Miyakogusa Predicted Gene

Lj6g3v1693490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1693490.1 Non Characterized Hit- tr|B4FL82|B4FL82_MAIZE
Uncharacterized protein OS=Zea mays PE=4
SV=1,48.48,5e-17,UNCHARACTERIZED,NULL; seg,NULL; SNARE_assoc,SNARE
associated Golgi protein,NODE_41345_length_1180_cov_77.446609.path2.1
         (314 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g028450.1 | SNARE associated family protein | HC | chr2:10...   475   e-134
Medtr5g011420.1 | SNARE associated family protein | HC | chr5:32...   213   2e-55
Medtr4g101920.1 | SNARE associated family protein | HC | chr4:42...   211   8e-55
Medtr3g064097.1 | SNARE associated family protein | HC | chr3:28...   127   2e-29
Medtr4g117280.2 | TVP38/TMEM64 family membrane slr0305-like prot...    78   1e-14
Medtr4g117280.1 | TVP38/TMEM64 family membrane slr0305-like prot...    78   1e-14
Medtr4g032670.1 | SNARE associated family protein | HC | chr4:11...    62   6e-10
Medtr2g022180.1 | TVP38/TMEM64 family membrane slr0305-like prot...    59   6e-09

>Medtr2g028450.1 | SNARE associated family protein | HC |
           chr2:10555701-10558445 | 20130731
          Length = 373

 Score =  475 bits (1223), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 227/295 (76%), Positives = 250/295 (84%), Gaps = 2/295 (0%)

Query: 17  GHHGRGRGSSEYVRLVISDEPRAVETEMIQPREESRINSFRWWMKVLLWCLASXXXXXXX 76
           GHH RG  S+EYVRL ISDEPR  E EM+QP+ ESRI SF+WWMKV +W           
Sbjct: 57  GHHVRG--STEYVRLAISDEPRVAEAEMLQPQAESRITSFKWWMKVSIWGFIIVILSLLL 114

Query: 77  XXXXXPFVFEKILYPTMEWEATAFGRPXXXXXXXXXXXXFPVILFPSGPSMWLAGMIFGY 136
                PF FEK+LYP MEWEATAFGRP            FPV+L PSGPSMWLAGMIFGY
Sbjct: 115 VKWGVPFAFEKVLYPVMEWEATAFGRPVLALVLIASLALFPVLLIPSGPSMWLAGMIFGY 174

Query: 137 GLGFVIIMVGTTIGMVLPYLIGLLFRDRIHQWLKKWPQNAEMIRLAGEGSWFHQFQMVAL 196
           GLGFVIIMVGTTIGMVLPYLIGL FRDRIHQWL+KWPQNA MIRLAGEGSWFHQFQ+VAL
Sbjct: 175 GLGFVIIMVGTTIGMVLPYLIGLKFRDRIHQWLEKWPQNAAMIRLAGEGSWFHQFQVVAL 234

Query: 197 FRISPFPYTIFNYAIVVTNMRFWPYLCGSIAGMVPEAFLYIYSGRLIRTLADAQYGKHHL 256
           FR SPFPYTIFNYA+VVT+M+FWPY CGS+AGMVPEAF+YIYSGRLI++LADAQYG+HH+
Sbjct: 235 FRTSPFPYTIFNYAVVVTDMKFWPYFCGSVAGMVPEAFIYIYSGRLIKSLADAQYGRHHM 294

Query: 257 TTVEIVYNIISFIIAVVTIVGFTVYAKRTLNELKMAEANEEAASVSGNASLEIEK 311
           TTVEIVYNIISFIIAV+TIVGFTVYAKRTLN+LK+AEANEEAASVSGNASLE++K
Sbjct: 295 TTVEIVYNIISFIIAVITIVGFTVYAKRTLNKLKIAEANEEAASVSGNASLEMKK 349


>Medtr5g011420.1 | SNARE associated family protein | HC |
           chr5:3274387-3272739 | 20130731
          Length = 318

 Score =  213 bits (542), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 95/212 (44%), Positives = 134/212 (63%)

Query: 82  PFVFEKILYPTMEWEATAFGRPXXXXXXXXXXXXFPVILFPSGPSMWLAGMIFGYGLGFV 141
           PF  +K+  P + W+   F               FP I  PS PSMW+AGM FGY  GF 
Sbjct: 101 PFFIQKVFIPVIIWQRDTFTTSELAIYVFASIALFPTIFLPSSPSMWVAGMTFGYFFGFF 160

Query: 142 IIMVGTTIGMVLPYLIGLLFRDRIHQWLKKWPQNAEMIRLAGEGSWFHQFQMVALFRISP 201
           ++M   ++G+ LP+    +F  +I +WL ++P+ A ++R AG G+WFHQF+ VAL R+SP
Sbjct: 161 LVMSAASVGVSLPFFTSKMFHHKIEEWLDQYPKEASVLRSAGGGNWFHQFRAVALIRVSP 220

