Miyakogusa Predicted Gene
- Lj6g3v1690570.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1690570.1 Non Characterized Hit- tr|B9RTM5|B9RTM5_RICCO
Pentatricopeptide repeat-containing protein, putative
,29.02,7e-19,seg,NULL; PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL;
F,gene.g66515.t1.1
(281 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g060630.1 | PPR containing plant-like protein | HC | chr2:... 298 5e-81
Medtr7g075210.1 | PPR superfamily protein | LC | chr7:28087993-2... 240 1e-63
Medtr2g078690.1 | PPR containing plant-like protein | HC | chr2:... 201 6e-52
Medtr7g085100.1 | PPR containing plant-like protein | HC | chr7:... 123 2e-28
Medtr1g079860.1 | hypothetical protein | LC | chr1:35480380-3547... 107 1e-23
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:... 106 2e-23
Medtr3g088505.3 | PPR containing plant-like protein | HC | chr3:... 100 1e-21
Medtr3g088505.1 | PPR containing plant-like protein | HC | chr3:... 100 1e-21
Medtr3g088505.2 | PPR containing plant-like protein | HC | chr3:... 100 1e-21
Medtr3g088505.4 | PPR containing plant-like protein | HC | chr3:... 100 1e-21
Medtr2g016740.1 | PPR containing plant-like protein | HC | chr2:... 99 5e-21
Medtr7g029515.1 | PPR containing plant protein | HC | chr7:10579... 94 1e-19
Medtr1g108270.1 | PPR containing plant-like protein | HC | chr1:... 94 1e-19
Medtr1g056160.3 | PPR containing plant protein | HC | chr1:24576... 91 1e-18
Medtr1g056160.8 | PPR containing plant protein | HC | chr1:24576... 91 1e-18
Medtr1g056160.5 | PPR containing plant protein | HC | chr1:24576... 91 1e-18
Medtr1g056160.4 | PPR containing plant protein | HC | chr1:24576... 91 1e-18
Medtr1g056160.6 | PPR containing plant protein | HC | chr1:24576... 91 1e-18
Medtr1g056160.7 | PPR containing plant protein | HC | chr1:24576... 91 1e-18
Medtr1g056160.2 | PPR containing plant protein | HC | chr1:24576... 91 1e-18
Medtr1g056160.1 | PPR containing plant protein | HC | chr1:24577... 91 1e-18
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:... 91 1e-18
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 82 5e-16
Medtr8g098955.1 | PPR containing plant-like protein | HC | chr8:... 82 7e-16
Medtr2g104640.1 | PPR containing plant-like protein | HC | chr2:... 80 3e-15
Medtr2g100200.2 | PPR containing plant-like protein | HC | chr2:... 75 7e-14
Medtr2g100200.1 | PPR containing plant-like protein | HC | chr2:... 75 7e-14
Medtr6g075180.1 | PPR containing plant-like protein | HC | chr6:... 72 6e-13
Medtr3g078580.1 | PPR containing plant-like protein | HC | chr3:... 70 2e-12
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 68 9e-12
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 2e-11
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 65 6e-11
Medtr4g094245.2 | PPR containing plant-like protein | HC | chr4:... 65 6e-11
Medtr4g094245.1 | PPR containing plant-like protein | HC | chr4:... 65 6e-11
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 64 1e-10
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 2e-10
Medtr3g008430.2 | PPR containing plant-like protein | HC | chr3:... 63 3e-10
Medtr3g008430.1 | PPR containing plant-like protein | HC | chr3:... 63 3e-10
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 63 4e-10
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 62 4e-10
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 62 5e-10
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 62 8e-10
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 8e-10
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 62 8e-10
Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 61 1e-09
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 61 1e-09
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 61 2e-09
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 60 2e-09
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 60 2e-09
Medtr8g072150.1 | PPR containing plant-like protein | HC | chr8:... 60 3e-09
Medtr8g102710.1 | PPR containing plant-like protein | HC | chr8:... 60 3e-09
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 3e-09
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 59 4e-09
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 5e-09
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 59 5e-09
Medtr1g011520.1 | PPR containing plant-like protein | HC | chr1:... 59 7e-09
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 59 7e-09
Medtr7g118240.1 | PPR containing plant-like protein | HC | chr7:... 58 8e-09
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 58 8e-09
Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 8e-09
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 9e-09
Medtr5g044120.1 | PPR containing plant-like protein | HC | chr5:... 58 1e-08
Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC | ... 58 1e-08
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 1e-08
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 57 1e-08
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 57 1e-08
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 57 1e-08
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 57 2e-08
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 57 2e-08
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 57 2e-08
Medtr5g048070.1 | PPR containing plant-like protein | HC | chr5:... 57 2e-08
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 57 2e-08
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 2e-08
Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 2e-08
Medtr1g086500.1 | PPR containing plant-like protein | HC | chr1:... 57 3e-08
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 57 3e-08
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 56 3e-08
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 4e-08
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 56 4e-08
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 4e-08
Medtr3g067670.1 | PPR containing plant-like protein | HC | chr3:... 56 5e-08
Medtr3g067670.2 | PPR containing plant-like protein | HC | chr3:... 56 5e-08
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 55 6e-08
Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 55 6e-08
Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 55 7e-08
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 55 7e-08
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 55 7e-08
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 8e-08
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 8e-08
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 55 8e-08
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 55 8e-08
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 8e-08
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 55 8e-08
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 9e-08
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 9e-08
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 55 1e-07
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 55 1e-07
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 55 1e-07
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 55 1e-07
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 1e-07
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 54 1e-07
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 54 1e-07
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 1e-07
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 1e-07
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 2e-07
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 2e-07
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 54 2e-07
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 2e-07
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 54 2e-07
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 54 2e-07
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 2e-07
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 53 2e-07
