Miyakogusa Predicted Gene

Lj6g3v1693090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1693090.1 Non Characterized Hit- tr|B9R8H5|B9R8H5_RICCO
Ubiquitin-protein ligase, putative OS=Ricinus
communis,24.05,0.0000000001,A Receptor for Ubiquitination
Targets,F-box domain, cyclin-like; no description,NULL; F-box,F-box
do,gene.g66554.t1.1
         (366 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g069800.1 | F-box protein | LC | chr7:25733806-25732646 | ...    72   9e-13
Medtr7g069820.1 | F-box protein | LC | chr7:25741507-25740350 | ...    70   3e-12
Medtr3g114970.1 | ubiquitin-protein ligase | HC | chr3:53695038-...    63   4e-10
Medtr3g114970.2 | ubiquitin-protein ligase | HC | chr3:53695038-...    63   4e-10
Medtr7g069850.1 | hypothetical protein | LC | chr7:25756191-2575...    53   4e-07

>Medtr7g069800.1 | F-box protein | LC | chr7:25733806-25732646 |
           20130731
          Length = 386

 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 171/405 (42%), Gaps = 75/405 (18%)

Query: 1   MQAELLELVLRSLDRRDYLKCRLVCRGWRSIVNGAIKNKG-PPTPRFPARLLLPPTLLCN 59
           + A++LEL+++ L  +DYL+ R +CR  R IV+  I+NK   P P  P+   L    L  
Sbjct: 12  LPADVLELIMKRLPLKDYLRLRAICRSCRKIVSNIIENKHCCPLPELPS---LSTKSLHR 68

Query: 60  TGDPATLFDDITRDNRLLRVPTHVGKGHFASLRSEEEGWLMFQSICNN---LLWIFNPVS 116
              P            LLR  T +G           +GWL+           ++  NPVS
Sbjct: 69  VRTP------------LLRDNTCIG---------SVDGWLIVSDYSEKGFAKVFFLNPVS 107

Query: 117 SESYKLPQLPPGHTIPYNLRVAFSSQSYLVVISLYSADDKDGSIPQLC-----FCRVD-- 169
                +P      +  Y   +     SY+  ++  S  + DGS   L      +C +   
Sbjct: 108 DVRITIP------SKLYLSSIIGQRISYVSKMTASSKPNCDGSDCYLAGLLSDYCHIAIY 161

Query: 170 --NDKSWSRIE-TIESRFEVKDIMLLGWKLYAMN--EDFVTIFNLED-LNAITAERLVMQ 223
              +KSW+ +E   +S     DI ++G KLY +    D + +++L+D  NA     ++ +
Sbjct: 162 KLFEKSWTIVEPDKDSGTYFTDIEIIGTKLYVIGSLSDSILVYDLKDSTNAPRKPEVLAE 221

Query: 224 LPKLDSDGERVNMHRLARDPTCGEVLLV-LFRCKYMSHDYEIED---------------- 266
           LP+  + G  +    LA+D T  E+ L+ +F    +  +  I D                
Sbjct: 222 LPRALA-GSSIYSSFLAKDKTLRELYLIYVFYNGEIDTEQHISDRFNVVSSFVKPPKLTS 280

Query: 267 FLIFKLDMS-GPRWIEVHSLSGRVLFVDRAGVRVISTANLNAPPKFIGVDNCVFFSLHH- 324
           F +FKLD +  P   +   L  +V FV      V+S   LN   + +   N ++F++   
Sbjct: 281 FEVFKLDTNKSPIGWQNVKLEDKVAFVSNCKSMVMSRDELNYSEELVR-GNSIYFAITFP 339

Query: 325 --LINPC----LGVFYLKEKTIQPLNSNLSLEKQL-WRSLWFTPS 362
              INP      G+F L +++I+      S   ++ +  LWF PS
Sbjct: 340 CPKINPPTSLEFGIFCLNDRSIKYFPEETSKHGEVPYYPLWFVPS 384


