Miyakogusa Predicted Gene
- Lj6g3v1692490.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1692490.1 tr|G7ZYQ0|G7ZYQ0_MEDTR High affinity cationic
amino acid transporter OS=Medicago truncatula
GN=MTR_0,48.41,2e-18,CATIONIC AMINO ACID TRANSPORTER,Cationic amino
acid transporter; AMINO ACID TRANSPORTER,Amino acid/p,CUFF.59792.1
(129 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g111740.1 | cationic amino acid transporter | HC | chr1:50... 97 4e-21
Medtr2g035430.1 | cationic amino acid transporter | HC | chr2:15... 70 4e-13
Medtr8g089360.2 | cationic amino acid transporter-like protein |... 69 7e-13
Medtr8g089360.1 | cationic amino acid transporter-like protein |... 69 8e-13
Medtr4g099270.1 | cationic amino acid transporter | HC | chr4:41... 67 6e-12
Medtr8g089320.1 | cationic amino acid transporter-like protein |... 66 6e-12
Medtr4g099270.4 | cationic amino acid transporter | HC | chr4:41... 65 2e-11
Medtr4g099270.2 | cationic amino acid transporter | HC | chr4:41... 65 2e-11
Medtr1g030660.1 | cationic amino acid transporter | HC | chr1:10... 62 1e-10
Medtr8g461380.1 | cationic amino acid transporter | HC | chr8:21... 56 9e-09
Medtr8g089342.1 | cationic amino acid transporter | HC | chr8:37... 52 1e-07
Medtr6g034535.1 | cationic amino acid transporter, putative | HC... 47 3e-06
Medtr6g027680.1 | cationic amino acid transporter 2, vacuolar pr... 46 8e-06
>Medtr1g111740.1 | cationic amino acid transporter | HC |
chr1:50530610-50526388 | 20130731
Length = 582
Score = 97.1 bits (240), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 65/126 (51%), Gaps = 42/126 (33%)
Query: 5 TNHPSSFSSFRAYLKTVAHTPSRLARRAVSV----------------------------- 35
T+H SSFSS YL+ VA TPSR ARR SV
Sbjct: 2 TSHGSSFSSLPNYLQAVAKTPSRFARRGFSVSTSYEEMSRVRARSGNSMRKSLRWFDLVS 61
Query: 36 -------------TTGRAAHDYAGSAFKLSYAIFGLCALLSAFCYTEFVVDMPVAGGAFS 82
TTG A +AG + LSYAI G CALLSAFCYTEF VDMPVAGGAFS
Sbjct: 62 FGIGGMVGAGVFVTTGHATRVHAGPSVVLSYAIAGFCALLSAFCYTEFAVDMPVAGGAFS 121
Query: 83 YLRVTF 88
YLRVTF
Sbjct: 122 YLRVTF 127
>Medtr2g035430.1 | cationic amino acid transporter | HC |
chr2:15116647-15114611 | 20130731
Length = 591
Score = 70.1 bits (170), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/55 (54%), Positives = 42/55 (76%)
Query: 32 AVSVTTGRAAHDYAGSAFKLSYAIFGLCALLSAFCYTEFVVDMPVAGGAFSYLRV 86
+ V TG+ AH++AG+A LSY G+ A+LS FCYTEF V++P AGG+F+YLR+
Sbjct: 93 GIFVLTGQEAHNHAGAAIVLSYVASGISAMLSVFCYTEFAVEVPAAGGSFAYLRI 147
>Medtr8g089360.2 | cationic amino acid transporter-like protein | HC
| chr8:37134143-37137572 | 20130731
Length = 582
Score = 69.3 bits (168), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 32 AVSVTTGRAAHDYAGSAFKLSYAIFGLCALLSAFCYTEFVVDMPVAGGAFSYLRV 86
+ V TG A + AG A LSYA+ G+ ALLS FCYTEF V++PVAGG+F+YLRV
Sbjct: 81 GIFVLTGLEAREEAGPAVVLSYAVSGISALLSVFCYTEFAVEIPVAGGSFAYLRV 135
>Medtr8g089360.1 | cationic amino acid transporter-like protein | HC
| chr8:37134143-37137572 | 20130731
Length = 599
Score = 69.3 bits (168), Expect = 8e-13, Method: Composition-based stats.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 32 AVSVTTGRAAHDYAGSAFKLSYAIFGLCALLSAFCYTEFVVDMPVAGGAFSYLRV 86
+ V TG A + AG A LSYA+ G+ ALLS FCYTEF V++PVAGG+F+YLRV
Sbjct: 98 GIFVLTGLEAREEAGPAVVLSYAVSGISALLSVFCYTEFAVEIPVAGGSFAYLRV 152
>Medtr4g099270.1 | cationic amino acid transporter | HC |
chr4:41138315-41135137 | 20130731
Length = 554
Score = 66.6 bits (161), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/58 (56%), Positives = 40/58 (68%)
