Miyakogusa Predicted Gene
- Lj6g3v1753260.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1753260.1 Non Characterized Hit- tr|G7IP83|G7IP83_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,88.39,0,seg,NULL; ARM repeat,Armadillo-type fold;
CALCIUM-BINDING PROTEIN 39-RELATED,Mo25-like;
coiled-coil,,CUFF.59948.1
(339 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g026050.1 | calcium-binding protein | HC | chr2:9393837-94... 609 e-174
Medtr4g133600.1 | calcium-binding protein | HC | chr4:55883735-5... 556 e-158
Medtr4g133600.2 | calcium-binding protein | HC | chr4:55884215-5... 526 e-150
Medtr2g021040.1 | structural constituent of ribosome protein, pu... 254 1e-67
Medtr2g021040.2 | structural constituent of ribosome protein, pu... 227 1e-59
Medtr2g021040.3 | structural constituent of ribosome protein, pu... 226 3e-59
Medtr0003s0650.1 | structural constituent of ribosome protein, p... 193 2e-49
Medtr4g028580.1 | calcium-binding protein | HC | chr4:9623673-96... 82 5e-16
Medtr4g028570.1 | calcium-binding protein | HC | chr4:9623036-96... 65 1e-10
>Medtr2g026050.1 | calcium-binding protein | HC |
chr2:9393837-9400795 | 20130731
Length = 337
Score = 609 bits (1570), Expect = e-174, Method: Compositional matrix adjust.
Identities = 294/336 (87%), Positives = 313/336 (93%)
Query: 1 MKGLFKPKPRTPVEIVRQTRDLLLFFDXXXXXXXXXXXXXQMSELCKNIRELKSILYGNS 60
MKGLFKPKPRTP +IVRQTRDLLLFFD QM+ELCKNIRELKSILYGNS
Sbjct: 1 MKGLFKPKPRTPTDIVRQTRDLLLFFDRNTESRDSKREEKQMTELCKNIRELKSILYGNS 60
Query: 61 ESEPVSEACAQLTQEFFQENVLPLLIKFLPKLNLEARKDATQVVANLQRQPVQSKLIASD 120
ESEPVSEACAQLTQEFF+EN L LLIK +PKLNLEARKDATQVVANLQRQPVQSKLIASD
Sbjct: 61 ESEPVSEACAQLTQEFFKENTLRLLIKCIPKLNLEARKDATQVVANLQRQPVQSKLIASD 120
Query: 121 FLEKNIDLLDILILGYENTDMALHYGAMLRECIRHQIVAQYVLNSPHMKKFFDYIQLPNF 180
+LE N+DL+DILI+GYENTDMALHYGAMLRECIRHQIVA+YVLNSPHMKKFFDYIQLPNF
Sbjct: 121 YLENNMDLMDILIVGYENTDMALHYGAMLRECIRHQIVAKYVLNSPHMKKFFDYIQLPNF 180
Query: 181 DIAADAAATFKELLTRHKSTVAAFLSTNYEWFFAEYNSKLLESTNYITRRQAVKLLGDML 240
DIAADAAATFKEL+TRHKSTVA FLS NYEWFFA+YNSKLLES+NYITRR AVKLLGDML
Sbjct: 181 DIAADAAATFKELMTRHKSTVAEFLSKNYEWFFADYNSKLLESSNYITRRLAVKLLGDML 240
Query: 241 LDRSNSAVMTRYVSSRDNMRILMNLLRESSKSIQLEAFHVFKLFAANQNKPADIVGILVA 300
LDRSNSAVMT+YVSSR+N+RILMNLLRESSKSIQ+EAFHVFKLFAANQNKPADIV I VA
Sbjct: 241 LDRSNSAVMTQYVSSRENLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPADIVSIFVA 300
Query: 301 NKSKILRLLDDFKIDKEDEQFEADKAQVMEEIAALE 336
NKSK+LRLLD+FKIDKEDEQFEADKAQVMEEIA+LE
Sbjct: 301 NKSKMLRLLDEFKIDKEDEQFEADKAQVMEEIASLE 336
>Medtr4g133600.1 | calcium-binding protein | HC |
chr4:55883735-55887888 | 20130731
Length = 383
Score = 556 bits (1432), Expect = e-158, Method: Compositional matrix adjust.