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 53 3e-07
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 53 3e-07
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 53 3e-07
Medtr7g060720.1 | PPR containing plant-like protein, putative | ... 53 4e-07
Medtr6g005000.1 | PPR containing plant-like protein | HC | chr6:... 53 4e-07
Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 4e-07
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 5e-07
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 52 5e-07
Medtr7g011520.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 5e-07
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 5e-07
Medtr7g070420.1 | PPR containing plant-like protein | HC | chr7:... 52 5e-07
Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 5e-07
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 52 6e-07
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 6e-07
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 52 6e-07
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 52 6e-07
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 52 6e-07
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 52 7e-07
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 52 7e-07
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 52 7e-07
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 52 7e-07
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 52 7e-07
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 52 7e-07
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 7e-07
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 9e-07
Medtr7g075010.1 | PPR containing plant-like protein | HC | chr7:... 51 1e-06
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 51 1e-06
Medtr4g068800.1 | PPR containing plant-like protein | HC | chr4:... 51 1e-06
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 51 1e-06
Medtr4g068800.4 | PPR containing plant-like protein | HC | chr4:... 51 1e-06
Medtr4g068800.3 | PPR containing plant-like protein | HC | chr4:... 51 1e-06
Medtr4g068800.5 | PPR containing plant-like protein | HC | chr4:... 51 1e-06
Medtr4g068800.2 | PPR containing plant-like protein | HC | chr4:... 51 1e-06
Medtr8g102650.1 | PPR containing plant-like protein | HC | chr8:... 51 1e-06
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 51 1e-06
Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 2e-06
Medtr8g080940.1 | PPR containing plant-like protein | HC | chr8:... 50 2e-06
Medtr8g080940.2 | PPR containing plant-like protein | HC | chr8:... 50 2e-06
Medtr1g055295.1 | PPR containing plant-like protein | HC | chr1:... 50 2e-06
Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 2e-06
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 50 2e-06
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 50 2e-06
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 50 2e-06
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 50 2e-06
Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 2e-06
Medtr3g083680.1 | PPR containing plant-like protein | HC | chr3:... 50 3e-06
Medtr0026s0200.1 | PPR containing plant-like protein | HC | scaf... 50 3e-06
Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 3e-06
Medtr8g107230.1 | PPR containing plant-like protein | HC | chr8:... 50 3e-06
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 50 3e-06
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:... 49 4e-06
Medtr6g080130.1 | pentatricopeptide (PPR) repeat protein | LC | ... 49 4e-06
Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC | ... 49 5e-06
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:... 49 5e-06
Medtr4g133740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 6e-06
Medtr3g094280.1 | pentatricopeptide (PPR) repeat protein | LC | ... 49 6e-06
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 49 6e-06
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 49 7e-06
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 49 7e-06
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 49 7e-06
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 7e-06
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 48 9e-06
>Medtr2g060630.1 | PPR containing plant-like protein | HC |
chr2:25711944-25710341 | 20130731
Length = 497
Score = 298 bits (762), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 144/237 (60%), Positives = 175/237 (73%), Gaps = 11/237 (4%)
Query: 18 FPLNPNPVKSIPPPLFTRRFLHSQPEHAAGAGAFVQNLLKFRRDKPTDQVERALDLCGFX 77
FP NP S RFLHS + A +F+QNLLKFRRDKPT+Q+E+AL+L G
Sbjct: 44 FPQNPRNSSS--------RFLHSHHDSPPLA-SFIQNLLKFRRDKPTEQIEQALNLIGIH 94
Query: 78 XXXXXXXXXXRRHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVF 137
+RHRSDWKPA +FF W SK ++Y P+ V NEI++ILGKM FEELHQV
Sbjct: 95 PNNNLVLQVLQRHRSDWKPAFIFFKWVSKTNNYTPSCEVYNEIINILGKMKCFEELHQVL 154
Query: 138 DEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLD--AFRTLLMWLC 195
DEMS R+ +NE+TF L+RRF AAHK+EEAI++FY RE+FGLD +LD AFRTLLMW+C
Sbjct: 155 DEMSQRKEFINEETFCILIRRFVAAHKLEEAINIFYRREEFGLDNELDSKAFRTLLMWMC 214
Query: 196 RYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCR 252
RYKH+E+AETLFH +F+ RDIKTWNVILNGWCVLGN HEAKR+WKDI+A KC+
Sbjct: 215 RYKHIEEAETLFHRNLNKFRFCRDIKTWNVILNGWCVLGNTHEAKRLWKDIIAYKCK 271
>Medtr7g075210.1 | PPR superfamily protein | LC |
chr7:28087993-28086890 | 20130731
Length = 280
Score = 240 bits (612), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 136/191 (71%), Gaps = 20/191 (10%)
Query: 58 FRRDKPTDQVERALDLCGFXXXXXXXXXXXRRHRSDWKPALVFFNWASKADSYAPTSRVC 117
FRRDKPT+Q+ERAL+L G +RHRSDWKPA +FF W +K ++Y P+ V
Sbjct: 94 FRRDKPTEQIERALNLTGIHPDSNLVLELLQRHRSDWKPAFIFFKWVTKTNNYTPSCEVY 153
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
NEI++ILGKM RFEELHQV DEM F AAHKVEE I++F+ RE+
Sbjct: 154 NEIINILGKMKRFEELHQVLDEM------------------FVAAHKVEELINIFHIREE 195
Query: 178 FGLDLDLDA--FRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGN 235
FGLD +LD+ FRTLLMW+CRYKH+E+AETLFH +F RDIKTWNVILNGWCVLGN
Sbjct: 196 FGLDNELDSETFRTLLMWMCRYKHIEEAETLFHRNLNKFGFCRDIKTWNVILNGWCVLGN 255
Query: 236 AHEAKRVWKDI 246
HEAKR+WKDI
Sbjct: 256 THEAKRLWKDI 266
>Medtr2g078690.1 | PPR containing plant-like protein | HC |
chr2:32882427-32884704 | 20130731
Length = 331
Score = 201 bits (512), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 92/130 (70%), Positives = 108/130 (83%), Gaps = 2/130 (1%)
Query: 127 MSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLD--LDL 184
M FEELHQV DEMS R+ +NE+TF L+RRF AAHK+EEAI++FY RE+FGLD LD
Sbjct: 1 MKCFEELHQVLDEMSQRKEFINEETFYILIRRFVAAHKIEEAINIFYRREEFGLDNELDS 60
Query: 185 DAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWK 244
+AFRTLLMW+CRYKH+E+AETLFH +F RDIKTWNVILNGWCVLGN HEAKR+WK
Sbjct: 61 EAFRTLLMWMCRYKHIEEAETLFHRNLNKFGFCRDIKTWNVILNGWCVLGNTHEAKRLWK 120
Query: 245 DIMASKCRPD 254
DI+A KC+PD
Sbjct: 121 DIIAYKCKPD 130
>Medtr7g085100.1 | PPR containing plant-like protein | HC |
chr7:32903829-32906178 | 20130731
Length = 585
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 8/207 (3%)
Query: 66 QVERALDLCGFXXXXXXXXXXXRRHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILG 125
++++ L+ C R R+DW+ A FF WA K Y + R + ++ +LG
Sbjct: 117 EIKQKLEDCNVKASSELVVEVLSRVRNDWEAAFTFFLWAGKQPGYDHSVREYHSMISVLG 176
Query: 126 KMSRFEELHQVFDEM---SHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDL 182
KM RF+ + +EM E +V T ++R++ A H V AI+ FY ++F +
Sbjct: 177 KMRRFDTAWALVEEMRRGKTGESIVTPQTLLIMIRKYCAVHDVGRAINTFYAFKRFNFQV 236
Query: 183 DLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC-VLGNAHEAKR 241
L F+ LL LCRYK+V+DAE L F L D K++N+ILNGWC ++ +A A+R
Sbjct: 237 GLYEFQGLLSALCRYKNVQDAEHLLFCNKNVFPL--DTKSFNIILNGWCNLIVSARNAER 294
Query: 242 VWKDIMASKCRPDPRKGNWAPLLSCFA 268
+W+++ SK R ++A ++SC++
Sbjct: 295 IWEEM--SKRRIQHDVVSYASIISCYS 319
>Medtr1g079860.1 | hypothetical protein | LC |
chr1:35480380-35479050 | 20130731
Length = 159
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 60/73 (82%), Gaps = 2/73 (2%)
