 149 APFVNPTTVVDVTKGNRELSPNFVGWLADRKLSSDDRIMRLKEGYIKEGSTVSVMGVVRR 208
            P+V+ + +++V     ELSP F+ WL +R LSSDDRI RL+EGY+KEGSTVSVMGVV R
Sbjct: 381 TPYVDDSVLINVNPTKEELSPEFIRWLGERNLSSDDRITRLEEGYVKEGSTVSVMGVVHR 440

Query: 209 HDNVLMIVPSTEPVSTGCQWLRCLLPTYAEGLILTCEDNQNSDVIPV 255
           ++NVLMIVP  EP++TGC WL+C+ P   EG++L CED   +DVIPV
Sbjct: 441 NENVLMIVPPPEPITTGCHWLKCIFPASLEGIVLRCEDTSKNDVIPV 487


>Medtr4g007930.4 | ubiquitin-specific protease family C19 protein |
           HC | chr4:1319073-1323367 | 20130731
          Length = 487

 Score =  313 bits (803), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 139/227 (61%), Positives = 176/227 (77%)

Query: 29  VVVLMIWNCCWGRRGLLGFVKRYPDAELRGAIDGQYVKVTGVVTCGSIPLESSYQRVPRC 88
           V     WN  WGRR ++GF+  YPD+ELR A +GQ+VKV+GVVTCG++PLESS+Q+VPRC
Sbjct: 261 VAASFTWNTYWGRRAIMGFIANYPDSELRTAKNGQFVKVSGVVTCGNVPLESSFQKVPRC 320

Query: 89  VYVSTELFEYKGLGGTSANPKHRCLSWGSRYSEKYVADFYISDFQTGLRALVKAGYGAKV 148
           VY ST L+EY+G    +ANP HR LSWG R  E+ V DFYISDFQ+GLRALVK G+GA+V
Sbjct: 321 VYTSTSLYEYRGWDSKAANPTHRRLSWGLRLLERRVVDFYISDFQSGLRALVKTGHGARV 380

Query: 149 APFVNPTTVVDVTKGNRELSPNFVGWLADRKLSSDDRIMRLKEGYIKEGSTVSVMGVVRR 208
            P+V+ + +++V     ELSP F+ WL +R LSSDDRI RL+EGY+KEGSTVSVMGVV R
Sbjct: 381 TPYVDDSVLINVNPTKEELSPEFIRWLGERNLSSDDRITRLEEGYVKEGSTVSVMGVVHR 440

Query: 209 HDNVLMIVPSTEPVSTGCQWLRCLLPTYAEGLILTCEDNQNSDVIPV 255
           ++NVLMIVP  EP++TGC WL+C+ P   EG++L CED   +DVIPV
Sbjct: 441 NENVLMIVPPPEPITTGCHWLKCIFPASLEGIVLRCEDTSKNDVIPV 487


>Medtr4g094505.1 | ubiquitin-specific protease family C19 protein |
           HC | chr4:38101191-38102480 | 20130731
          Length = 143

 Score =  162 bits (411), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 75/116 (64%), Positives = 95/116 (81%)

Query: 112 CLSWGSRYSEKYVADFYISDFQTGLRALVKAGYGAKVAPFVNPTTVVDVTKGNRELSPNF 171
           C    +  ++++V DFYISDFQ+GLRALVK G+GA+V P+V+ + V+DV   N+E+SP+F
Sbjct: 28  CRGEENEMTDRHVVDFYISDFQSGLRALVKTGFGARVTPYVDDSVVIDVNPENKEMSPDF 87

Query: 172 VGWLADRKLSSDDRIMRLKEGYIKEGSTVSVMGVVRRHDNVLMIVPSTEPVSTGCQ 227
           + WL  R LSSDDRIM+LKEGYIKEGSTVSVMGVV R+DNVLMIVP  EP++TGCQ
Sbjct: 88  LRWLGKRNLSSDDRIMQLKEGYIKEGSTVSVMGVVHRNDNVLMIVPPPEPLTTGCQ 143


>Medtr8g106490.1 | ubiquitin-specific protease family C19 protein |
           HC | chr8:44932167-44932758 | 20130731
          Length = 117

 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 79/159 (49%), Gaps = 55/159 (34%)

Query: 95  LFEYKGLGGTSANPKHRCLSWGSRYSEKYVADFYISDFQTGLRALVKAGYGAKVAPF-VN 153
           L+EYK  G          + WGS Y+ +YVAD YI+DF++ LR LVK   GAKVAPF V 
Sbjct: 10  LYEYKEWGR---------IIWGSTYTREYVADLYITDFKSRLRELVKTRSGAKVAPFMVE 60

Query: 154 PTTVVDVTKGNRELSPNFVGWLADRKLSSDDRIMRLKEGYIKEGSTVSVMGVVRRHDNVL 213
           PTTVVD+ K                + S++DR M+L+E    E                 
Sbjct: 61  PTTVVDLEKC---------------EPSTNDRRMQLEEWGKSE----------------- 88

Query: 214 MIVPSTEPVSTGCQWLRCLLPTYAEGLILTCEDNQNSDV 252
                        +W+RCLLP   EGLI+TCE++QN+ V
Sbjct: 89  -------------KWMRCLLPNAVEGLIMTCEEDQNARV 114