Identities = 272/338 (80%), Positives = 298/338 (88%), Gaps = 1/338 (0%)
Query: 2 KGLFKPKPRTPVEIVRQTRDLLLFFDXXXXXXXXXXXXXQMSELCKNIRELKSILYGNSE 61
K LFKPKPRTP +IVR TRDLL +M EL KN+RE+K+ILYGNSE
Sbjct: 47 KSLFKPKPRTPSDIVRNTRDLLRLLQNSNSSDNKRDNE-KMIELFKNLREMKTILYGNSE 105
Query: 62 SEPVSEACAQLTQEFFQENVLPLLIKFLPKLNLEARKDATQVVANLQRQPVQSKLIASDF 121
+EPV EAC+QLTQEFF EN L LL+ LPKLNLEARKDATQVVANLQRQ VQSKLIASD+
Sbjct: 106 AEPVPEACSQLTQEFFNENTLRLLVHCLPKLNLEARKDATQVVANLQRQQVQSKLIASDY 165
Query: 122 LEKNIDLLDILILGYENTDMALHYGAMLRECIRHQIVAQYVLNSPHMKKFFDYIQLPNFD 181
LEKN+DL+DIL+ YEN +MALHYGAMLRECIRHQIVA+YVL SPHMKKFFDYIQLPNFD
Sbjct: 166 LEKNLDLMDILVSSYENPEMALHYGAMLRECIRHQIVAKYVLESPHMKKFFDYIQLPNFD 225
Query: 182 IAADAAATFKELLTRHKSTVAAFLSTNYEWFFAEYNSKLLESTNYITRRQAVKLLGDMLL 241
IAADAAATFKEL+TRHKSTVA FLS NYEWFF EYNSKLLES+NYITRRQAVKLLGDMLL
Sbjct: 226 IAADAAATFKELMTRHKSTVAEFLSNNYEWFFDEYNSKLLESSNYITRRQAVKLLGDMLL 285
Query: 242 DRSNSAVMTRYVSSRDNMRILMNLLRESSKSIQLEAFHVFKLFAANQNKPADIVGILVAN 301
DRSN+AVMTRYVSSRDN+RILMNL+RESSKSIQ+EAFHVFKLFAANQ KPA+I+GILVAN
Sbjct: 286 DRSNAAVMTRYVSSRDNLRILMNLMRESSKSIQIEAFHVFKLFAANQKKPAEIIGILVAN 345
Query: 302 KSKILRLLDDFKIDKEDEQFEADKAQVMEEIAALELRE 339
+SK+LRLL D KIDKEDEQFEADKAQVM+EIAALE +E
Sbjct: 346 RSKLLRLLGDLKIDKEDEQFEADKAQVMKEIAALEPKE 383
>Medtr4g133600.2 | calcium-binding protein | HC |
chr4:55884215-55888218 | 20130731
Length = 298
Score = 526 bits (1356), Expect = e-150, Method: Compositional matrix adjust.