Query: 202 FPYTIFNYAIVVTNMRFWPYLCGSIAGMVPEAFLYIYSGRLIRTLADAQYGKHHLTTVEI 261
           FPY I+NY    TN+++ PYLCGS+AGM+PE    IY+G LIR LA+  +  H L+  +I
Sbjct: 221 FPYMIYNYCATATNVQYGPYLCGSLAGMLPEVIASIYTGILIRALANVSHKTHGLSAPQI 280

Query: 262 VYNIISFIIAVVTIVGFTVYAKRTLNELKMAE 293
            +N++ F IAV T + FT+YAKR LNEL+  E
Sbjct: 281 AFNVVGFCIAVATTIFFTIYAKRRLNELRQEE 312


>Medtr4g101920.1 | SNARE associated family protein | HC |
           chr4:42167255-42163145 | 20130731
          Length = 313

 Score =  211 bits (537), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 112/277 (40%), Positives = 164/277 (59%), Gaps = 7/277 (2%)

Query: 19  HGRGRGSSEYVRLVI-SDEPRAVETEMIQPREESRINSFR----WWMKVLLWCLASXXXX 73
                   +Y++L+  SDE   +    ++  EE  + S R    +W+K++L  L+     
Sbjct: 30  EADDDNKGDYIKLIPGSDE--CLPLTAVEMVEECSLPSRRSVVWYWVKMVLLFLSLGFLA 87

Query: 74  XXXXXXXXPFVFEKILYPTMEWEATAFGRPXXXXXXXXXXXXFPVILFPSGPSMWLAGMI 133
                   P++ +K + P + WE   F  P            FP IL PS PSMW+AG+ 
Sbjct: 88  VAVLKWVGPYLIDKEVIPIINWETETFSPPVLTILLFASVAIFPTILLPSTPSMWVAGVT 147

Query: 134 FGYGLGFVIIMVGTTIGMVLPYLIGLLFRDRIHQWLKKWPQNAEMIRLAGEGSWFHQFQM 193
            GYG GF++I+    IG+ LP++IG +F  +I  WL+K+P+ A +++ AG G+WFHQF+ 
Sbjct: 148 LGYGFGFLLIITAAAIGVSLPFIIGSIFHHKIEGWLEKYPKKASILKSAGAGNWFHQFRA 207

Query: 194 VALFRISPFPYTIFNYAIVVTNMRFWPYLCGSIAGMVPEAFLYIYSGRLIRTLADAQYGK 253
           VAL RISPFPY +FNY  V TN+++ PY+ GS+ GMVPE F+ IY+G LI+TLADA   +
Sbjct: 208 VALIRISPFPYMVFNYCAVATNVKYGPYIIGSLVGMVPEIFVAIYTGILIKTLADASNER 267

Query: 254 HHLTTVEIVYNIISFIIAVVTIVGFTVYAKRTLNELK 290
             L+  +I+ N + F + VVT V  TVYAKR L EL+
Sbjct: 268 QSLSAQQIILNALGFCLTVVTTVIITVYAKRRLKELQ 304


>Medtr3g064097.1 | SNARE associated family protein | HC |
           chr3:28829690-28829424 | 20130731
          Length = 80

 Score =  127 bits (318), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 56/72 (77%), Positives = 65/72 (90%)

Query: 178 MIRLAGEGSWFHQFQMVALFRISPFPYTIFNYAIVVTNMRFWPYLCGSIAGMVPEAFLYI 237
           MIRLAGEGSWFHQFQ+VALFR SPFPYTIFNYA+VVT+M+FWPY CGS+AGMVPEAF+YI
Sbjct: 1   MIRLAGEGSWFHQFQVVALFRTSPFPYTIFNYAVVVTDMKFWPYFCGSVAGMVPEAFIYI 60

Query: 238 YSGRLIRTLADA 249
           YS   + +L D+
Sbjct: 61  YSFVFLFSLYDS 72


>Medtr4g117280.2 | TVP38/TMEM64 family membrane slr0305-like protein
           | HC | chr4:48600709-48596099 | 20130731
          Length = 274

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 7/185 (3%)

Query: 131 GMIFGYGLGFVIIMVGTTIGMVLPYLIG-LLFRDRIHQWLKKWPQNAEMIRLAGEGSWFH 189
           G +FG  +G V   VG TIG V  +L+G  + +  +   LK +PQ  + + +A + S   
Sbjct: 75  GYLFGLPVGIVADSVGATIGAVAAFLLGGTIGKSFVASKLKDYPQ-FKSVSIATQRS--- 130