Query: 127 MSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLD--LDL 184
M FEELHQV DEMS R+ +NE+TFS L+RRF AAHKVEEAI++FY RE+FGLD LD
Sbjct: 1 MKHFEELHQVLDEMSQRKEFINEETFSILIRRFVAAHKVEEAINIFYRREEFGLDNELDS 60
Query: 185 DAFRTLLMWLCRY 197
+AFRTLLMW+C +
Sbjct: 61 EAFRTLLMWMCSF 73
>Medtr5g006640.1 | PPR containing plant-like protein | HC |
chr5:1017001-1018791 | 20130731
Length = 553
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 103/205 (50%), Gaps = 6/205 (2%)
Query: 52 VQNLLKFRRDKPTDQVERALDLCGFXXXXXXXXXXXRRHRSDWKPALVFFNWASKADSYA 111
+ LK +R D V +ALD GF +R +DW A FF WA K Y
Sbjct: 106 ISTFLKEQRHSSHDHVVQALDGSGFRVSNSLVMQVLKRFGNDWVAAYGFFIWAKKQTPYV 165
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
+ V N ++DILGK F+ + ++ EM EG V DT S ++RRFA A + E+A+
Sbjct: 166 HSPEVYNLMVDILGKAKEFDLMWKLVKEMKRIEGYVCLDTMSKVMRRFAKAQRHEDAVEA 225
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIK--TWNVILNG 229
F ++G++ D A LL L + + +E A H+ EF+ + ++N+++NG
Sbjct: 226 FRGMGKYGVEKDTAALNKLLDALVKGQSIEIA----HNVLDEFKSSVPLSSPSFNILING 281
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPD 254
WC + N +A++V ++ PD
Sbjct: 282 WCKVRNFEKARKVMEERKEHGFEPD 306
>Medtr3g088505.3 | PPR containing plant-like protein | HC |
chr3:40228600-40232128 | 20130731
Length = 480
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 113/219 (51%), Gaps = 3/219 (1%)
Query: 51 FVQNLLKFRRDKPTDQVERALDLCGFXXXXXXXXXXXRRHRSDWKPALVFFNWASKADSY 110
+ + K P ++ AL+ G +R + A FF WA K +Y
Sbjct: 34 LTETVSKVMMSSPAITLDTALNQSGVRVSPELVETVLKRFENAGMSAFRFFEWAEKQRNY 93
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
+ + R + +++ L K+ +++ + ++ + M ++G+VN +TF ++R++A AHKV+EA+
Sbjct: 94 SHSIRAYHLMIESLAKIRQYQIMWELVNSM-RKKGMVNVETFCIIMRKYARAHKVDEAVY 152
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
F +++ +L AF LL LC+ ++V A+ +F S F+ D KT++++L GW
Sbjct: 153 TFNVMDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE--PDSKTYSILLEGW 210
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCFAG 269
N +A+ V+ +++++ C PD + C AG
Sbjct: 211 GKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCKAG 249
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
++DIL K R +E +V EM + +S L+ + ++E+AI MF E+ G
Sbjct: 241 MVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNG 300
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQ---LHRDIKTWNVILNGWCVLGNA 236
+ D+ + L+ C+ +++ H +E + + + +T NVI++ G
Sbjct: 301 IAADVVVYNALIGAFCKANKLKNV----HRVLKEMESNGIAPNSRTCNVIMSSLISQGET 356
Query: 237 HEAKRVWKDIMASKCRPD 254
+A V++ M C PD
Sbjct: 357 DKAFSVFRR-MIKLCEPD 373
>Medtr3g088505.1 | PPR containing plant-like protein | HC |
chr3:40228600-40232138 | 20130731
Length = 480
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 113/219 (51%), Gaps = 3/219 (1%)
Query: 51 FVQNLLKFRRDKPTDQVERALDLCGFXXXXXXXXXXXRRHRSDWKPALVFFNWASKADSY 110
+ + K P ++ AL+ G +R + A FF WA K +Y
Sbjct: 34 LTETVSKVMMSSPAITLDTALNQSGVRVSPELVETVLKRFENAGMSAFRFFEWAEKQRNY 93
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
+ + R + +++ L K+ +++ + ++ + M ++G+VN +TF ++R++A AHKV+EA+
Sbjct: 94 SHSIRAYHLMIESLAKIRQYQIMWELVNSM-RKKGMVNVETFCIIMRKYARAHKVDEAVY 152
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
F +++ +L AF LL LC+ ++V A+ +F S F+ D KT++++L GW
Sbjct: 153 TFNVMDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE--PDSKTYSILLEGW 210
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCFAG 269
N +A+ V+ +++++ C PD + C AG
Sbjct: 211 GKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCKAG 249
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
++DIL K R +E +V EM + +S L+ + ++E+AI MF E+ G
Sbjct: 241 MVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNG 300
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQ---LHRDIKTWNVILNGWCVLGNA 236
+ D+ + L+ C+ +++ H +E + + + +T NVI++ G
Sbjct: 301 IAADVVVYNALIGAFCKANKLKNV----HRVLKEMESNGIAPNSRTCNVIMSSLISQGET 356
Query: 237 HEAKRVWKDIMASKCRPD 254
+A V++ M C PD
Sbjct: 357 DKAFSVFRR-MIKLCEPD 373
>Medtr3g088505.2 | PPR containing plant-like protein | HC |
chr3:40228600-40232140 | 20130731
Length = 480
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 113/219 (51%), Gaps = 3/219 (1%)
Query: 51 FVQNLLKFRRDKPTDQVERALDLCGFXXXXXXXXXXXRRHRSDWKPALVFFNWASKADSY 110
+ + K P ++ AL+ G +R + A FF WA K +Y
Sbjct: 34 LTETVSKVMMSSPAITLDTALNQSGVRVSPELVETVLKRFENAGMSAFRFFEWAEKQRNY 93
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
+ + R + +++ L K+ +++ + ++ + M ++G+VN +TF ++R++A AHKV+EA+
Sbjct: 94 SHSIRAYHLMIESLAKIRQYQIMWELVNSM-RKKGMVNVETFCIIMRKYARAHKVDEAVY 152
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
F +++ +L AF LL LC+ ++V A+ +F S F+ D KT++++L GW
Sbjct: 153 TFNVMDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE--PDSKTYSILLEGW 210
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCFAG 269
N +A+ V+ +++++ C PD + C AG
Sbjct: 211 GKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCKAG 249
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
++DIL K R +E +V EM + +S L+ + ++E+AI MF E+ G
Sbjct: 241 MVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNG 300
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQ---LHRDIKTWNVILNGWCVLGNA 236
+ D+ + L+ C+ +++ H +E + + + +T NVI++ G
Sbjct: 301 IAADVVVYNALIGAFCKANKLKNV----HRVLKEMESNGIAPNSRTCNVIMSSLISQGET 356
Query: 237 HEAKRVWKDIMASKCRPD 254
+A V++ M C PD
Sbjct: 357 DKAFSVFRR-MIKLCEPD 373
>Medtr3g088505.4 | PPR containing plant-like protein | HC |
chr3:40228600-40233968 | 20130731
Length = 480
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 113/219 (51%), Gaps = 3/219 (1%)
Query: 51 FVQNLLKFRRDKPTDQVERALDLCGFXXXXXXXXXXXRRHRSDWKPALVFFNWASKADSY 110
+ + K P ++ AL+ G +R + A FF WA K +Y
Sbjct: 34 LTETVSKVMMSSPAITLDTALNQSGVRVSPELVETVLKRFENAGMSAFRFFEWAEKQRNY 93
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
+ + R + +++ L K+ +++ + ++ + M ++G+VN +TF ++R++A AHKV+EA+
Sbjct: 94 SHSIRAYHLMIESLAKIRQYQIMWELVNSM-RKKGMVNVETFCIIMRKYARAHKVDEAVY 152
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
F +++ +L AF LL LC+ ++V A+ +F S F+ D KT++++L GW
Sbjct: 153 TFNVMDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE--PDSKTYSILLEGW 210
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCFAG 269
N +A+ V+ +++++ C PD + C AG
Sbjct: 211 GKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCKAG 249
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
++DIL K R +E +V EM + +S L+ + ++E+AI MF E+ G
Sbjct: 241 MVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNG 300
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQ---LHRDIKTWNVILNGWCVLGNA 236
+ D+ + L+ C+ +++ H +E + + + +T NVI++ G
Sbjct: 301 IAADVVVYNALIGAFCKANKLKNV----HRVLKEMESNGIAPNSRTCNVIMSSLISQGET 356
Query: 237 HEAKRVWKDIMASKCRPD 254
+A V++ M C PD
Sbjct: 357 DKAFSVFRR-MIKLCEPD 373
>Medtr2g016740.1 | PPR containing plant-like protein | HC |
chr2:5175787-5177502 | 20130731
Length = 489
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 96/189 (50%), Gaps = 3/189 (1%)
Query: 66 QVERALDLCGFXXXXXXXXXXXRRHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILG 125
+E LD CG R + KPA FF W K + SR N ++DILG
Sbjct: 34 NMEAVLDECGVVLSHDLVVDVLHRFKHARKPAFRFFCWVGKRRDFEHDSRTYNTMMDILG 93
Query: 126 KMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLD 185
K +FE + + +EM + G + DTFS ++ FA+A + ++A+ +F +++ + +
Sbjct: 94 KTRQFETMVALLEEMGEK-GFLTMDTFSIAIKAFASAKERKKAVGVFDLMKKYKFKVGVH 152
Query: 186 AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD 245
+ LL L K V++AE ++ F +++T+ ++LNGWC + N EA RVW +
Sbjct: 153 SVNFLLDSLGATKLVKEAEVVYEKLRDRFV--PNLQTYTILLNGWCRVRNLLEAGRVWNE 210
Query: 246 IMASKCRPD 254
++ PD
Sbjct: 211 MIDKGFNPD 219
>Medtr7g029515.1 | PPR containing plant protein | HC |
chr7:10579080-10580534 | 20130731
Length = 484
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 100/179 (55%), Gaps = 5/179 (2%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R++ DWK AL F WAS ++ + + + ++DILG+M +++ ++ +EM +E L+
Sbjct: 78 RYKDDWKSALAIFRWASSHSNFKHSQQSYDMMVDILGRMKAMDKMREILEEM-RQESLIT 136
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
