Miyakogusa Predicted Gene

Lj6g3v1709530.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1709530.2 Non Characterized Hit- tr|I1GZ02|I1GZ02_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,51.11,2e-18,Tudor/PWWP/MBT,NULL; seg,NULL,CUFF.59833.2
         (451 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g027090.1 | sister chromatid cohesion PDS5-like protein | ...   380   e-105
Medtr4g134080.1 | sister chromatid cohesion PDS5-like protein | ...   238   6e-63
Medtr4g134080.3 | sister chromatid cohesion PDS5-like protein | ...   236   3e-62
Medtr4g134080.2 | sister chromatid cohesion PDS5-like protein | ...   233   3e-61
Medtr3g106100.1 | nucleic acid-binding protein, putative | HC | ...    86   5e-17
Medtr4g006875.2 | sister chromatid cohesion PDS5-like protein | ...    80   4e-15
Medtr4g006875.1 | sister chromatid cohesion PDS5-like protein | ...    80   4e-15
Medtr1g014270.1 | lamin-B receptor of tudor domain protein | HC ...    77   3e-14
Medtr7g109470.1 | DNA mismatch repair MSH3-like protein | HC | c...    65   1e-10
Medtr1g010290.1 | enhancer of polycomb-like transcription factor...    60   6e-09
Medtr7g021365.1 | histone-lysine N-methyltransferase ATX2-like p...    57   3e-08
Medtr7g021365.2 | histone-lysine N-methyltransferase ATX2-like p...    57   3e-08
Medtr7g021365.3 | histone-lysine N-methyltransferase ATX2-like p...    57   3e-08

>Medtr2g027090.1 | sister chromatid cohesion PDS5-like protein | HC |
            chr2:9853017-9871224 | 20130731
          Length = 1683

 Score =  380 bits (977), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 248/453 (54%), Positives = 299/453 (66%), Gaps = 20/453 (4%)

Query: 3    PEFETIKKRKVGEGIXXXXXXXXXXXFTPGKFQSRSTSKA-HGITREDASRGKSLLDVEI 61
            PEF TIKKRKVGE              T GK +  S+SKA   I+ E  S GK LL+  +
Sbjct: 1214 PEFGTIKKRKVGEETLAPVPKRKRSAVTHGKSRPSSSSKASQRISEEVPSGGKLLLNAGV 1273

Query: 62   KPDKGSKTRQRKIVKGKKSSLEPKAKASDSYHIEESDKSEEHDIKSPEYLEPTDKTESSN 121
             PD GSK  QRK+VKGK+ S E K KAS+++ I+ESDKSE+HDIKS   L+  +KT++ N
Sbjct: 1274 SPDTGSKNMQRKLVKGKEPSSEQKIKASENHRIDESDKSEDHDIKSSGKLKTPNKTKNEN 1333

Query: 122  FKSSIGSTKELKRKSIGGISKCTTMKGDSDAEDLIGCRIKVWWPLDKQFYEGTVKSYDPS 181
            FK+S GSTK  KRKSIGG++KCTT +G+SDAEDLIGCR+KVWWPLDK+FY+GTV+SYD S
Sbjct: 1334 FKTSAGSTKRQKRKSIGGLAKCTTKEGESDAEDLIGCRVKVWWPLDKKFYKGTVQSYDSS 1393

Query: 182  KRKHKISYDDGEVEELRLEKEHWELINKDPKPSKKLKPAKNPPFHEVYTRKKQRSPRGSA 241
            KRKH I YDDGEVE+L LEKE WELI+   K +KKLK +K+P  HEV T KKQRS  GS 
Sbjct: 1394 KRKHAILYDDGEVEKLCLEKERWELIDGGNKSNKKLKSSKSPSLHEVSTGKKQRSSGGST 1453

Query: 242  SKKTTKIANGKKSPSKHVKHGQKGASESNFDQDAKES--SEQSNPEEKMISKAEIESGGS 299
            SKKTTKI NGK SPSKH K GQ+ AS++NF +   ES  SE  NPEE  I++AEI S GS
Sbjct: 1454 SKKTTKIVNGKPSPSKHAKRGQRKASKTNFHEGVNESSDSELPNPEETTIAEAEINSDGS 1513