Query: 190 QFQMVALFRISPF-PYTIFNYAIVVTNMRFWPYLCGSIAGMVPEAFLYIYSGRLIRTLAD 248
            F++V L R+ P  PY I NY + VT +  W Y   S  GM+P     +Y+G  ++ ++D
Sbjct: 131 GFKIVFLLRLVPLLPYNILNYLLSVTPVPLWEYTLASWLGMMPLTVALVYAGTTLKDISD 190

Query: 249 AQYGKHHLTTVEIVYNIISFIIAVVTIVGFTVYAKRTLNELKMAEANEEAASVSGNASLE 308
             +G    +       I S +I+VV ++  T  AK  L++  +AE  ++    + +  L 
Sbjct: 191 VTHGWGEFSKTRWAMIIFSLVISVVMMICVTKVAKSALDK-ALAECEKDMDDTTSSEQLI 249

Query: 309 IEKAS 313
           + + S
Sbjct: 250 VTETS 254


>Medtr4g117280.1 | TVP38/TMEM64 family membrane slr0305-like protein
           | HC | chr4:48600647-48596094 | 20130731
          Length = 294

 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 7/185 (3%)

Query: 131 GMIFGYGLGFVIIMVGTTIGMVLPYLIG-LLFRDRIHQWLKKWPQNAEMIRLAGEGSWFH 189
           G +FG  +G V   VG TIG V  +L+G  + +  +   LK +PQ  + + +A + S   
Sbjct: 95  GYLFGLPVGIVADSVGATIGAVAAFLLGGTIGKSFVASKLKDYPQ-FKSVSIATQRS--- 150

Query: 190 QFQMVALFRISPF-PYTIFNYAIVVTNMRFWPYLCGSIAGMVPEAFLYIYSGRLIRTLAD 248
            F++V L R+ P  PY I NY + VT +  W Y   S  GM+P     +Y+G  ++ ++D
Sbjct: 151 GFKIVFLLRLVPLLPYNILNYLLSVTPVPLWEYTLASWLGMMPLTVALVYAGTTLKDISD 210

Query: 249 AQYGKHHLTTVEIVYNIISFIIAVVTIVGFTVYAKRTLNELKMAEANEEAASVSGNASLE 308
             +G    +       I S +I+VV ++  T  AK  L++  +AE  ++    + +  L 
Sbjct: 211 VTHGWGEFSKTRWAMIIFSLVISVVMMICVTKVAKSALDK-ALAECEKDMDDTTSSEQLI 269

Query: 309 IEKAS 313
           + + S
Sbjct: 270 VTETS 274


>Medtr4g032670.1 | SNARE associated family protein | HC |
           chr4:11261721-11269691 | 20130731
          Length = 331

 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 73/131 (55%), Gaps = 6/131 (4%)

Query: 118 VILFPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLLF-RDRIHQWLKKWPQNA 176
           ++  P+ P    AG++FG   G +I+ +  T+   + +LI   F R+RI + ++   +  
Sbjct: 159 ILAIPAIPLTMSAGLLFGSLTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFL 218

Query: 177 EMIRLAGEGSWFHQFQMVALFRISPF-PYTIFNYAIVVTNMRFWPYLCGSIAGMVPEAFL 235
            + +  GE    + F++V L R+SP  P+++ NY   +T+++F PY+ GS  GM+P  + 
Sbjct: 219 AIDKAIGE----NGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFLPYVLGSWLGMLPGTWA 274

Query: 236 YIYSGRLIRTL 246
           Y+ +G   R +
Sbjct: 275 YVSAGAFGRAI 285


>Medtr2g022180.1 | TVP38/TMEM64 family membrane slr0305-like protein
           | HC | chr2:7614462-7621452 | 20130731
          Length = 274

 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 6/180 (3%)

Query: 131 GMIFGYGLGFVIIMVGTTIGMVLPYLIG-LLFRDRIHQWLKKWPQNAEMIRLAGEGSWFH 189
           G +FG  +GFV   +G T+G    +L+G  + R  +   LK +P+  + + +A   S F 
Sbjct: 75  GYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRPFVVSRLKDYPK-FKSVAIAIRRSGFK 133

Query: 190 QFQMVALFRISPFPYTIFNYAIVVTNMRFWPYLCGSIAGMVPEAFLYIYSGRLIRTLADA 249
              ++ L  + PF   + NY + VT +    Y+  S  GM+P     +Y G  ++ L+D 
Sbjct: 134 IVLLLRLVPLLPF--NMLNYLLSVTPVSLVEYMLASWLGMMPITLALVYVGTTLKDLSDV 191

Query: 250 QYGKHHLTTVEIVYNIISFIIAVVTIVGFTVYAKRTLNELKMAEANEEAASVSGNASLEI 309
            +G +  +     + II  I++VV ++  T  AK  L++  +AE NE+   V+ +  L I
Sbjct: 192 THGWNEFSKSRWAFIIIGLIVSVVLMICVTKVAKSALDK-ALAE-NEDIDGVTSSPELPI 249