Miyakogusa Predicted Gene

Lj6g3v1721640.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1721640.3 tr|B9NCM8|B9NCM8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_590992 PE=4
SV=1,63.64,7e-19,seg,NULL; HEAVY-METAL-ASSOCIATED DOMAIN-CONTAINING
PROTEIN,NULL; COPPER TRANSPORT PROTEIN ATOX1-RELA,CUFF.59847.3
         (235 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g133900.1 | heavy-metal-associated domain protein | HC | c...    89   3e-18
Medtr4g133900.2 | heavy-metal-associated domain protein | HC | c...    89   3e-18
Medtr2g026670.1 | heavy-metal-associated domain protein | HC | c...    88   8e-18
Medtr7g056413.1 | hypothetical protein | HC | chr7:19922978-1992...    86   3e-17

>Medtr4g133900.1 | heavy-metal-associated domain protein | HC |
          chr4:56013698-56011809 | 20130731
          Length = 261

 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/68 (69%), Positives = 50/68 (73%)

Query: 1  MKLKVDLEXXXXXXXXXXXXXXFPQIRDQKYDEKDNIVFITVVCCSPEKIRDKLCCKGGG 60
          MKLKVDL+              FPQIRDQ YDEK+NIV ITVVCCSPEKIRDK+CCKG G
Sbjct: 12 MKLKVDLQCAKCYKKVKKVLCKFPQIRDQVYDEKNNIVTITVVCCSPEKIRDKICCKGCG 71

Query: 61 TIKSIEIV 68
           IKSIEIV
Sbjct: 72 AIKSIEIV 79



 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 44/66 (66%), Positives = 48/66 (72%), Gaps = 5/66 (7%)

Query: 174 TPCYEGRPAGPGFYEYGGPMP----CYDGYYARPVYDSYGGSRPYYVNNRCDQYFSEENP 229
           TPCYEGR  GP F  YGGP P    CYDGYY RPVYDSYGG RP YV +RCD+Y  E+N 
Sbjct: 197 TPCYEGRGGGPCFEGYGGPPPAPISCYDGYYGRPVYDSYGGGRPCYV-SRCDEYLCEDNA 255

Query: 230 TGCSIM 235
           T C+IM
Sbjct: 256 TACTIM 261


>Medtr4g133900.2 | heavy-metal-associated domain protein | HC |
          chr4:56013698-56011809 | 20130731
          Length = 261

 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/68 (69%), Positives = 50/68 (73%)

Query: 1  MKLKVDLEXXXXXXXXXXXXXXFPQIRDQKYDEKDNIVFITVVCCSPEKIRDKLCCKGGG 60
          MKLKVDL+              FPQIRDQ YDEK+NIV ITVVCCSPEKIRDK+CCKG G
Sbjct: 12 MKLKVDLQCAKCYKKVKKVLCKFPQIRDQVYDEKNNIVTITVVCCSPEKIRDKICCKGCG 71

Query: 61 TIKSIEIV 68
           IKSIEIV
Sbjct: 72 AIKSIEIV 79



 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 44/66 (66%), Positives = 48/66 (72%), Gaps = 5/66 (7%)

Query: 174 TPCYEGRPAGPGFYEYGGPMP----CYDGYYARPVYDSYGGSRPYYVNNRCDQYFSEENP 229
           TPCYEGR  GP F  YGGP P    CYDGYY RPVYDSYGG RP YV +RCD+Y  E+N 
Sbjct: 197 TPCYEGRGGGPCFEGYGGPPPAPISCYDGYYGRPVYDSYGGGRPCYV-SRCDEYLCEDNA 255

Query: 230 TGCSIM 235
           T C+IM
Sbjct: 256 TACTIM 261


>Medtr2g026670.1 | heavy-metal-associated domain protein | HC |
          chr2:9688485-9686762 | 20130731
          Length = 251

 Score = 87.8 bits (216), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 46/68 (67%), Positives = 50/68 (73%)

Query: 1  MKLKVDLEXXXXXXXXXXXXXXFPQIRDQKYDEKDNIVFITVVCCSPEKIRDKLCCKGGG 60
          M+LKVDLE              +PQIRDQ YD+K NIV ITVVCCSPEKIRDKLC KGGG
Sbjct: 8  MRLKVDLECEKCYKKVRKLLNKYPQIRDQNYDDKANIVTITVVCCSPEKIRDKLCYKGGG 67

Query: 61 TIKSIEIV 68
          +IKSIEIV
Sbjct: 68 SIKSIEIV 75



 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/64 (75%), Positives = 50/64 (78%), Gaps = 5/64 (7%)

Query: 175 PCYEGRPAGP-GFY--EYGGPMPCYDGYYARPVYDSYGGSRPYYVNNRCDQYFSEENPTG 231
           PCYEGRP GP G Y  +YGGP  CYDGYYARPVYDSYGG  P YV  RCDQY SEEN TG
Sbjct: 190 PCYEGRPVGPYGPYPNQYGGPQ-CYDGYYARPVYDSYGGGGPCYV-GRCDQYLSEENATG 247

Query: 232 CSIM 235
           C+IM
Sbjct: 248 CTIM 251


>Medtr7g056413.1 | hypothetical protein | HC |
          chr7:19922978-19924532 | 20130731
          Length = 205

 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 49/68 (72%)

Query: 1  MKLKVDLEXXXXXXXXXXXXXXFPQIRDQKYDEKDNIVFITVVCCSPEKIRDKLCCKGGG 60
          M+LKVDL+              +PQIRDQ YDEK+ IV I VVCCSPEK+RD +CC+GGG
Sbjct: 8  MRLKVDLQCRKCCKKVKKILCKYPQIRDQIYDEKNGIVTIRVVCCSPEKVRDNICCQGGG 67

Query: 61 TIKSIEIV 68
          TIKSIEIV
Sbjct: 68 TIKSIEIV 75