>Medtr7g069820.1 | F-box protein | LC | chr7:25741507-25740350 |
           20130731
          Length = 385

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 167/402 (41%), Gaps = 70/402 (17%)

Query: 1   MQAELLELVLRSLDRRDYLKCRLVCRGWRSIVNGAIKNKG-PPTPRFPARLLLPPTLLCN 59
           +  ++LEL+++ L  +DYL+ R +CR  R IV+  I+NK   P P  P+   L    L  
Sbjct: 12  LPVDVLELIMKRLPLKDYLRLRAICRSCRKIVSNIIENKHCCPLPELPS---LSTKSLHR 68

Query: 60  TGDPATLFDDITRDNRLLRVPTHVGKGHFASLRSEEEGWLMFQSICNN---LLWIFNPVS 116
              P            LLR  T +G           +GWL+           ++  NPV+
Sbjct: 69  VRTP------------LLRDNTCIG---------SVDGWLIVSDNSEKGFAKIFFLNPVT 107

Query: 117 SESYKLP---QLPP--GHTIPYNLRVAFSSQSYLVVISLYSADDKDGSIPQLCFCRVDN- 170
                +P    LP   G +I Y  ++  SS+        Y A    G     C   +   
Sbjct: 108 DVRITIPSKLHLPSIVGQSISYVTKLTASSKPNCDGSDCYLA----GLFSDYCHIAIYKL 163

Query: 171 -DKSWSRIET-IESRFEVKDIMLLGWKLYAMN--EDFVTIFNLED-LNAITAERLVMQLP 225
            +KSW+ +E+  +S     DI ++G KLY +    D + +++L+D  NA     ++ +LP
Sbjct: 164 FEKSWTIVESDKDSGTYFTDIEIIGTKLYVIGSLSDSILVYDLKDSTNAPRKAEVLAELP 223

Query: 226 KLDSDGERVNMHRLARDPTCGEVLLV-LFRCKYMSHDYEIED----------------FL 268
           +  + G  ++   LA+D    E+ L+ +F    +  +  I D                F 
Sbjct: 224 RAPA-GSSIHSSFLAKDKMLRELYLISVFYNGEIDTEQHISDRFNVVSSFVKPPKLTSFE 282

Query: 269 IFKLDMS-GPRWIEVHSLSGRVLFVDRAGVRVISTANLNAPPKFIGVDNCVFFSLHH--- 324
           +FKLD +  P   +   L  +V FV      V++   LN   + +   N ++F++     
Sbjct: 283 VFKLDTNKSPIGWQNVKLEDKVAFVSNWKSMVLARDELNYSEELVR-GNSIYFAITFPCP 341

Query: 325 LINPC----LGVFYLKEKTIQPLNSNLSLEKQLWRSLWFTPS 362
            INP      G+F L + +I+      S    +   LWF PS
Sbjct: 342 KINPPTSLEFGMFCLNDSSIKYFPEETSKHGDVPCPLWFVPS 383


>Medtr3g114970.1 | ubiquitin-protein ligase | HC |
           chr3:53695038-53697439 | 20130731
          Length = 354

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 156/389 (40%), Gaps = 68/389 (17%)

Query: 3   AELLELVLRSLDRR-----DYLKCRLVCRGWRSIVNGAIKNKGPPTPRFPARLLLPPTLL 57
           AEL + ++ S+ +R     DY++ R VCR W S V        P TP     L LPP L 
Sbjct: 6   AELPQEIIESISKRLTIYADYIRFRCVCRTWNSSV--------PKTP-----LHLPPQLP 52

Query: 58  CNTGDPATLFDDITRDNRLLRVPTHVGKGHFASLRSEEEGWLMFQSICNNLLWIFNPVSS 117
                  + FD  T     L  P   G      +     GWL+     +NL  + NPV+ 
Sbjct: 53  ILMLSDESFFDLSTNKIHRLNFPLPSGP---TRICGSSHGWLVILDETSNLN-LLNPVTH 108

