Miyakogusa Predicted Gene

Lj6g3v1692390.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1692390.1 tr|F4X4N3|F4X4N3_ACREC BRCA1-A complex subunit
BRE OS=Acromyrmex echinatior GN=G5I_13301 PE=4
SV=1,27.3,2e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
BRE,Brain/reproductive organ-expressed protein,CUFF.59773.1
         (378 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g029040.1 | brain and reproductive organ-expressed protein...   605   e-173
Medtr2g029040.2 | brain and reproductive organ-expressed protein...   512   e-145

>Medtr2g029040.1 | brain and reproductive organ-expressed protein |
           HC | chr2:10818350-10811038 | 20130731
          Length = 383

 Score =  605 bits (1560), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 297/381 (77%), Positives = 324/381 (85%), Gaps = 3/381 (0%)

Query: 1   MAVGAENVPPFIAAQLTHLLSHFPLNLKVEHAWSGDKYNSGAFDRFTLLIPYCLDFIKWD 60
           M  G ENVPPFI AQL+HLLSH  L LK++  WS DKYNSG  DRFTLLIPYCLDFIKWD
Sbjct: 1   MGAGTENVPPFIGAQLSHLLSHSRLTLKIDQLWSSDKYNSGLIDRFTLLIPYCLDFIKWD 60

Query: 61  VIYNVDCPIAAPDVIFGAEDEDFHPFHMLPSG---EGASLPSNCLSDWNYKDPTRLLVLI 117
           +I++ + P  APDVIFG EDE FHPFHM P        +  S+ LSDWNYKDP  LL  I
Sbjct: 61  IIFDAESPNVAPDVIFGPEDEHFHPFHMSPPSVEPNNNNNNSSLLSDWNYKDPKCLLNFI 120

Query: 118 QFLRDQYVLYQRKRVEGVDDERLKFEVSTIVSREGIEMHRSSGFEKSEEVKFAVPLLDMN 177
           QFLRDQYVLYQ KRV  VDD+RLKFE+STIVSREG+EMH  S  +KSEEVKFAVPLLDMN
Sbjct: 121 QFLRDQYVLYQAKRVGEVDDDRLKFEISTIVSREGLEMHMCSFVDKSEEVKFAVPLLDMN 180

Query: 178 INKMVPGCPWRYPQRMHLQVVYPVGRKYLSAPSAPRLKLVSTSELKALFSIDDVKLPPWL 237
           INKMV GCPWR  Q+++LQVVYPVGRKY+SAPSAPRLKLVS+SELKAL+SIDDVKLPPWL
Sbjct: 181 INKMVSGCPWRQSQKIYLQVVYPVGRKYMSAPSAPRLKLVSSSELKALYSIDDVKLPPWL 240

Query: 238 DGMCLAEYLPNLEEYLEKQVLEAVSLIDVRRRFIEALAGPLGRPLEADPVFCRKATFLCT 297
           +GMCLAEYLPNLEEYLEKQVLEAVSLIDVRR+FIEALA  LGRP+EADPVFCRKATFL  
Sbjct: 241 NGMCLAEYLPNLEEYLEKQVLEAVSLIDVRRQFIEALADELGRPVEADPVFCRKATFLSA 300

Query: 298 SGAFTFLAHFLIPTQFPKQQPTIMLQSSQHFNSQTTPIKSRLISDYPWSPRWEPSLMAER 357
           SG  TFL HF+IPTQFPKQQP IMLQSSQHFN+Q  P+KSR +SDYPWSPRWEPSLMAER
Sbjct: 301 SGVLTFLVHFVIPTQFPKQQPVIMLQSSQHFNAQMAPLKSRPMSDYPWSPRWEPSLMAER 360

Query: 358 IGEFLADESLNFKRQCSEGQL 378
           I EFL DE+LNFKRQCSEGQL
Sbjct: 361 IFEFLVDEALNFKRQCSEGQL 381


>Medtr2g029040.2 | brain and reproductive organ-expressed protein |
           HC | chr2:10818318-10811168 | 20130731
          Length = 336

 Score =  512 bits (1318), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 254/329 (77%), Positives = 277/329 (84%), Gaps = 3/329 (0%)

Query: 1   MAVGAENVPPFIAAQLTHLLSHFPLNLKVEHAWSGDKYNSGAFDRFTLLIPYCLDFIKWD 60
           M  G ENVPPFI AQL+HLLSH  L LK++  WS DKYNSG  DRFTLLIPYCLDFIKWD
Sbjct: 1   MGAGTENVPPFIGAQLSHLLSHSRLTLKIDQLWSSDKYNSGLIDRFTLLIPYCLDFIKWD 60

Query: 61  VIYNVDCPIAAPDVIFGAEDEDFHPFHMLPSG---EGASLPSNCLSDWNYKDPTRLLVLI 117
           +I++ + P  APDVIFG EDE FHPFHM P        +  S+ LSDWNYKDP  LL  I
Sbjct: 61  IIFDAESPNVAPDVIFGPEDEHFHPFHMSPPSVEPNNNNNNSSLLSDWNYKDPKCLLNFI 120

Query: 118 QFLRDQYVLYQRKRVEGVDDERLKFEVSTIVSREGIEMHRSSGFEKSEEVKFAVPLLDMN 177
           QFLRDQYVLYQ KRV  VDD+RLKFE+STIVSREG+EMH  S  +KSEEVKFAVPLLDMN
Sbjct: 121 QFLRDQYVLYQAKRVGEVDDDRLKFEISTIVSREGLEMHMCSFVDKSEEVKFAVPLLDMN 180

Query: 178 INKMVPGCPWRYPQRMHLQVVYPVGRKYLSAPSAPRLKLVSTSELKALFSIDDVKLPPWL 237
           INKMV GCPWR  Q+++LQVVYPVGRKY+SAPSAPRLKLVS+SELKAL+SIDDVKLPPWL
Sbjct: 181 INKMVSGCPWRQSQKIYLQVVYPVGRKYMSAPSAPRLKLVSSSELKALYSIDDVKLPPWL 240

Query: 238 DGMCLAEYLPNLEEYLEKQVLEAVSLIDVRRRFIEALAGPLGRPLEADPVFCRKATFLCT 297
           +GMCLAEYLPNLEEYLEKQVLEAVSLIDVRR+FIEALA  LGRP+EADPVFCRKATFL  
Sbjct: 241 NGMCLAEYLPNLEEYLEKQVLEAVSLIDVRRQFIEALADELGRPVEADPVFCRKATFLSA 300

Query: 298 SGAFTFLAHFLIPTQFPKQQPTIMLQSSQ 326
           SG  TFL HF+IPTQFPKQQP IMLQSSQ
Sbjct: 301 SGVLTFLVHFVIPTQFPKQQPVIMLQSSQ 329