DT + ++RRF A + ++A+ +F + GL+ + ++ LL LC+ K VE A ++
Sbjct: 137 LDTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYL 196
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCF 267
+ + + T+N++++GWC + EA +++ CRP +++ ++ C+
Sbjct: 197 E--LKHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVI--SYSTIIQCY 251
>Medtr1g108270.1 | PPR containing plant-like protein | HC |
chr1:48926827-48924799 | 20130731
Length = 509
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 90/159 (56%), Gaps = 3/159 (1%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
AL FF WA K + + + + +++ LGK+ +F+ + + DEM R+ L+N DTFS +
Sbjct: 105 ALSFFRWAEKQQGFNHNTEIFHALIEALGKIRQFKMIWNLVDEMKQRK-LLNGDTFSLIA 163
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYK-HVEDAETLFHSKAREFQ 215
RR+ A ++EA+ F E++GL + F L+ LC+ K HVE A+ LF K R++
Sbjct: 164 RRYVRAKVIKEALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELF-DKMRQWN 222
Query: 216 LHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
L ++K++ +++ GW N + V +++ +PD
Sbjct: 223 LEPNLKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPD 261
>Medtr1g056160.3 | PPR containing plant protein | HC |
chr1:24576326-24582031 | 20130731
Length = 501
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 99/179 (55%), Gaps = 5/179 (2%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R++ DWK AL F WA ++ + + + ++DILG+M +++ ++ +EM +E L+
Sbjct: 95 RYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMREILEEM-RQESLIT 153
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
+T + ++RRF A + ++A+ +F + GL+ + ++ LL LC+ K VE A ++
Sbjct: 154 LNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYL 213
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCF 267
+ + + T+N++++GWC + EA +++ CRP +++ ++ C+
Sbjct: 214 E--LKHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCV--ISYSTIIQCY 268
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
I+ + F+ ++ + DEM + N T++T++ A A K EEA+ + G
Sbjct: 264 IIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVG 323
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEA 239
D F +L+ L R ++DA +F + + + T+N +++ +C A
Sbjct: 324 CRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERA 383
Query: 240 KRVWKDIMASK-CRPDPRKGNWAPLL-SCF 267
+ K++ S C+PD + + PL+ SCF
Sbjct: 384 FGILKEMEKSGLCKPDIQ--TYHPLIKSCF 411
>Medtr1g056160.8 | PPR containing plant protein | HC |
chr1:24576341-24582031 | 20130731
Length = 501
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 99/179 (55%), Gaps = 5/179 (2%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R++ DWK AL F WA ++ + + + ++DILG+M +++ ++ +EM +E L+
Sbjct: 95 RYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMREILEEM-RQESLIT 153
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
+T + ++RRF A + ++A+ +F + GL+ + ++ LL LC+ K VE A ++
Sbjct: 154 LNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYL 213
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCF 267
+ + + T+N++++GWC + EA +++ CRP +++ ++ C+
Sbjct: 214 E--LKHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCV--ISYSTIIQCY 268
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
I+ + F+ ++ + DEM + N T++T++ A A K EEA+ + G
Sbjct: 264 IIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVG 323
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEA 239
D F +L+ L R ++DA +F + + + T+N +++ +C A
Sbjct: 324 CRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERA 383
Query: 240 KRVWKDIMASK-CRPDPRKGNWAPLL-SCF 267
+ K++ S C+PD + + PL+ SCF
Sbjct: 384 FGILKEMEKSGLCKPDIQ--TYHPLIKSCF 411
>Medtr1g056160.5 | PPR containing plant protein | HC |
chr1:24576341-24581268 | 20130731
Length = 501
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 99/179 (55%), Gaps = 5/179 (2%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R++ DWK AL F WA ++ + + + ++DILG+M +++ ++ +EM +E L+
Sbjct: 95 RYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMREILEEM-RQESLIT 153
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
+T + ++RRF A + ++A+ +F + GL+ + ++ LL LC+ K VE A ++
Sbjct: 154 LNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYL 213
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCF 267
+ + + T+N++++GWC + EA +++ CRP +++ ++ C+
Sbjct: 214 E--LKHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCV--ISYSTIIQCY 268
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
I+ + F+ ++ + DEM + N T++T++ A A K EEA+ + G
Sbjct: 264 IIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVG 323
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEA 239
D F +L+ L R ++DA +F + + + T+N +++ +C A
Sbjct: 324 CRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERA 383
Query: 240 KRVWKDIMASK-CRPDPRKGNWAPLL-SCF 267
+ K++ S C+PD + + PL+ SCF
Sbjct: 384 FGILKEMEKSGLCKPDIQ--TYHPLIKSCF 411
>Medtr1g056160.4 | PPR containing plant protein | HC |
chr1:24576341-24581268 | 20130731
Length = 501
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 99/179 (55%), Gaps = 5/179 (2%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R++ DWK AL F WA ++ + + + ++DILG+M +++ ++ +EM +E L+
Sbjct: 95 RYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMREILEEM-RQESLIT 153
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
+T + ++RRF A + ++A+ +F + GL+ + ++ LL LC+ K VE A ++
Sbjct: 154 LNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYL 213
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCF 267
+ + + T+N++++GWC + EA +++ CRP +++ ++ C+
Sbjct: 214 E--LKHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCV--ISYSTIIQCY 268
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
I+ + F+ ++ + DEM + N T++T++ A A K EEA+ + G
Sbjct: 264 IIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVG 323
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEA 239
D F +L+ L R ++DA +F + + + T+N +++ +C A
Sbjct: 324 CRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERA 383
Query: 240 KRVWKDIMASK-CRPDPRKGNWAPLL-SCF 267
+ K++ S C+PD + + PL+ SCF
Sbjct: 384 FGILKEMEKSGLCKPDIQ--TYHPLIKSCF 411
>Medtr1g056160.6 | PPR containing plant protein | HC |
chr1:24576326-24581268 | 20130731
Length = 501
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 99/179 (55%), Gaps = 5/179 (2%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R++ DWK AL F WA ++ + + + ++DILG+M +++ ++ +EM +E L+
Sbjct: 95 RYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMREILEEM-RQESLIT 153
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
+T + ++RRF A + ++A+ +F + GL+ + ++ LL LC+ K VE A ++
Sbjct: 154 LNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYL 213
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCF 267
+ + + T+N++++GWC + EA +++ CRP +++ ++ C+
Sbjct: 214 E--LKHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCV--ISYSTIIQCY 268
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
I+ + F+ ++ + DEM + N T++T++ A A K EEA+ + G
Sbjct: 264 IIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVG 323
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEA 239
D F +L+ L R ++DA +F + + + T+N +++ +C A
Sbjct: 324 CRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERA 383
Query: 240 KRVWKDIMASK-CRPDPRKGNWAPLL-SCF 267
+ K++ S C+PD + + PL+ SCF
Sbjct: 384 FGILKEMEKSGLCKPDIQ--TYHPLIKSCF 411
>Medtr1g056160.7 | PPR containing plant protein | HC |
chr1:24576340-24582031 | 20130731
Length = 501
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 99/179 (55%), Gaps = 5/179 (2%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R++ DWK AL F WA ++ + + + ++DILG+M +++ ++ +EM +E L+
Sbjct: 95 RYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMREILEEM-RQESLIT 153
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
+T + ++RRF A + ++A+ +F + GL+ + ++ LL LC+ K VE A ++
Sbjct: 154 LNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYL 213
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCF 267
+ + + T+N++++GWC + EA +++ CRP +++ ++ C+
Sbjct: 214 E--LKHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCV--ISYSTIIQCY 268
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
I+ + F+ ++ + DEM + N T++T++ A A K EEA+ + G