Identities = 254/298 (85%), Positives = 278/298 (93%)
Query: 42 MSELCKNIRELKSILYGNSESEPVSEACAQLTQEFFQENVLPLLIKFLPKLNLEARKDAT 101
M EL KN+RE+K+ILYGNSE+EPV EAC+QLTQEFF EN L LL+ LPKLNLEARKDAT
Sbjct: 1 MIELFKNLREMKTILYGNSEAEPVPEACSQLTQEFFNENTLRLLVHCLPKLNLEARKDAT 60
Query: 102 QVVANLQRQPVQSKLIASDFLEKNIDLLDILILGYENTDMALHYGAMLRECIRHQIVAQY 161
QVVANLQRQ VQSKLIASD+LEKN+DL+DIL+ YEN +MALHYGAMLRECIRHQIVA+Y
Sbjct: 61 QVVANLQRQQVQSKLIASDYLEKNLDLMDILVSSYENPEMALHYGAMLRECIRHQIVAKY 120
Query: 162 VLNSPHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAAFLSTNYEWFFAEYNSKLL 221
VL SPHMKKFFDYIQLPNFDIAADAAATFKEL+TRHKSTVA FLS NYEWFF EYNSKLL
Sbjct: 121 VLESPHMKKFFDYIQLPNFDIAADAAATFKELMTRHKSTVAEFLSNNYEWFFDEYNSKLL 180
Query: 222 ESTNYITRRQAVKLLGDMLLDRSNSAVMTRYVSSRDNMRILMNLLRESSKSIQLEAFHVF 281
ES+NYITRRQAVKLLGDMLLDRSN+AVMTRYVSSRDN+RILMNL+RESSKSIQ+EAFHVF
Sbjct: 181 ESSNYITRRQAVKLLGDMLLDRSNAAVMTRYVSSRDNLRILMNLMRESSKSIQIEAFHVF 240
Query: 282 KLFAANQNKPADIVGILVANKSKILRLLDDFKIDKEDEQFEADKAQVMEEIAALELRE 339
KLFAANQ KPA+I+GILVAN+SK+LRLL D KIDKEDEQFEADKAQVM+EIAALE +E
Sbjct: 241 KLFAANQKKPAEIIGILVANRSKLLRLLGDLKIDKEDEQFEADKAQVMKEIAALEPKE 298
>Medtr2g021040.1 | structural constituent of ribosome protein,
putative | HC | chr2:7107798-7113369 | 20130731
Length = 339
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/309 (42%), Positives = 197/309 (63%), Gaps = 2/309 (0%)
Query: 8 KPRTPVEIVRQTRDLLLFFDXXXXXXXXXXXXXQMSELCKNIRELKSILYGNSESEPVSE 67
+P+TP E+V+ ++ L+ D + E+ KN +++++ G+ ESEP +
Sbjct: 10 RPKTPQEVVKSIKESLMALDTKTVVEVKALEKA-LEEVEKNFVTMRTMISGDGESEPNLD 68
Query: 68 ACAQLTQEFFQENVLPLLIKFLPKLNLEARKDATQVVANLQRQPVQSKLIASDFLEKNID 127
+QL +E +E+VL LLI LP L EARKD L +Q V S +++ ++I+
Sbjct: 69 QVSQLVEEICKEDVLTLLIHKLPILGWEARKDLVHCWTILLKQKVDSNDCCVEYIHQHIE 128
Query: 128 LLDILILGYENTDMALHYGAMLRECIRHQIVAQYVLNSPHMKKFFDYIQLPNFDIAADAA 187
LLD L+ Y+N ++AL G MLRECI+ +A+Y+L S FF Y++LPNFD+A+DA
Sbjct: 129 LLDFLVACYDNKEIALSSGIMLRECIKFPNLAKYILESASFVLFFKYVELPNFDVASDAF 188
Query: 188 ATFKELLTRHKSTVAAFLSTNYEWFFAEYNSKLLESTNYITRRQAVKLLGDMLLDRSNSA 247
+TFK+LL++H + VA FL+ +Y+ FF +Y KLL S NY+TRRQ++KLL D LL+ N+
Sbjct: 189 STFKDLLSKHATVVAEFLTAHYDEFFDQYE-KLLTSPNYVTRRQSIKLLSDFLLESPNAQ 247
Query: 248 VMTRYVSSRDNMRILMNLLRESSKSIQLEAFHVFKLFAANQNKPADIVGILVANKSKILR 307
+M RY+ ++++M LL +SSK+IQL AFH+FK+F AN NKP D+ IL NK K+L
Sbjct: 248 IMKRYILEVRFLKVMMTLLTDSSKNIQLSAFHIFKIFVANPNKPRDVKIILGKNKGKLLE 307