Query: 300  EREQAEGSDV--TKEXXXXXXXXXXXHGXXXXXXXXXXXXXXPDE--------------E 343
            + EQ EGSDV  TK+            G              PDE              E
Sbjct: 1514 KGEQDEGSDVNITKKKKPNRKRKSVSWGKRSKKKKSVSNKKEPDEEKHEPNEEKQEPDAE 1573

Query: 344  KQENGKRLSEDRESVPQEVQNDDEESTSEGRDVDESRGTLREHVNGEDEPGSEGNEIDPD 403
            KQ+  + LSEDRE  PQ  QND+EE++S+ RD DESR   RE+VN E+E G EGN+ + D
Sbjct: 1574 KQDYPETLSEDREGYPQGAQNDEEENSSKERDADESREASRENVNEEEESGPEGNQHESD 1633

Query: 404  VESSPQK-VKKPLTELASPHDKRVPEVSDDEPL 435
            VESSP + VKK L +L SP D    E+ DDEPL
Sbjct: 1634 VESSPSREVKKSLDDLTSPEDATFAELPDDEPL 1666


>Medtr4g134080.1 | sister chromatid cohesion PDS5-like protein | HC |
            chr4:56119240-56132121 | 20130731
          Length = 1660

 Score =  238 bits (608), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 176/384 (45%), Positives = 242/384 (63%), Gaps = 20/384 (5%)

Query: 57   LDVEIKPDKGSKTRQRKIVKGKK-SSLEPKAKASDSYHIEESDKSEEHDIKSPEYLEPTD 115
            LD EI PD  S+T +R +VK    SSL+ K K S+S+H +ES+K +++D+KSP+ LE  +
Sbjct: 1276 LDAEINPDTDSETMERIMVKDLLVSSLKQKFKGSESHHNDESNKHDDYDMKSPDDLEQNE 1335

Query: 116  KTESSNFKSSIGSTKELKRKSIGGISKCTTMKGDSDAEDLIGCRIKVWWPLDKQFYEGTV 175
            KT S+N KS    +K+ KRK + G++KC   +G+ D+EDLIGCRIK+WWP DK++Y GT+
Sbjct: 1336 KTLSNNSKSPTCFSKKTKRKRVAGLTKCAMKRGEIDSEDLIGCRIKIWWPTDKKYYGGTI 1395

Query: 176  KSYDPSKRKHKISYDDGEVEELRLEKEHWELINKDPKPSKKLKPAKNPPFHEVYTRKKQR 235
            KSYD  KRKH I Y+DG+VE LRLEKE WEL++K  K +KK+K +         +  K +
Sbjct: 1396 KSYDSLKRKHVILYEDGDVEILRLEKERWELLDKGRKSTKKIKRSSLET-----SGHKLK 1450

Query: 236  SPRGSASKKTTKIANGKKSPSKHVKHGQKGASESNFDQD-AKESSEQSNPEEKMISKA-E 293
               GS SKK  KI NGK+SPSK  K  +K AS+S+F Q+ AKE+SE SNPEE MISKA E
Sbjct: 1451 GSSGSPSKKKKKIVNGKQSPSKPAKPRKKYASKSDFYQEQAKETSEISNPEETMISKADE 1510

Query: 294  IESGGSERE-QAEGSDVTKEXXXXXXXXXXX-HGXXXXXXXXXXXXXXPDEEKQENGKRL 351
             +SGGSE E  A  +++TK+             G               D++K++  +R+
Sbjct: 1511 TDSGGSEEELTAVHNEITKKGKKSNKKVRSVPRGKRLKKTKNFHHIEESDDDKRDYNERI 1570

Query: 352  SEDRESVPQEVQNDDEESTSEGRDVDESRGTLREHVNGEDEPGSEGNEIDPDVESSPQKV 411
            SEDRESVPQ         +SE + VDES    RE V+GE+E  SEG + + DV  SP + 
Sbjct: 1571 SEDRESVPQ--------YSSEEKKVDESSE--RESVHGEEESESEGEQDNSDVGDSPGET 1620

Query: 412  KKPLTELASPHDKRVPEVSDDEPL 435
            ++   E +SP D  + E+SD+ PL
Sbjct: 1621 ERSHIEPSSPDDVSIAEISDNIPL 1644


>Medtr4g134080.3 | sister chromatid cohesion PDS5-like protein | HC |
            chr4:56119254-56132113 | 20130731
          Length = 1667

