Miyakogusa Predicted Gene

Lj6g3v1721600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1721600.1 tr|G7JMX4|G7JMX4_MEDTR Acyl carrier protein
(Fragment) OS=Medicago truncatula GN=MTR_4g133940 PE=3
S,64.79,1e-18,no description,Acyl carrier protein-like; acyl_carrier:
acyl carrier protein,Acyl carrier protein (A,CUFF.59840.1
         (98 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g133928.2 | acyl carrier protein | HC | chr4:56055185-5605...   134   1e-32
Medtr4g133928.1 | acyl carrier protein | HC | chr4:56055350-5605...   134   1e-32
Medtr0446s0010.1 | acyl carrier protein | HC | scaffold0446:4489...    97   3e-21
Medtr7g080760.1 | acyl carrier protein | HC | chr7:30748166-3075...    81   2e-16
Medtr7g080390.1 | acyl carrier protein | HC | chr7:30571757-3056...    81   2e-16

>Medtr4g133928.2 | acyl carrier protein | HC |
           chr4:56055185-56057567 | 20130731
          Length = 124

 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/93 (69%), Positives = 75/93 (80%)

Query: 1   MQLRCWSTYTTANYDQILDRVIALAKKYDKIDASKVTEAADFQKDLNMDNLDRVELIMVI 60
           M  RC  +   A+ D ILDRVI   KKYDKI+A+KVTE ADFQKDLN+D+LDRVEL+M +
Sbjct: 31  MHFRCRCSSAGASSDPILDRVIRRVKKYDKINAAKVTETADFQKDLNLDSLDRVELVMAL 90

Query: 61  EEEFYVEIPDENADKLNCCADVAKYIASEADKK 93
           EEEF +EIPDE ADKL CC DVAKYIASEAD+K
Sbjct: 91  EEEFSIEIPDEKADKLTCCTDVAKYIASEADQK 123


>Medtr4g133928.1 | acyl carrier protein | HC |
           chr4:56055350-56057566 | 20130731
          Length = 124

 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/93 (69%), Positives = 75/93 (80%)

Query: 1   MQLRCWSTYTTANYDQILDRVIALAKKYDKIDASKVTEAADFQKDLNMDNLDRVELIMVI 60
           M  RC  +   A+ D ILDRVI   KKYDKI+A+KVTE ADFQKDLN+D+LDRVEL+M +
Sbjct: 31  MHFRCRCSSAGASSDPILDRVIRRVKKYDKINAAKVTETADFQKDLNLDSLDRVELVMAL 90

Query: 61  EEEFYVEIPDENADKLNCCADVAKYIASEADKK 93
           EEEF +EIPDE ADKL CC DVAKYIASEAD+K
Sbjct: 91  EEEFSIEIPDEKADKLTCCTDVAKYIASEADQK 123


>Medtr0446s0010.1 | acyl carrier protein | HC |
           scaffold0446:4489-4043 | 20130731
          Length = 109

 Score = 97.1 bits (240), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 46/71 (64%), Positives = 55/71 (77%)

Query: 1   MQLRCWSTYTTANYDQILDRVIALAKKYDKIDASKVTEAADFQKDLNMDNLDRVELIMVI 60
           M  RC  +   A+ D ILDRVI   KKYDKI+A+KVTE ADFQKDLN+D+LDRVE +M +
Sbjct: 31  MHFRCRCSSAGASSDPILDRVIRRVKKYDKINAAKVTETADFQKDLNLDSLDRVEHVMAL 90

Query: 61  EEEFYVEIPDE 71
           EEEF +EIPDE
Sbjct: 91  EEEFSIEIPDE 101


>Medtr7g080760.1 | acyl carrier protein | HC |
           chr7:30748166-30752690 | 20130731
          Length = 119

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 65/97 (67%), Gaps = 8/97 (8%)

Query: 2   QLRCW--STYTTANYD------QILDRVIALAKKYDKIDASKVTEAADFQKDLNMDNLDR 53
           +L+ W  S  + +++D      ++++RV+++ K + K+D SKVT    FQKDL +D+LD 
Sbjct: 20  KLQPWNGSIRSMSSHDDHITKEEVVERVLSVIKDFPKVDPSKVTPEVHFQKDLGLDSLDN 79

Query: 54  VELIMVIEEEFYVEIPDENADKLNCCADVAKYIASEA 90
           VE++M +EEEF +EIPD+ ADK++ C    +YI++  
Sbjct: 80  VEIVMALEEEFKLEIPDKEADKIDSCHLAIEYISNHP 116


>Medtr7g080390.1 | acyl carrier protein | HC |
           chr7:30571757-30569287 | 20130731
          Length = 130

 Score = 80.9 bits (198), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 3/94 (3%)

Query: 3   LRCWSTYTTANY---DQILDRVIALAKKYDKIDASKVTEAADFQKDLNMDNLDRVELIMV 59
           LR +S      +    ++ DRV++  K + K+D SKVT +A FQ DL +D+LD VE++M 
Sbjct: 37  LRRFSEEVRGTFLDKSEVTDRVVSCVKNFQKVDPSKVTPSAHFQNDLGLDSLDAVEIVMA 96

Query: 60  IEEEFYVEIPDENADKLNCCADVAKYIASEADKK 93
           +EEEF  EIPD  ADK+N       +IAS    K
Sbjct: 97  LEEEFGFEIPDNEADKINSVNLAIDFIASHPQAK 130