Sbjct: 264 IIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVG 323
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEA 239
D F +L+ L R ++DA +F + + + T+N +++ +C A
Sbjct: 324 CRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERA 383
Query: 240 KRVWKDIMASK-CRPDPRKGNWAPLL-SCF 267
+ K++ S C+PD + + PL+ SCF
Sbjct: 384 FGILKEMEKSGLCKPDIQ--TYHPLIKSCF 411
>Medtr1g056160.2 | PPR containing plant protein | HC |
chr1:24576341-24582024 | 20130731
Length = 501
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 99/179 (55%), Gaps = 5/179 (2%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R++ DWK AL F WA ++ + + + ++DILG+M +++ ++ +EM +E L+
Sbjct: 95 RYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMREILEEM-RQESLIT 153
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
+T + ++RRF A + ++A+ +F + GL+ + ++ LL LC+ K VE A ++
Sbjct: 154 LNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYL 213
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCF 267
+ + + T+N++++GWC + EA +++ CRP +++ ++ C+
Sbjct: 214 E--LKHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCV--ISYSTIIQCY 268
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
I+ + F+ ++ + DEM + N T++T++ A A K EEA+ + G
Sbjct: 264 IIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVG 323
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEA 239
D F +L+ L R ++DA +F + + + T+N +++ +C A
Sbjct: 324 CRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERA 383
Query: 240 KRVWKDIMASK-CRPDPRKGNWAPLL-SCF 267
+ K++ S C+PD + + PL+ SCF
Sbjct: 384 FGILKEMEKSGLCKPDIQ--TYHPLIKSCF 411
>Medtr1g056160.1 | PPR containing plant protein | HC |
chr1:24577487-24578941 | 20130731
Length = 484
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 99/179 (55%), Gaps = 5/179 (2%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R++ DWK AL F WA ++ + + + ++DILG+M +++ ++ +EM +E L+
Sbjct: 78 RYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMREILEEM-RQESLIT 136
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
+T + ++RRF A + ++A+ +F + GL+ + ++ LL LC+ K VE A ++
Sbjct: 137 LNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYL 196
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCF 267
+ + + T+N++++GWC + EA +++ CRP +++ ++ C+
Sbjct: 197 E--LKHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVI--SYSTIIQCY 251
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
I+ + F+ ++ + DEM + N T++T++ A A K EEA+ + G
Sbjct: 247 IIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVG 306
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEA 239
D F +L+ L R ++DA +F + + + T+N +++ +C A
Sbjct: 307 CRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERA 366
Query: 240 KRVWKDIMASK-CRPDPRKGNWAPLL-SCF 267
+ K++ S C+PD + + PL+ SCF
Sbjct: 367 FGILKEMEKSGLCKPDIQ--TYHPLIKSCF 394
>Medtr3g114700.1 | PPR containing plant-like protein | HC |
chr3:53562677-53565345 | 20130731
Length = 530
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 91/183 (49%), Gaps = 4/183 (2%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
RH + +L FFNWA+ + + + NE++D+ GK+ F+ + D M R +
Sbjct: 118 RHGIPFLQSLAFFNWATTLEGFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRIT 177
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
TFS L+RR+ A EA+ F E +G D +F ++ LC+ + +AE F
Sbjct: 178 VSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFD 237
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCFA 268
S +F+ D+ + +++GWC G+ +A+ V+ D+ + +P+ ++ ++
Sbjct: 238 SLKHKFE--PDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVY--TYSIVIDSLC 293
Query: 269 GCG 271
CG
Sbjct: 294 RCG 296
>Medtr8g071300.1 | PPR containing plant-like protein | HC |
chr8:30270840-30266726 | 20130731
Length = 647
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 3/159 (1%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMS-HREGLVNEDTFSTL 155
A FF+WASK SY + V ++ +L KM +F + + DEM L++ F L
Sbjct: 131 AYRFFSWASKQTSYRHSQEVYKAMIKVLSKMRQFGAVWGLIDEMRVENSELISPQVFVIL 190
Query: 156 LRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQ 215
+RRFA+A V +AI + ++G ++D F LL LC+ V++A +LF ++
Sbjct: 191 MRRFASARMVSKAIEVLDEMPKYGCEVDEYVFGCLLDALCKNGSVKEAASLFED--MRYK 248
Query: 216 LHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+K + +L GWC G EAK V + + PD
Sbjct: 249 FTPTVKHFTSLLYGWCKEGKLVEAKHVLVQMKDAGIEPD 287
>Medtr8g098955.1 | PPR containing plant-like protein | HC |
chr8:41474408-41477159 | 20130731
Length = 498
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED 150
R D KPAL FN + +VCN ++ +LG +F + +M L
Sbjct: 104 RDDLKPALRAFNLGYNDE------KVCNLMIWVLGTHDKFHTAWSIVRDM-RSSSLSTHQ 156
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
++ R+A A+ +AI F L D +AFR LL LC+Y +VE+AE
Sbjct: 157 AMLIIIDRYAYANNAAKAIETFNFMNNSRLTPDQEAFRALLTSLCKYGNVEEAEEYMLVN 216
Query: 211 AREFQLHRDIKTWNVILNGWC-VLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCFAG 269
+ F L + + +N+ILNGWC + + +EAKRVW+D++ PD +++ ++SCF+
Sbjct: 217 KKLFPL--ETENFNIILNGWCNITTDVYEAKRVWRDMLKYCITPDA--TSYSHMISCFSK 272
Query: 270 CG 271
G
Sbjct: 273 EG 274
>Medtr2g104640.1 | PPR containing plant-like protein | HC |
chr2:45047143-45044400 | 20130731
Length = 487
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 15/169 (8%)
Query: 92 SDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHR-EGLVNED 150
+D+K AL FFNW + ++ N +LDILGK F++ + M L N
Sbjct: 88 NDYKRALEFFNWVETKFKFQHSTETYNLVLDILGKFFEFQQCWNLIHRMRQNPHSLPNHT 147
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
TF + +R+ +AH V++A++ F +F L D +F L+ LC YKHV +A+ L
Sbjct: 148 TFRVMFKRYVSAHCVQDAVNTFQRLNEFNLK-DETSFSNLIDALCEYKHVLEAQDLVFGD 206
Query: 211 AREFQL-------------HRDIKTWNVILNGWCVLGNAHEAKRVWKDI 246
+ L ++ K +N++L GW LG + W ++
Sbjct: 207 KKNQTLTWIVDGVDGFVASSKNTKIFNIVLRGWYKLGWWSKCWEFWDEM 255
>Medtr2g100200.2 | PPR containing plant-like protein | HC |
chr2:43021668-43019551 | 20130731
Length = 527
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 2/157 (1%)
Query: 98 LVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLR 157
++FFNWA K + I+ LG+ F + QV DEM + S ++
Sbjct: 120 VMFFNWALKQPMVPRDVGSYHVIVKALGRRKFFVFMMQVLDEMRLNGIKADLLMLSIVID 179
Query: 158 RFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLH 217
F A V +AI +F + GL D + LL LCR HV A ++F+S + +
Sbjct: 180 SFVNAGHVSKAIQLFGNLDDLGLCRDTEVLNVLLSCLCRRCHVGAAASVFNSMKGKVSFN 239
Query: 218 RDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
D T+NV++ GW LG +E ++V K++ PD
Sbjct: 240 VD--TYNVVVGGWSKLGRVNEIEKVMKEMEVEGFSPD 274
>Medtr2g100200.1 | PPR containing plant-like protein | HC |
chr2:43021639-43019553 | 20130731
Length = 527
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 2/157 (1%)
Query: 98 LVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLR 157
++FFNWA K + I+ LG+ F + QV DEM + S ++
Sbjct: 120 VMFFNWALKQPMVPRDVGSYHVIVKALGRRKFFVFMMQVLDEMRLNGIKADLLMLSIVID 179
Query: 158 RFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLH 217
F A V +AI +F + GL D + LL LCR HV A ++F+S + +
Sbjct: 180 SFVNAGHVSKAIQLFGNLDDLGLCRDTEVLNVLLSCLCRRCHVGAAASVFNSMKGKVSFN 239
Query: 218 RDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
D T+NV++ GW LG +E ++V K++ PD
Sbjct: 240 VD--TYNVVVGGWSKLGRVNEIEKVMKEMEVEGFSPD 274
>Medtr6g075180.1 | PPR containing plant-like protein | HC |
chr6:27846701-27844575 | 20130731
Length = 524
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 17/225 (7%)
Query: 52 VQNLLKFRRDKPTDQVERALDLCGFXXXXXXXXXXXRRHRSDWKPALVFFNWASKADSYA 111
+ NLL FR +E+AL+ G R R D K A FF WA D+Y+
Sbjct: 58 MDNLLGFR------NMEKALENLGVPLTTPLVTGVLHRLRYDEKIAFRFFTWAGHQDNYS 111
Query: 112 PTSRVCNEILDILG----KMSRFEELHQVFDEMS-HREGLVNEDTFSTLLRRFAAAHKVE 166
+ V N+++DIL K+ +F + V + M + + V D +LR++ +
Sbjct: 112 HEACVYNDMMDILSSTRYKVKQFRIVCDVLEYMKRNNKSTVPVDVLMDILRKYTEKYLTH 171
Query: 167 EAISMFYTREQFGLDL--DLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWN 224
+ F R++ + +++AF LL LC+ VE+AE L+ ++ + D T+N
Sbjct: 172 --VQKFAKRKRIRVKTQPEINAFNFLLDALCKCCLVEEAEGLYKRMRKKINPNGD--TYN 227
Query: 225 VILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCFAG 269