 Score =  236 bits (602), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 175/384 (45%), Positives = 240/384 (62%), Gaps = 21/384 (5%)

Query: 57   LDVEIKPDKGSKTRQRKIVKGKK-SSLEPKAKASDSYHIEESDKSEEHDIKSPEYLEPTD 115
            LD EI PD  S+T +R +VK    SSL+ K K S+S+H +ES+K +++D+KSP+ LE  +
Sbjct: 1284 LDAEINPDTDSETMERIMVKDLLVSSLKQKFKGSESHHNDESNKHDDYDMKSPDDLEQNE 1343

Query: 116  KTESSNFKSSIGSTKELKRKSIGGISKCTTMKGDSDAEDLIGCRIKVWWPLDKQFYEGTV 175
            KT S+N KS    +K+ KRK + G++KC   +G+ D+EDLIGCRIK+WWP DK++Y GT+
Sbjct: 1344 KTLSNNSKSPTCFSKKTKRKRVAGLTKCAMKRGEIDSEDLIGCRIKIWWPTDKKYYGGTI 1403

Query: 176  KSYDPSKRKHKISYDDGEVEELRLEKEHWELINKDPKPSKKLKPAKNPPFHEVYTRKKQR 235
            KSYD  KRKH I Y+DG+VE LRLEKE WEL++K  K +K  + +     H      K +
Sbjct: 1404 KSYDSLKRKHVILYEDGDVEILRLEKERWELLDKGRKSTKIKRSSLETSGH------KLK 1457

Query: 236  SPRGSASKKTTKIANGKKSPSKHVKHGQKGASESNFDQD-AKESSEQSNPEEKMISKA-E 293
               GS SKK  KI NGK+SPSK  K  +K AS+S+F Q+ AKE+SE SNPEE MISKA E
Sbjct: 1458 GSSGSPSKKKKKIVNGKQSPSKPAKPRKKYASKSDFYQEQAKETSEISNPEETMISKADE 1517

Query: 294  IESGGSERE-QAEGSDVTKEXXXXXXXXXXX-HGXXXXXXXXXXXXXXPDEEKQENGKRL 351
             +SGGSE E  A  +++TK+             G               D++K++  +R+
Sbjct: 1518 TDSGGSEEELTAVHNEITKKGKKSNKKVRSVPRGKRLKKTKNFHHIEESDDDKRDYNERI 1577

Query: 352  SEDRESVPQEVQNDDEESTSEGRDVDESRGTLREHVNGEDEPGSEGNEIDPDVESSPQKV 411
            SEDRESVPQ         +SE + VDES    RE V+GE+E  SEG + + DV  SP + 
Sbjct: 1578 SEDRESVPQ--------YSSEEKKVDESSE--RESVHGEEESESEGEQDNSDVGDSPGET 1627

Query: 412  KKPLTELASPHDKRVPEVSDDEPL 435
            ++   E +SP D  + E+SD+ PL
Sbjct: 1628 ERSHIEPSSPDDVSIAEISDNIPL 1651


>Medtr4g134080.2 | sister chromatid cohesion PDS5-like protein | HC |
            chr4:56119398-56132067 | 20130731
          Length = 1657

 Score =  233 bits (593), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 171/382 (44%), Positives = 238/382 (62%), Gaps = 19/382 (4%)

Query: 57   LDVEIKPDKGSKTRQRKIVKGKK-SSLEPKAKASDSYHIEESDKSEEHDIKSPEYLEPTD 115
            LD EI PD  S+T +R +VK    SSL+ K K S+S+H +ES+K +++D+KSP+ LE  +
Sbjct: 1276 LDAEINPDTDSETMERIMVKDLLVSSLKQKFKGSESHHNDESNKHDDYDMKSPDDLEQNE 1335

Query: 116  KTESSNFKSSIGSTKELKRKSIGGISKCTTMKGDSDAEDLIGCRIKVWWPLDKQFYEGTV 175
            KT S+N KS    +K+ KRK + G++KC   +G+ D+EDLIGCRIK+WWP DK++Y GT+
Sbjct: 1336 KTLSNNSKSPTCFSKKTKRKRVAGLTKCAMKRGEIDSEDLIGCRIKIWWPTDKKYYGGTI 1395