Query: 118 ESYKLPQLPPGHTIPYNLRVAFS---SQSYLVVISLYSADDKDGSIP--------QLCFC 166
            +  LP L   HT PY ++  F+   +  YL+ + L S    +             L FC
Sbjct: 109 ATLSLPSL---HTFPYLVKKLFAFNKNNLYLIKVVLSSNPSPNDDFAAFAILGLRHLAFC 165

Query: 167 RVDNDKSWSRIETIESRFEVKDIMLLGWKLYAMNEDFVTIFNLEDLNAITAERLVMQLPK 226
           R   D SW  ++         D +      +AM+            + ITA   V++ P+
Sbjct: 166 RKGCD-SWVLLDANVGD-HWTDAVYKNGSFFAMST-----------SGITAVCDVVEGPR 212

Query: 227 LDSDGERVNMHR--LARDPTCGEVLLVLFRC---KYMSHDYE------IEDFLIFKLDMS 275
           +       +++   +      GE +L++ RC   +Y   D+E         F I+K++ +
Sbjct: 213 VSYIPPPTSLYYNDVFYAVFSGEEMLLIQRCCTEEYEPRDFEPYPDMSTVKFWIYKMNWN 272

Query: 276 GPRWIEVHSLSGRVLFVDRAGVRVISTANLNAPPKFIG-VDNCVFFSLHHLINPCLGVFY 334
             +W E+ +L    LF+ +      S A+      F G   NC++F+         G++ 
Sbjct: 273 MLKWEEIQTLGEHSLFIGKNYSLSFSAAD------FAGCCPNCIYFTDDIGGKHDHGIYS 326

Query: 335 LKEKTIQPLNSNLSLEKQLWRSLWFTPSP 363
           L +++I+ L  +          +W TP+P
Sbjct: 327 LSDESIELLPCD-PQNCGFGYPVWVTPNP 354


>Medtr3g114970.2 | ubiquitin-protein ligase | HC |
           chr3:53695038-53697439 | 20130731
          Length = 354

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 156/389 (40%), Gaps = 68/389 (17%)

Query: 3   AELLELVLRSLDRR-----DYLKCRLVCRGWRSIVNGAIKNKGPPTPRFPARLLLPPTLL 57
           AEL + ++ S+ +R     DY++ R VCR W S V        P TP     L LPP L 
Sbjct: 6   AELPQEIIESISKRLTIYADYIRFRCVCRTWNSSV--------PKTP-----LHLPPQLP 52

Query: 58  CNTGDPATLFDDITRDNRLLRVPTHVGKGHFASLRSEEEGWLMFQSICNNLLWIFNPVSS 117
                  + FD  T     L  P   G      +     GWL+     +NL  + NPV+ 
Sbjct: 53  ILMLSDESFFDLSTNKIHRLNFPLPSGP---TRICGSSHGWLVILDETSNLN-LLNPVTH 108

Query: 118 ESYKLPQLPPGHTIPYNLRVAFS---SQSYLVVISLYSADDKDGSIP--------QLCFC 166
            +  LP L   HT PY ++  F+   +  YL+ + L S    +             L FC
Sbjct: 109 ATLSLPSL---HTFPYLVKKLFAFNKNNLYLIKVVLSSNPSPNDDFAAFAILGLRHLAFC 165

Query: 167 RVDNDKSWSRIETIESRFEVKDIMLLGWKLYAMNEDFVTIFNLEDLNAITAERLVMQLPK 226
           R   D SW  ++         D +      +AM+            + ITA   V++ P+
Sbjct: 166 RKGCD-SWVLLDANVGD-HWTDAVYKNGSFFAMST-----------SGITAVCDVVEGPR 212