+++ GWC + N +V ++++ +PD N A C G
Sbjct: 228 ILVFGWCRVRNPSRGMKVLEEMIQLGHKPDNFTYNTALDTYCKEG 272
>Medtr3g078580.1 | PPR containing plant-like protein | HC |
chr3:35401646-35399196 | 20130731
Length = 490
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 4/175 (2%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
AL FF + +Y + +DI ++ + + M TF+ L
Sbjct: 83 ALQFFKHLDRHPTYIHSISSFEHAVDIAARLREYNTAWALMGRMRALRLGPTPKTFAILA 142
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQL 216
R+A K +A+ +F + + G DL++F T+L LC+ K VE A LF + F+
Sbjct: 143 ERYATGGKAHKAVKVFLSMHEHGCHQDLNSFNTILDVLCKTKRVEMANNLFKTLRGRFKC 202
Query: 217 HRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCFAGCG 271
D ++N++ NGWC++ A +V K+++ DP + LL + CG
Sbjct: 203 --DSVSYNIMANGWCLIKRTPMALQVLKEMVERGV--DPTMVTYNTLLKGYFRCG 253
>Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0110:45179-40986 | 20130731
Length = 542
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
P + N ++D L K+ R + DEM R N T+S+LL H+V++AI+
Sbjct: 367 VPNTVTYNSLIDGLCKLGRMSDAWDFIDEMHDRGQPANIITYSSLLDGLCKNHQVDKAIT 426
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ + G+ LD+ + L+ LC+ + DA+ ++ H D + + V++NG
Sbjct: 427 LLTKIKNQGIQLDIYTYTILVDGLCKNGKLRDAQEVYQVLLNN-TYHLDARIYTVMINGL 485
Query: 231 CVLGNAHEAKRVWKDIMASKCRPD 254
C G EA + + + C PD
Sbjct: 486 CKEGFFDEALSLLSKMEDNGCTPD 509
>Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24933458-24936238 | 20130731
Length = 614
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 75/148 (50%), Gaps = 1/148 (0%)
Query: 107 ADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVE 166
+ S AP + N ++D L K R + + +EM +R + T+S+LL H+V+
Sbjct: 372 SKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVD 431
Query: 167 EAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVI 226
+AI++ + G+ ++ + L+ LC+ ++DA+ ++ + H D+K +NV+
Sbjct: 432 KAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIK-GYHLDVKMYNVM 490
Query: 227 LNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+NG C G EA + + + C PD
Sbjct: 491 VNGLCKEGLFDEALSLVSKMEDNGCIPD 518
>Medtr2g102210.1 | PPR containing plant-like protein | HC |
chr2:43984589-43987676 | 20130731
Length = 639
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
+++ LGK R+E +++F E+ G + ++ +++ F + EA+ +F ++ G
Sbjct: 448 LINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLG 507
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEA 239
D+ A+ L+ + R +++A +LF + E + DI + N+ILNG G A
Sbjct: 508 CIPDVYAYNALITGMVRADMMDEAFSLFRT-MEENGCNPDINSHNIILNGLARTGGPKRA 566
Query: 240 KRVWKDIMASKCRPDPRKGNWAPLLSCFAGCGM 272
++ + +S +PD ++ +L C + G+
Sbjct: 567 MEMFAKMKSSTIKPDAV--SYNTVLGCLSRAGL 597
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 11/163 (6%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDT--FST 154
AL F + K PT+ N ++ +L + E++H++++EM EG DT +S
Sbjct: 179 ALSIF-YQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCS-EGHCFPDTVTYSA 236
Query: 155 LLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREF 214
L+ F ++ + A+ +F ++ GL + TL+ + VE+A L H E
Sbjct: 237 LISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVH----EM 292
Query: 215 QLHR---DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
++ R + T+ ++ G G +A V+K+++ C+PD
Sbjct: 293 RMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPD 335
>Medtr4g094245.2 | PPR containing plant-like protein | HC |
chr4:37513939-37510767 | 20130731
Length = 456
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 97 ALVFFNWASKAD---SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGL-VNEDTF 152
+L FFNWA Y PTS EI+ IL + ++ + + +M+H L ++
Sbjct: 86 SLRFFNWAQSLHHHPPYTPTSVEFEEIVTILANSNNYQTMWSIIHQMTHHHHLSLSPSAV 145
Query: 153 STLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAR 212
S+L+ + +++++ +F + F +L + +LL LC K A L R
Sbjct: 146 SSLIESYGRHRHIDQSVQLFNKCKIFNCPQNLQLYNSLLFALCESKLFHAAYALIRRMLR 205
Query: 213 EFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKG 258
+ + D T+ +++N WC G EA++ K+ M+ K P +G
Sbjct: 206 K-GISPDKHTYALLVNAWCSSGKMREAQQFLKE-MSDKGFTPPVRG 249
>Medtr4g094245.1 | PPR containing plant-like protein | HC |
chr4:37513947-37510767 | 20130731
Length = 456
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 97 ALVFFNWASKAD---SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGL-VNEDTF 152
+L FFNWA Y PTS EI+ IL + ++ + + +M+H L ++
Sbjct: 86 SLRFFNWAQSLHHHPPYTPTSVEFEEIVTILANSNNYQTMWSIIHQMTHHHHLSLSPSAV 145
Query: 153 STLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAR 212
S+L+ + +++++ +F + F +L + +LL LC K A L R
Sbjct: 146 SSLIESYGRHRHIDQSVQLFNKCKIFNCPQNLQLYNSLLFALCESKLFHAAYALIRRMLR 205
Query: 213 EFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKG 258
+ + D T+ +++N WC G EA++ K+ M+ K P +G
Sbjct: 206 K-GISPDKHTYALLVNAWCSSGKMREAQQFLKE-MSDKGFTPPVRG 249
>Medtr4g108650.1 | PPR containing plant-like protein | HC |
chr4:44994513-44997905 | 20130731
Length = 850
Score = 64.3 bits (155), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 71/137 (51%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N +L+ L K ++ EE+ ++F M+ + N T++T++ + KV EA+ + +
Sbjct: 500 NTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKS 559
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
GL D+ +F TL+ C+ ++ A LF +++ + T+N+I++ + N
Sbjct: 560 KGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMK 619
Query: 238 EAKRVWKDIMASKCRPD 254
A R++ ++ + C PD
Sbjct: 620 MALRLFSEMKKNGCDPD 636
Score = 50.4 bits (119), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 1/143 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N+++ L K E ++FD++ R N TF+ ++ ++ A+ +
Sbjct: 214 PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRL 273
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ GL D+ + T++ LCR V +AE H D T+N I++G+C
Sbjct: 274 LGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDF-TYNSIIDGYC 332
Query: 232 VLGNAHEAKRVWKDIMASKCRPD 254
G +A R+ KD + +PD
Sbjct: 333 KKGMVVDANRILKDAVFKGFKPD 355
Score = 48.9 bits (115), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 78/179 (43%), Gaps = 17/179 (9%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEM-SHREGLVNE 149
++D AL FN + + T +L LG +F E+ + EM S+ + + E
Sbjct: 17 QNDPLKALEIFNSSKNEQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLE 76
Query: 150 DTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS 209
+ +R + K++EA+ F + F D + ++ ++ L + + A ++
Sbjct: 77 GVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVY-M 135
Query: 210 KAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCFA 268
+ ++ ++ D+ T+ + + +C G + A R+ +++ P+L CF+
Sbjct: 136 RMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNM---------------PVLGCFS 179
>Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24729620-24732624 | 20130731
Length = 557
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N ++D LGK+ + + ++ DEM R N T++++L H V++AI++
Sbjct: 383 PNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIAL 442
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQLHRDIKTWNVILNGW 230
+ G+ D+ + L+ LC+ +EDA+ +F + + L D+ T+ V++ G+
Sbjct: 443 LTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNL--DVYTYTVMIQGF 500
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDPR 256
CV G A + + + C P+ +
Sbjct: 501 CVKGLFDAALALLSKMEDNGCIPNAK 526
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 108 DSYAPTSRVCN-----EILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAA 162
DS A + N +++ L K+ +E +F+EM R+ + N T+++L+
Sbjct: 339 DSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKL 398
Query: 163 HKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKT 222
K+ + + G ++ + ++L LC+ HV+ A L + ++ + D+ T
Sbjct: 399 GKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALL-TNLKDQGIRPDMYT 457
Query: 223 WNVILNGWCVLGNAHEAKRVWKDIMA 248
+ V++ G C G +A++V++D++
Sbjct: 458 YTVLIKGLCQSGKLEDAQKVFEDLLV 483
>Medtr3g008430.2 | PPR containing plant-like protein | HC |
chr3:1537892-1535131 | 20130731
Length = 503
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 87/220 (39%), Gaps = 4/220 (1%)