Query: 36 TTGRAAHDYAGSAFKLSYAIFGLCALLSAFCYTEFVVDMPVAGGAFSYLRVTFASSEG 93
TTG A +G + +SY I G+ ALLS+ CYTEF V +PVAGGAFSYLR+TF G
Sbjct: 47 TTGPVALHQSGPSVFISYIIAGISALLSSLCYTEFAVQVPVAGGAFSYLRLTFGEFLG 104
>Medtr8g089320.1 | cationic amino acid transporter-like protein | HC
| chr8:37113843-37110613 | 20130731
Length = 604
Score = 66.2 bits (160), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/55 (58%), Positives = 39/55 (70%)
Query: 32 AVSVTTGRAAHDYAGSAFKLSYAIFGLCALLSAFCYTEFVVDMPVAGGAFSYLRV 86
+ V TG A AG A LS+ I G+ ALLS FCYTEF V++PVAGG+F+YLRV
Sbjct: 93 GIFVLTGLEARQEAGPAVVLSFVISGISALLSVFCYTEFAVEIPVAGGSFAYLRV 147
>Medtr4g099270.4 | cationic amino acid transporter | HC |
chr4:41138462-41136638 | 20130731
Length = 309
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 36 TTGRAAHDYAGSAFKLSYAIFGLCALLSAFCYTEFVVDMPVAGGAFSYLRVTFASSEGAT 95
TTG A +G + +SY I G+ ALLS+ CYTEF V +PVAGGAFSYLR+TF G
Sbjct: 68 TTGPVALHQSGPSVFISYIIAGISALLSSLCYTEFAVQVPVAGGAFSYLRLTFGEFLGYF 127
Query: 96 RRNGGSQCLL 105
GG+ L+
Sbjct: 128 ---GGANILM 134
>Medtr4g099270.2 | cationic amino acid transporter | HC |
chr4:41138444-41135994 | 20130731
Length = 398
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 36 TTGRAAHDYAGSAFKLSYAIFGLCALLSAFCYTEFVVDMPVAGGAFSYLRVTFASSEGAT 95
TTG A +G + +SY I G+ ALLS+ CYTEF V +PVAGGAFSYLR+TF G
Sbjct: 68 TTGPVALHQSGPSVFISYIIAGISALLSSLCYTEFAVQVPVAGGAFSYLRLTFGEFLGYF 127
Query: 96 RRNGGSQCLL 105
GG+ L+
Sbjct: 128 ---GGANILM 134
>Medtr1g030660.1 | cationic amino acid transporter | HC |
chr1:10679998-10681898 | 20130731
Length = 601
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 32 AVSVTTGRAAHDYAGSAFKLSYAIFGLCALLSAFCYTEFVVDMPVAGGAFSYLRV 86
+ V TG + G A LSY + G+ A+LS FCYTEF V++PVAGG+F+Y+RV
Sbjct: 88 GIFVLTGLEVKNTVGPAVVLSYIVSGISAMLSVFCYTEFAVEIPVAGGSFAYIRV 142
>Medtr8g461380.1 | cationic amino acid transporter | HC |
chr8:21598395-21596115 | 20130731
Length = 590
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 33 VSVTTGRAAHDYAGSAFKLSYAIFGLCALLSAFCYTEFVVDMPVAGGAFSYLRV 86
+ V TG+ A AG + LSYA G ALLSA Y EF V++PVAGG+FS+LR+
Sbjct: 101 IFVVTGQEARFDAGPSIILSYAASGFSALLSALIYAEFAVEVPVAGGSFSFLRI 154
>Medtr8g089342.1 | cationic amino acid transporter | HC |
chr8:37126584-37126100 | 20130731
Length = 142
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 44/111 (39%), Gaps = 42/111 (37%)
Query: 9 SSFSSFRAYLKTVAHTPSRLARR------------------------------------- 31
SF S+ Y K+V TP RL R
Sbjct: 29 ESFKSWENYGKSVMETPYRLKDRLLKRSSDHAELVEIKARSGNEMKKTLNWWDLMWFGIG 88
Query: 32 -----AVSVTTGRAAHDYAGSAFKLSYAIFGLCALLSAFCYTEFVVDMPVA 77
+ V TG A +AG A LS+ I G+ ALLS FCYTEF V++PVA
Sbjct: 89 AVVGSGIFVLTGLEAKQHAGPAVVLSFVISGISALLSVFCYTEFAVEIPVA 139
>Medtr6g034535.1 | cationic amino acid transporter, putative | HC
| chr6:11988244-11986629 | 20130731
Length = 318
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 29/43 (67%)
Query: 36 TTGRAAHDYAGSAFKLSYAIFGLCALLSAFCYTEFVVDMPVAG 78
TTG+ A AG + LSYA G ALLSAF Y EF V++PVAG
Sbjct: 18 TTGQEARSVAGPSIILSYAASGFSALLSAFIYAEFAVEVPVAG 60
>Medtr6g027680.1 | cationic amino acid transporter 2, vacuolar
protein | HC | chr6:9659589-9653338 | 20130731
Length = 575
Score = 46.2 bits (108), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 28/52 (53%)
Query: 32 AVSVTTGRAAHDYAGSAFKLSYAIFGLCALLSAFCYTEFVVDMPVAGGAFSY 83
V V G A ++AG A LS+ + G+ A LSA CY E P AG A+ Y
Sbjct: 67 GVYVLVGTVAREHAGPALPLSFMVAGIAAALSALCYAELASRFPSAGSAYHY 118