Miyakogusa Predicted Gene

Lj6g3v1753390.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1753390.1 tr|C3RVN2|C3RVN2_9CYAN Hypo1 OS=Lyngbya wollei
PE=4 SV=1,33.68,8e-19,DUF2854,Protein of unknown function DUF2854;
seg,NULL,CUFF.59906.1
         (284 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g017260.1 | thylakoid membrane slr0575-like protein | HC |...   361   e-100

>Medtr6g017260.1 | thylakoid membrane slr0575-like protein | HC |
           chr6:6910549-6905838 | 20130731
          Length = 280

 Score =  361 bits (926), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/291 (67%), Positives = 215/291 (73%), Gaps = 19/291 (6%)

Query: 1   MPGGATVCS--GHRFLCLLLPDXXXXXXXXXXXXXXXXXXXXXXXXXXKLFLKPNNGFGS 58
           MPGGATV S  GHRF CL                              KLF K N     
Sbjct: 1   MPGGATVSSSSGHRFHCL-------PPLQLTKSPLVSVHPQSISCFHAKLFFKSN----- 48

Query: 59  KLSLTP-RAADSSTTQPLGAS----TNNTTLVPDDDFSISKVSFXXXXXXXXXXXXSYGF 113
           + S  P RAADSSTT    +S     ++ TLVPDD+ SI+K+SF            SYGF
Sbjct: 49  RFSFVPVRAADSSTTTASQSSSDVPIDSRTLVPDDEISITKISFGTIGLSLGVSLLSYGF 108

Query: 114 GAYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYSDAQRLQDKCATPILKQ 173
           GAYFNILPGSEWSA+MLTYGFPLAIIGMALKYAELKPVPCLTYSDA +LQ+KCATPILKQ
Sbjct: 109 GAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYSDAYKLQEKCATPILKQ 168

Query: 174 VKSDVTRYRYGDEQHLDEALKRIFQYGQGGGIPRRSAPVLQMIREEVTQDGKYVLVLVFE 233
           VKSDVTR+RYGDEQHL+EALKRIFQYG G GIPRRSAP+LQM+REEVTQDGKY LVLVFE
Sbjct: 169 VKSDVTRFRYGDEQHLEEALKRIFQYGLGNGIPRRSAPILQMVREEVTQDGKYSLVLVFE 228

Query: 234 AKALQLSDFEKRQAKFTSFFGPGVTAEVGKSEKDLYEVRLISNTDPSASPS 284
           AKAL+LSDFE+RQAKFTSFFGPG+TAEVG  E DLYEVRLISNTDP+A+ S
Sbjct: 229 AKALKLSDFEQRQAKFTSFFGPGITAEVGNGENDLYEVRLISNTDPNAASS 279