Query: 36 RFLHSQPEHAAGAGAFVQNLLKFRRDKPTDQVERALDLCGFXXXXXXXXXXXRRHRSDWK 95
RF S + +L P E +L L G + K
Sbjct: 18 RFFSSISSQTQNDAELISKIL-LTHHNPYHFTESSLQLNGITLTPILLTQTLTLLKHHSK 76
Query: 96 PALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTL 155
AL N++ + + + N ++DI+ K+ +F+ Q+ EM TF L
Sbjct: 77 IALSLHNFSKSLPNPPLSLQSYNLLIDIVSKVHQFDLASQLIVEMDQINLPPTPTTFFIL 136
Query: 156 LRRFAAAHKVEEAISMFYTREQF-GLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREF 214
++R +A+ +A+ F E + L D F LL LC+Y +V+ A LF+ + F
Sbjct: 137 IKRLISANLTRQAVRAFNEIESYTDTKLTSDHFTYLLDTLCKYGYVKHACELFNRNSNRF 196
Query: 215 QLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
D+K + V++ GWC +G A ++ P+
Sbjct: 197 V--ADVKMYTVLIYGWCKIGRFKTALSFLNEMKVKGVEPN 234
>Medtr3g008430.1 | PPR containing plant-like protein | HC |
chr3:1537892-1533804 | 20130731
Length = 503
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 87/220 (39%), Gaps = 4/220 (1%)
Query: 36 RFLHSQPEHAAGAGAFVQNLLKFRRDKPTDQVERALDLCGFXXXXXXXXXXXRRHRSDWK 95
RF S + +L P E +L L G + K
Sbjct: 18 RFFSSISSQTQNDAELISKIL-LTHHNPYHFTESSLQLNGITLTPILLTQTLTLLKHHSK 76
Query: 96 PALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTL 155
AL N++ + + + N ++DI+ K+ +F+ Q+ EM TF L
Sbjct: 77 IALSLHNFSKSLPNPPLSLQSYNLLIDIVSKVHQFDLASQLIVEMDQINLPPTPTTFFIL 136
Query: 156 LRRFAAAHKVEEAISMFYTREQF-GLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREF 214
++R +A+ +A+ F E + L D F LL LC+Y +V+ A LF+ + F
Sbjct: 137 IKRLISANLTRQAVRAFNEIESYTDTKLTSDHFTYLLDTLCKYGYVKHACELFNRNSNRF 196
Query: 215 QLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
D+K + V++ GWC +G A ++ P+
Sbjct: 197 V--ADVKMYTVLIYGWCKIGRFKTALSFLNEMKVKGVEPN 234
>Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:15728469-15726667 | 20130731
Length = 537
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 70/137 (51%), Gaps = 1/137 (0%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N I+D L K + ++++ EM + N TF++L+ F +++EA +FY
Sbjct: 201 NTIIDSLCKHKFVTDAYELYSEMITKRISPNIITFNSLIYGFCIVGQLKEAFGLFYQMLL 260
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
++ D+ F L+ LC+ +++A+ + +E + D+ T+N +++G+C++ +
Sbjct: 261 KNINPDIYTFNILVDVLCKEGKIKEAKNVIAVMMKE-GVEPDVVTYNSLMDGYCLVKEVY 319
Query: 238 EAKRVWKDIMASKCRPD 254
EAK V I PD
Sbjct: 320 EAKHVLNIISRMGAAPD 336
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 6/160 (3%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGL-VNEDTFSTL 155
AL FN ++ P N ++D L K R + DEM H G+ N T+++L
Sbjct: 349 ALSLFNEM-RSKGITPDKVTYNSLIDGLCKARRIPCAWEFVDEM-HANGIPANIFTYNSL 406
Query: 156 LRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREF 214
+ H V++AI + + G+ D+ + L+ LC+ ++DA+ +F + +
Sbjct: 407 IDALCKNHHVDKAIVLVKKIKDQGIQSDMYTYSILIDGLCKQGRLKDAQVIFQDLLIKGY 466
Query: 215 QLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
L ++ T+++++NG C G EA + + + C PD
Sbjct: 467 NL--NVCTYSIMINGLCSKGLFDEATTLLSKMEDNGCIPD 504
>Medtr4g040410.1 | PPR containing plant-like protein | HC |
chr4:14488883-14491771 | 20130731
Length = 524
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 123 ILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDL 182
IL K R ++ +F E+ V+ TF+ L+R F A +++EA FG
Sbjct: 172 ILVKCGRLDDAVSLFREIVRLNLNVDSFTFNILIRGFCVAGEIDEAFRFLNDMRNFGCCP 231
Query: 183 DLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRV 242
D+ ++ TL+ LCR V+ A L +E D+ ++ ++++G+C L N EA +
Sbjct: 232 DVVSYNTLMTGLCRVNDVDRARDLL----KEINSPNDV-SYMIVISGYCKLSNMKEASSI 286
Query: 243 WKDIMASKCRP 253
+ +++ S +P
Sbjct: 287 FNEMVRSGVQP 297
>Medtr1g112240.1 | PPR containing plant-like protein | HC |
chr1:50767348-50763755 | 20130731
Length = 559
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R R W + W S+ P N ++D G+ ++E + ++ + N
Sbjct: 112 RMRKKWDSIISICKWILLRSSFKPDVICYNLLIDAFGQKFLYKEAESTYLQLHEARCIPN 171
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
EDT++ L++ + + K++ A ++F +GL + + L + + + AE +F
Sbjct: 172 EDTYALLIKAYCMSGKLQSAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNFDKAEEIFK 231
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCFA 268
R+ ++++ +++N + G ++ A +V+ ++++ KC+P+ + L++ FA
Sbjct: 232 RMKRD-GCKLSLESYTMLINLYGKAGKSYMALKVFDEMLSQKCKPNI--CTYTALVNAFA 288
Query: 269 GCGM 272
G+
Sbjct: 289 REGL 292
>Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC |
chr7:24639377-24633699 | 20130731
Length = 713
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 1/137 (0%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N +++ L K R E ++F EM E N TFS L+ F VEE + E+
Sbjct: 168 NTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEK 227
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
GL+ D+ + L+ C +E + LF+ R+ + ++ T++ ++N C
Sbjct: 228 MGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRK-NVTPNVVTYSCLMNALCKKQKWK 286
Query: 238 EAKRVWKDIMASKCRPD 254
EA ++ + K RPD
Sbjct: 287 EAAQMLDTMTGCKVRPD 303
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + N I++ L K R ++ + + M+ + + T+STL++ K++EA+ +
Sbjct: 337 PNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDL 396
Query: 172 F--YTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNG 229
++F + D+ AF ++ LC+ + + A+ ++++ E +I T+N++++G
Sbjct: 397 LNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMV-ERGFPSNIVTYNILIDG 455
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPD 254
+ G +A +WKD + S P+
Sbjct: 456 YLSAGKLTKALELWKDAVDSGISPN 480
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 1/143 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P+ CN ++D L K ++ + V +M+ + S L+ F K A +
Sbjct: 57 PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ G L++ F LL C+ A LF R L D ++N ++NG C
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNC-LIPDCVSYNTVINGLC 175
Query: 232 VLGNAHEAKRVWKDIMASKCRPD 254
EAK ++K++ +C+P+
Sbjct: 176 KGKRLVEAKELFKEMKGGECKPN 198
>Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30150151 | 20130731
Length = 527
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + N ++D L K+ R ++ DEM R + T+++L H+V+ AI++
Sbjct: 353 PNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSLFDGLCKNHQVDRAIAL 412
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ G+ + ++ L + LC+ +EDA+ ++ + H D K + V++NG C
Sbjct: 413 LKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIK-GYHLDAKMYTVMINGLC 471
Query: 232 VLGNAHEAKRVWKDIMASKCRPD 254
G EA + + + C PD
Sbjct: 472 KEGFFDEALSLLSKMKDNGCTPD 494
>Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30152005 | 20130731
Length = 527
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + N ++D L K+ R ++ DEM R + T+++L H+V+ AI++
Sbjct: 353 PNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSLFDGLCKNHQVDRAIAL 412
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ G+ + ++ L + LC+ +EDA+ ++ + H D K + V++NG C
Sbjct: 413 LKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIK-GYHLDAKMYTVMINGLC 471
Query: 232 VLGNAHEAKRVWKDIMASKCRPD 254
G EA + + + C PD
Sbjct: 472 KEGFFDEALSLLSKMKDNGCTPD 494
>Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:16704461-16701708 | 20130731
Length = 567
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + N ++D K R ++ D+M R N T+++LL H V++AI++
Sbjct: 393 PNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIAL 452
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTW--NVILNG 229
+ G+ D+ + TL+ LC+ ++DA+ +F + ++ TW N+++NG
Sbjct: 453 VNNFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIK---GYNLPTWTYNIMING 509
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPD 254
C+ G EA+ + + + C PD
Sbjct: 510 LCLEGLLDEAETLLSKMEDNGCIPD 534
>Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29098071-29100300 | 20130731
Length = 590
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + ++D L K R Q+ D+M R N T++++L H+V++AI++
Sbjct: 398 PDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIAL 457
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQLHRDIKTWNVILNGW 230
+ G D+ + L+ LC+ +EDA +F + + L D+ + +++ G+
Sbjct: 458 LTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNL--DVYAYTIMIQGF 515
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDPR 256