Query: 308 LLDDFKIDK 316
LL + K
Sbjct: 308 LLHNLSPGK 316
>Medtr2g021040.2 | structural constituent of ribosome protein,
putative | HC | chr2:7107810-7113276 | 20130731
Length = 285
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/276 (41%), Positives = 178/276 (64%), Gaps = 2/276 (0%)
Query: 8 KPRTPVEIVRQTRDLLLFFDXXXXXXXXXXXXXQMSELCKNIRELKSILYGNSESEPVSE 67
+P+TP E+V+ ++ L+ D + E+ KN +++++ G+ ESEP +
Sbjct: 10 RPKTPQEVVKSIKESLMALDTKTVVEVKALEKA-LEEVEKNFVTMRTMISGDGESEPNLD 68
Query: 68 ACAQLTQEFFQENVLPLLIKFLPKLNLEARKDATQVVANLQRQPVQSKLIASDFLEKNID 127
+QL +E +E+VL LLI LP L EARKD L +Q V S +++ ++I+
Sbjct: 69 QVSQLVEEICKEDVLTLLIHKLPILGWEARKDLVHCWTILLKQKVDSNDCCVEYIHQHIE 128
Query: 128 LLDILILGYENTDMALHYGAMLRECIRHQIVAQYVLNSPHMKKFFDYIQLPNFDIAADAA 187
LLD L+ Y+N ++AL G MLRECI+ +A+Y+L S FF Y++LPNFD+A+DA
Sbjct: 129 LLDFLVACYDNKEIALSSGIMLRECIKFPNLAKYILESASFVLFFKYVELPNFDVASDAF 188
Query: 188 ATFKELLTRHKSTVAAFLSTNYEWFFAEYNSKLLESTNYITRRQAVKLLGDMLLDRSNSA 247
+TFK+LL++H + VA FL+ +Y+ FF +Y KLL S NY+TRRQ++KLL D LL+ N+
Sbjct: 189 STFKDLLSKHATVVAEFLTAHYDEFFDQYE-KLLTSPNYVTRRQSIKLLSDFLLESPNAQ 247
Query: 248 VMTRYVSSRDNMRILMNLLRESSKSIQLEAFHVFKL 283
+M RY+ ++++M LL +SSK+IQL AFH+FK+
Sbjct: 248 IMKRYILEVRFLKVMMTLLTDSSKNIQLSAFHIFKV 283
>Medtr2g021040.3 | structural constituent of ribosome protein,
putative | HC | chr2:7107810-7113276 | 20130731
Length = 316
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/276 (41%), Positives = 178/276 (64%), Gaps = 2/276 (0%)
Query: 8 KPRTPVEIVRQTRDLLLFFDXXXXXXXXXXXXXQMSELCKNIRELKSILYGNSESEPVSE 67
+P+TP E+V+ ++ L+ D + E+ KN +++++ G+ ESEP +
Sbjct: 10 RPKTPQEVVKSIKESLMALDTKTVVEVKALEKA-LEEVEKNFVTMRTMISGDGESEPNLD 68
Query: 68 ACAQLTQEFFQENVLPLLIKFLPKLNLEARKDATQVVANLQRQPVQSKLIASDFLEKNID 127
+QL +E +E+VL LLI LP L EARKD L +Q V S +++ ++I+
Sbjct: 69 QVSQLVEEICKEDVLTLLIHKLPILGWEARKDLVHCWTILLKQKVDSNDCCVEYIHQHIE 128
Query: 128 LLDILILGYENTDMALHYGAMLRECIRHQIVAQYVLNSPHMKKFFDYIQLPNFDIAADAA 187
LLD L+ Y+N ++AL G MLRECI+ +A+Y+L S FF Y++LPNFD+A+DA
Sbjct: 129 LLDFLVACYDNKEIALSSGIMLRECIKFPNLAKYILESASFVLFFKYVELPNFDVASDAF 188
Query: 188 ATFKELLTRHKSTVAAFLSTNYEWFFAEYNSKLLESTNYITRRQAVKLLGDMLLDRSNSA 247
+TFK+LL++H + VA FL+ +Y+ FF +Y KLL S NY+TRRQ++KLL D LL+ N+
Sbjct: 189 STFKDLLSKHATVVAEFLTAHYDEFFDQYE-KLLTSPNYVTRRQSIKLLSDFLLESPNAQ 247
Query: 248 VMTRYVSSRDNMRILMNLLRESSKSIQLEAFHVFKL 283