Query: 176  KSYDPSKRKHKISYDDGEVEELRLEKEHWELINKDPKPSKKLKPAKNPPFHEVYTRKKQR 235
            KSYD  KRKH I Y+DG+VE LRLEKE WEL++K  K +KK+K +         +  K +
Sbjct: 1396 KSYDSLKRKHVILYEDGDVEILRLEKERWELLDKGRKSTKKIKRSSLET-----SGHKLK 1450

Query: 236  SPRGSASKKTTKIANGKKSPSKHVKHGQKGASESNFDQD-AKESSEQSNPEEKMISKAEI 294
               GS SKK  KI NGK+SPSK  K  +K AS+S+F Q+ AKE+SE SNPEE MISKA+ 
Sbjct: 1451 GSSGSPSKKKKKIVNGKQSPSKPAKPRKKYASKSDFYQEQAKETSEISNPEETMISKAD- 1509

Query: 295  ESGGSEREQAEGSDVTKEXXXXXXXXXXX-HGXXXXXXXXXXXXXXPDEEKQENGKRLSE 353
            E+   E   A  +++TK+             G               D++K++  +R+SE
Sbjct: 1510 ETDSEEELTAVHNEITKKGKKSNKKVRSVPRGKRLKKTKNFHHIEESDDDKRDYNERISE 1569

Query: 354  DRESVPQEVQNDDEESTSEGRDVDESRGTLREHVNGEDEPGSEGNEIDPDVESSPQKVKK 413
            DRESVPQ         +SE + VDES    RE V+GE+E  SEG + + DV  SP + ++
Sbjct: 1570 DRESVPQ--------YSSEEKKVDESSE--RESVHGEEESESEGEQDNSDVGDSPGETER 1619

Query: 414  PLTELASPHDKRVPEVSDDEPL 435
               E +SP D  + E+SD+ PL
Sbjct: 1620 SHIEPSSPDDVSIAEISDNIPL 1641


>Medtr3g106100.1 | nucleic acid-binding protein, putative | HC |
           chr3:48971316-48964581 | 20130731
          Length = 802

 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 45/58 (77%)

Query: 153 EDLIGCRIKVWWPLDKQFYEGTVKSYDPSKRKHKISYDDGEVEELRLEKEHWELINKD 210
           ++L+G R++VWWP D+QFY+G ++S+D  K+KHK+ YDDGEVE L L +E W +I  D
Sbjct: 529 QNLVGVRLEVWWPKDRQFYKGVIESFDSRKKKHKVVYDDGEVEVLNLAREKWNVIEAD 586


>Medtr4g006875.2 | sister chromatid cohesion PDS5-like protein | HC
           | chr4:842674-848397 | 20130731
          Length = 799

 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 33/61 (54%), Positives = 42/61 (68%)

Query: 155 LIGCRIKVWWPLDKQFYEGTVKSYDPSKRKHKISYDDGEVEELRLEKEHWELINKDPKPS 214
           L+G RIKVWWPLDK +YEG V +YD    KHK+ YDDG  E++ L+K  WEL + +  P 
Sbjct: 726 LVGKRIKVWWPLDKTYYEGAVSAYDHVNGKHKVLYDDGVEEQINLKKHRWELADVNVSPD 785

Query: 215 K 215
           K
Sbjct: 786 K 786


>Medtr4g006875.1 | sister chromatid cohesion PDS5-like protein | HC
           | chr4:842728-848441 | 20130731
          Length = 761

 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 33/61 (54%), Positives = 42/61 (68%)

Query: 155 LIGCRIKVWWPLDKQFYEGTVKSYDPSKRKHKISYDDGEVEELRLEKEHWELINKDPKPS 214
           L+G RIKVWWPLDK +YEG V +YD    KHK+ YDDG  E++ L+K  WEL + +  P 
Sbjct: 688 LVGKRIKVWWPLDKTYYEGAVSAYDHVNGKHKVLYDDGVEEQINLKKHRWELADVNVSPD 747

Query: 215 K 215
           K
Sbjct: 748 K 748


>Medtr1g014270.1 | lamin-B receptor of tudor domain protein | HC |
           chr1:3029508-3039200 | 20130731
          Length = 930