Query: 227 LDSDGERVNMHR--LARDPTCGEVLLVLFRC---KYMSHDYE------IEDFLIFKLDMS 275
           +       +++   +      GE +L++ RC   +Y   D+E         F I+K++ +
Sbjct: 213 VSYIPPPTSLYYNDVFYAVFSGEEMLLIQRCCTEEYEPRDFEPYPDMSTVKFWIYKMNWN 272

Query: 276 GPRWIEVHSLSGRVLFVDRAGVRVISTANLNAPPKFIG-VDNCVFFSLHHLINPCLGVFY 334
             +W E+ +L    LF+ +      S A+      F G   NC++F+         G++ 
Sbjct: 273 MLKWEEIQTLGEHSLFIGKNYSLSFSAAD------FAGCCPNCIYFTDDIGGKHDHGIYS 326

Query: 335 LKEKTIQPLNSNLSLEKQLWRSLWFTPSP 363
           L +++I+ L  +          +W TP+P
Sbjct: 327 LSDESIELLPCD-PQNCGFGYPVWVTPNP 354


>Medtr7g069850.1 | hypothetical protein | LC |
           chr7:25756191-25755091 | 20130731
          Length = 366

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 88/398 (22%), Positives = 158/398 (39%), Gaps = 77/398 (19%)

Query: 8   LVLRSLDRRDYLKCRLVCRGWRSIVNGAIKNKG-PPTPRFPARLLLPPTLLCNTGDPATL 66
           ++++ L  +DYL+ R +CR  R  V+  I+NK   P P  P+  L   +LLC        
Sbjct: 1   MIMKRLPLKDYLRLRAICRSCRETVSNIIENKHCCPLPEMPS--LSTKSLLC-------- 50

Query: 67  FDDITRDNRLLRVPTHVGKGHFASLRSEEEGWLMFQSICNN---LLWIFNPVSSESYKLP 123
                     LR P         S+    EGWL+     +      +  NPV+     +P
Sbjct: 51  ----------LRTPLLKSNKCIGSV----EGWLIVVDNSDKGFAKFFFLNPVTDVRITIP 96

Query: 124 QLPPGHTIPYNLRVAFSSQSYLVVISLYSADDKDGSIPQLC-----FCRVD----NDKSW 174
                     +L      + Y+  ++  S  + DGS   L      +C +      +KSW
Sbjct: 97  S-------KLHLPSIIGQRIYVRKMTASSKPNCDGSDCYLVGLLSDYCHIAIYKLFEKSW 149

Query: 175 SRIE-TIESRFEVKDIMLLGWKLYAM--NEDFVTIFNLED-LNAITAERLVMQLPKLDSD 230
           + +E   +S     DI ++G KLY +  + + + +++L+D  N     +++ + P++ + 
Sbjct: 150 TIVEPDKDSGTYFTDIEIIGRKLYVIGSSSNSILVYDLKDSTNGPPKAQVLAEFPRMPAG 209

Query: 231 GERVNMHRLARDPTCGEVLLV--LFRCKYMSHDY---------------EIEDFLIFKLD 273
                +  LA+D T  E+  +   + C+  +                   +  F +FKLD
Sbjct: 210 SSSYCIF-LAKDKTLRELYFISMFYNCEIETQRVVSDRFSIILAYAKPPHVTCFEVFKLD 268

Query: 274 M--SGPRWIEVHSLSGRVLFVDRAGVRVISTANLNAPPKFIGVDNCVFFSLHHLI---NP 328
              S   W  V  L  +V+F+      VIS   LN   + +   N ++F++       NP
Sbjct: 269 TNKSPIGWQNVR-LDDKVVFLSCCKSMVISRDELNNIEELVR-GNSIYFAVTFRCPRYNP 326

Query: 329 C----LGVFYLKEKTIQPLNSNLSLEKQLWRSLWFTPS 362
                 G+F L + +I+           +   +WF PS
Sbjct: 327 STSLEFGMFCLNDSSIKYFPEKTLKHGDVLHPVWFVPS 364