+M RY+ ++++M LL +SSK+IQL AFH+FK+
Sbjct: 248 IMKRYILEVRFLKVMMTLLTDSSKNIQLSAFHIFKV 283
>Medtr0003s0650.1 | structural constituent of ribosome protein,
putative | HC | scaffold0003:360290-359256 | 20130731
Length = 344
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/302 (38%), Positives = 182/302 (60%), Gaps = 11/302 (3%)
Query: 47 KNIRELKSILYGNS-ESEPVS-EACAQLTQEFFQENVLPLLIKFLPKLNLEARKDATQVV 104
KN ++++L N SE ++ + +Q +E + +VL L+I+ LP L +ARKD
Sbjct: 43 KNFGTMRTMLSENGIYSESLNLDRVSQFVEEICKADVLTLVIQKLPILGWQARKDLVHCW 102
Query: 105 ANLQRQPV--QSKLIASDFLEKNIDLLDILILGYENTDMALHYGAMLRECIRHQIVAQYV 162
+ +Q V + +++E++I+LLD L++ Y+ A G MLRECI+ +A+ +
Sbjct: 103 SIFFKQKVVDTNDYSCVEYIEQHIELLDFLLVCYDKNGTAPSSGIMLRECIKFPNLAKGL 162
Query: 163 LNSPHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAAFLSTNYEWFFAEYNSKLLE 222
L SP FF Y+ LPNFD+A DA +T KELLT+H + V+ +L T+ + FF YN LL+
Sbjct: 163 LESPRFGLFFKYVDLPNFDVAYDAFSTLKELLTKHVNVVSEYLKTHCDVFFDLYNENLLK 222
Query: 223 STNYITRRQAVKLLGDMLL----DRSNSAVMTRYVSSRDNMRILMNLLRESSKSIQLEAF 278
S NY TRR ++ LL D+LL + S++ +M RY+S ++++M LL +SSK IQL AF
Sbjct: 223 SPNYATRRGSINLLLDILLETSKETSDARIMKRYISQVRYLKVVMTLLTDSSKKIQLSAF 282
Query: 279 HVFKLFAANQNKPADIVGILVAN---KSKILRLLDDFKIDKEDEQFEADKAQVMEEIAAL 335
+FK F AN NKP ++ IL N ++L L K KEDEQF+ +K +++EI +
Sbjct: 283 DIFKFFVANPNKPREVKIILCKNKEKLLELLHKLSLVKDSKEDEQFKEEKEYIIKEIERI 342
Query: 336 EL 337
+
Sbjct: 343 SI 344
>Medtr4g028580.1 | calcium-binding protein | HC |
chr4:9623673-9623945 | 20130731
Length = 66
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 55/91 (60%), Gaps = 25/91 (27%)
Query: 249 MTRYVSSRDNMRILMNLLRESSKSIQLEAFHVFKLFAANQNKPADIVGILVANKSKILRL 308
MTRYV SRDN+RILMNL+R ILVANKSK LRL
Sbjct: 1 MTRYVLSRDNLRILMNLMRVKQ-------------------------DILVANKSKFLRL 35
Query: 309 LDDFKIDKEDEQFEADKAQVMEEIAALELRE 339
L D KID ED+QFE DKAQVM+EI+ALE +E
Sbjct: 36 LGDLKIDNEDDQFEPDKAQVMKEISALEPKE 66
>Medtr4g028570.1 | calcium-binding protein | HC |
chr4:9623036-9623560 | 20130731
Length = 66
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 37/65 (56%), Gaps = 18/65 (27%)
Query: 146 GAMLRECIRHQIVAQYVLNSPHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAAFL 205
G LRE IRH IV LPNFDIAADAA+ FKE +TRHKSTV L
Sbjct: 20 GVTLRESIRHHIV------------------LPNFDIAADAASNFKERMTRHKSTVDELL 61
Query: 206 STNYE 210
S NYE
Sbjct: 62 SNNYE 66