Miyakogusa Predicted Gene

Lj6g3v1693510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1693510.1 Non Characterized Hit- tr|I1L088|I1L088_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.43844
PE,95.33,0,Vps53_N,Vps53-like, N-terminal; SUBFAMILY NOT NAMED,NULL;
VACUOLAR SORTING PROTEIN 53,NULL,CUFF.59851.1
         (214 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g028270.2 | vacuolar sorting-associated-like protein | HC ...   427   e-120
Medtr2g028270.1 | vacuolar sorting-associated-like protein | HC ...   427   e-120

>Medtr2g028270.2 | vacuolar sorting-associated-like protein | HC |
           chr2:10426065-10439315 | 20130731
          Length = 773

 Score =  427 bits (1099), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 211/214 (98%), Positives = 212/214 (99%)

Query: 1   MDKSSALEYINQMFPNEASLSGVEPLMQKIQNEIRTVDAGILSAVRQQSNSGTKAKEDLA 60
           MDKSSALEYINQMFPNEASLSGVEPLMQKIQNEIRTVDAGILSAVRQQSNSGTKAKEDLA
Sbjct: 1   MDKSSALEYINQMFPNEASLSGVEPLMQKIQNEIRTVDAGILSAVRQQSNSGTKAKEDLA 60

Query: 61  AATCAVEELMYKIREIKTKAVQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA 120
           AAT AVEELMYKIREIKTKAVQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
Sbjct: 61  AATRAVEELMYKIREIKTKAVQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA 120

Query: 121 VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKIIELREKFKNIKQILKSHVSSD 180
           VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKIIELREKFKNIKQILKSHV SD
Sbjct: 121 VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKIIELREKFKNIKQILKSHVFSD 180

Query: 181 FSSLGTGKETEETNLLQQLSDACLVVDALEPSVQ 214
           FSSLGTGKETEETNLLQQLSDACLVVDALEPSV+
Sbjct: 181 FSSLGTGKETEETNLLQQLSDACLVVDALEPSVK 214


>Medtr2g028270.1 | vacuolar sorting-associated-like protein | HC |
           chr2:10426065-10439315 | 20130731
          Length = 819

 Score =  427 bits (1099), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 211/214 (98%), Positives = 212/214 (99%)

Query: 1   MDKSSALEYINQMFPNEASLSGVEPLMQKIQNEIRTVDAGILSAVRQQSNSGTKAKEDLA 60
           MDKSSALEYINQMFPNEASLSGVEPLMQKIQNEIRTVDAGILSAVRQQSNSGTKAKEDLA
Sbjct: 1   MDKSSALEYINQMFPNEASLSGVEPLMQKIQNEIRTVDAGILSAVRQQSNSGTKAKEDLA 60

Query: 61  AATCAVEELMYKIREIKTKAVQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA 120
           AAT AVEELMYKIREIKTKAVQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
Sbjct: 61  AATRAVEELMYKIREIKTKAVQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA 120

Query: 121 VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKIIELREKFKNIKQILKSHVSSD 180
           VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKIIELREKFKNIKQILKSHV SD
Sbjct: 121 VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKIIELREKFKNIKQILKSHVFSD 180

Query: 181 FSSLGTGKETEETNLLQQLSDACLVVDALEPSVQ 214
           FSSLGTGKETEETNLLQQLSDACLVVDALEPSV+
Sbjct: 181 FSSLGTGKETEETNLLQQLSDACLVVDALEPSVK 214