 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/107 (41%), Positives = 62/107 (57%), Gaps = 14/107 (13%)

Query: 115 DKTESSNFKSSIGSTKE----------LKRKSIGGISKCT-TMKGDSDAEDLIGCRIKVW 163
           DK   S+ KS+  +TK+          LKRK   G  K + T K D   + L+G R+KVW
Sbjct: 599 DKVTVSSLKSATKTTKDEHSEETPKTTLKRKRTPGKEKGSDTKKND---QSLVGKRVKVW 655

Query: 164 WPLDKQFYEGTVKSYDPSKRKHKISYDDGEVEELRLEKEHWELINKD 210
           WP D  FY+G V S+D S +KHK+ YDDG+ E L  ++E +E++  D
Sbjct: 656 WPDDNMFYKGVVDSFDSSTKKHKVLYDDGDEEILNFKEEKYEIVEVD 702


>Medtr7g109470.1 | DNA mismatch repair MSH3-like protein | HC |
           chr7:44767037-44759016 | 20130731
          Length = 1280

 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/64 (54%), Positives = 42/64 (65%), Gaps = 2/64 (3%)

Query: 155 LIGCRIKVWWPLDKQFYEGTVKSYDPSKRKHKISYDDGEVEELRLEKEHWELINKDPKPS 214
            IG RI+V+WPLD+ +YEGTVKS+D    KH+I YDD E E + L KE  E I      S
Sbjct: 90  FIGKRIRVYWPLDEAWYEGTVKSFDTVTSKHRIRYDDDEEESIDLSKEKIEWIQDS--SS 147

Query: 215 KKLK 218
           KKLK
Sbjct: 148 KKLK 151


>Medtr1g010290.1 | enhancer of polycomb-like transcription factor
           protein | HC | chr1:1894865-1888016 | 20130731
          Length = 1660

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 39/63 (61%)

Query: 145 TMKGDSDAEDLIGCRIKVWWPLDKQFYEGTVKSYDPSKRKHKISYDDGEVEELRLEKEHW 204
            + G  DA   +  RIKV+WPLD+ +Y G V  YD ++R H I YDD + E + L+ E +
Sbjct: 345 ILPGHVDAYWALNRRIKVFWPLDQSWYYGLVNDYDEAQRLHHIKYDDRDEEWINLQTERF 404

Query: 205 ELI 207
           +L+
Sbjct: 405 KLL 407


>Medtr7g021365.1 | histone-lysine N-methyltransferase ATX2-like
           protein | HC | chr7:6764175-6749832 | 20130731
          Length = 1069

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 35/55 (63%)

Query: 149 DSDAEDLIGCRIKVWWPLDKQFYEGTVKSYDPSKRKHKISYDDGEVEELRLEKEH 203
           D++ E  +G + KV+WP+D + Y G VKSYD   + H I YDDGE E L L  E+
Sbjct: 194 DANPEAFVGLKCKVYWPMDLKSYTGLVKSYDREAKIHHIEYDDGEEENLILSNEN 248


>Medtr7g021365.2 | histone-lysine N-methyltransferase ATX2-like
           protein | HC | chr7:6764175-6749832 | 20130731
          Length = 1069

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 35/55 (63%)

Query: 149 DSDAEDLIGCRIKVWWPLDKQFYEGTVKSYDPSKRKHKISYDDGEVEELRLEKEH 203
           D++ E  +G + KV+WP+D + Y G VKSYD   + H I YDDGE E L L  E+
Sbjct: 194 DANPEAFVGLKCKVYWPMDLKSYTGLVKSYDREAKIHHIEYDDGEEENLILSNEN 248


>Medtr7g021365.3 | histone-lysine N-methyltransferase ATX2-like
           protein | HC | chr7:6764175-6755447 | 20130731
          Length = 864

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 35/55 (63%)

Query: 149 DSDAEDLIGCRIKVWWPLDKQFYEGTVKSYDPSKRKHKISYDDGEVEELRLEKEH 203
           D++ E  +G + KV+WP+D + Y G VKSYD   + H I YDDGE E L L  E+
Sbjct: 194 DANPEAFVGLKCKVYWPMDLKSYTGLVKSYDREAKIHHIEYDDGEEENLILSNEN 248