CV G +EA + + + C PD +
Sbjct: 516 CVEGLFNEALALLSKMEDNGCIPDAK 541
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + N I+D + K+ E +F EM + + T+S L+ F K+++AI +
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDL 282
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
F + D+ F L+ C+ +++ +T+F ++ + + T+N +++G+C
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQ-GIKPNFVTYNSLMDGYC 341
Query: 232 VLGNAHEAKRVWKDIMASKCRPD 254
++ ++AK ++ + PD
Sbjct: 342 LVKEVNKAKSIFNTMAQGGVNPD 364
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 126 KMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLD 185
K+ +F+E +F EM + + + T+S+L+ + + ++ A+ + G+ ++
Sbjct: 377 KIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNIC 436
Query: 186 AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD 245
+ ++L LC+ V+ A L +K ++ DI T+++++ G C G +A++V++D
Sbjct: 437 TYNSILDALCKTHQVDKAIALL-TKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFED 495
Query: 246 IMA 248
++
Sbjct: 496 LLV 498
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 123 ILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDL 182
ILGK+ ++ +F++M + TF+ L+ F K++E ++F + G+
Sbjct: 272 ILGKL---KDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKP 328
Query: 183 DLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRV 242
+ + +L+ C K V A+++F++ A+ ++ DI+++++++NG+C + EA +
Sbjct: 329 NFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG-GVNPDIQSYSIMINGFCKIKKFDEAMNL 387
Query: 243 WKDIMASKCRPD 254
+K++ PD
Sbjct: 388 FKEMHRKNIIPD 399
>Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0572:2027-3679 | 20130731
Length = 538
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 73/145 (50%), Gaps = 3/145 (2%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
AP + N ++D L K R ++ DEM + T+++L+ H V++AI+
Sbjct: 363 APDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIA 422
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQLHRDIKTWNVILNG 229
+ + G+ LD+ + L+ LC+ ++DA+ +F + + L + T+ +++NG
Sbjct: 423 LVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNL--TVWTYTIMING 480
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPD 254
C+ G +EA+ + + + C PD
Sbjct: 481 LCLEGLLNEAETLLSKMEDNGCVPD 505
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
AP +R + +++ K+ ++ +F EM R + T+++L+ + ++ A
Sbjct: 328 APNARSYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWE 387
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ G D+ + +L+ LC+ HV+ A L K ++ + D+ T+N++++G
Sbjct: 388 LVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALV-KKIKDQGIQLDMYTYNILIDGL 446
Query: 231 CVLGNAHEAKRVWKDIM 247
C G +A+ +++D++
Sbjct: 447 CKQGRLKDAQVIFQDLL 463
>Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr3:33997007-33999751 | 20130731
Length = 579
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N ++D L K+ + ++ DEM V+ T+++LL H +++AI++
Sbjct: 285 PDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITL 344
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ G+ ++ + TL+ LC+ +EDA +F E H + T+NV++NG C
Sbjct: 345 VKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTE-GYHITVWTYNVMINGLC 403
Query: 232 VLGNAHEAKRVWKDIMASKCRPD 254
G EA + + + C PD
Sbjct: 404 KKGLFDEALALLSRMEDNACIPD 426
>Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:25449369-25454062 | 20130731
Length = 742
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + ++D L K R ++ DEM R N T+S++L H+VEEAI +
Sbjct: 451 PDVVTYSSLVDGLCKSERIPNALKLVDEMHDRGQPPNIFTYSSILDALLKKHQVEEAIEL 510
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQLHRDIKTWNVILNGW 230
F + G+ ++ + + LC+ +EDA +F + +R+ TW V+++G+
Sbjct: 511 FKEFKDKGIQPNVYTYTIFIDGLCKNGRLEDAWEVFEDLLVNSYNHNRNKYTWTVMIHGF 570
Query: 231 CVLGNAHEAKRVWKDIMASKCRPD 254
C G EA + ++ + C PD
Sbjct: 571 CRKGLFDEALTLLSNMKDNSCIPD 594
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Query: 107 ADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVE 166
+++ PT N ++D K + ++ V M +N T+STL+R F K++
Sbjct: 271 SENINPTVYTFNILVDGFCKEGKVKDAKVVLAVMMKAGVKLNAVTYSTLIRGFCIVGKLK 330
Query: 167 EAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVI 226
EA+ +F ++ ++ F L+ C+ + ++ A + + E + ++ T++ +
Sbjct: 331 EAVDLFNKMILGKVNPNVYTFTILVDAFCKEEKIDKANYVLNV-MMEKDVTPNVITYSCL 389
Query: 227 LNGWCVLGNAHEAKRVWKDI 246
L G+C++ +EAKR++K +
Sbjct: 390 LYGYCLVNEVNEAKRIFKSM 409
>Medtr8g072150.1 | PPR containing plant-like protein | HC |
chr8:30459094-30456922 | 20130731
Length = 506
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 80/155 (51%), Gaps = 7/155 (4%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
A+ FF WA + + ++ N ++D+LG+ FE + M +EG+++ TF ++
Sbjct: 99 AIKFFRWAGRLRKH--SAHAWNLMVDLLGRNQLFEPMWDAVRTMK-QEGVLSLPTFVSVF 155
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK----AR 212
+ + A +V EA+ F +++ +D ++ A +LL +CR ++ F K
Sbjct: 156 QSYCMAGRVNEAVMSFDVMDKYDIDKNVVAVNSLLSAICREENQTSVGVEFLEKKVTGKD 215
Query: 213 EFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIM 247
E ++ D ++ ++L GW GNA +AK + +++
Sbjct: 216 EGKIELDGDSYAILLEGWEKEGNATKAKTTFGEMV 250
>Medtr8g102710.1 | PPR containing plant-like protein | HC |
chr8:43240632-43242952 | 20130731
Length = 520
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 45/257 (17%)
Query: 17 LFPLNPN------PVKSIPPPLF------TRRFL--HSQPEHAAGAGAFVQNLLKFRRDK 62
LFPL + P + I PL R + H P H +L F
Sbjct: 17 LFPLVQHKFIHSFPTQQISVPLLPELVNEISRIVSDHRHPRHDLEL-----SLTPFSTQI 71
Query: 63 PTDQVERALDLC---GFXXXXXXXXXXXRRHRSDWKPALVFFNWASKADSYAPTSRVCNE 119
TD VE+ L C GF HR FF WA + + + +
Sbjct: 72 STDLVEQVLKRCNHLGFSA-----------HR--------FFLWAKSIPGFQHSVQSFHI 112
Query: 120 ILDILGKMSRFEELHQVFDEM--SHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
+++ILG+ +F L E S + + F + ++ A + AI F ++
Sbjct: 113 LVEILGRSKQFAILWDFLIETRESDSSCKITNEIFWIIFTAYSRADLPDGAIRSFVRMDE 172
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
FG+ + LL LC+ KHV A+ F F L KT+++++NGW +G++
Sbjct: 173 FGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSHFLL--TTKTYSILINGWGKIGDSG 230
Query: 238 EAKRVWKDIMASKCRPD 254
+A+ ++ ++ C D
Sbjct: 231 KARELFDAMLEQGCHVD 247
>Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:18204785-18193518 | 20130731
Length = 952
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
PT N ++ L + + E+ Q+ DEM+ NE T++TL++ +A+ E+A
Sbjct: 616 PTVHTYNALILGLVEKCQMEKALQILDEMNLAGVSPNEHTYTTLMQGYASLGDTEKAFQY 675
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
F + GL++D+ + LL C+ ++ A + + + ++ R+ +N++++GW
Sbjct: 676 FTILKNDGLEIDVYTYEALLKACCKSGRMQSALAVTKEMSSK-KIPRNTFVYNILIDGWA 734
Query: 232 VLGNAHEAKRVWKDIMASKCRPD 254
G+ EA + + + +PD
Sbjct: 735 RRGDVWEAADLMQQMRKEGVQPD 757
>Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:122626-120973 | 20130731
Length = 496
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + + ++D L K R ++ D+M R N T+++LL H+V++AI++
Sbjct: 322 PNTVTYSSLIDALCKSGRISHAWELLDQMHDRGQPANIITYNSLLHALCKNHQVDKAIAL 381
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQLHRDIKTWNVILNGW 230
+ G+ +++ + L+ LC+ +E+A+ +F + +++ + T+N ++NG
Sbjct: 382 VKKIKDQGIQPNINTYNILIDGLCKEGRLENAQVIFQDLLIKGYKV--KVWTYNTMINGL 439
Query: 231 CVLGNAHEAKRVWKDIMASKCRPD 254
C+ G EA + + + + C PD
Sbjct: 440 CLEGLFDEAMTLLEKMEDNGCTPD 463
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 70/137 (51%), Gaps = 1/137 (0%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N I+D L K E ++++ +M ++ N T S+L+ F +++EA +F+
Sbjct: 156 NIIIDSLCKEKLVTEAYELYSQMILKKISPNVVTLSSLIYGFCIVGQLKEAFGLFHEMLL 215
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
++ ++ F L+ LC+ +++A+ + +E + + T+N +++G+C+ +
Sbjct: 216 KNINPNIYTFTILIDALCKEGKIKEAKNVIAVMMKE-GVEPTVVTYNTLMDGYCLDNEVN 274
Query: 238 EAKRVWKDIMASKCRPD 254
+AK V+ I + P+
Sbjct: 275 KAKNVFNVIGKRRMTPN 291
>Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29834492-29835631 | 20130731
Length = 379
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 2/161 (1%)
Query: 94 WKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFS 153
K A+ FN + ++ P N ++D K + +E V M + N T+S
Sbjct: 93 LKDAIGLFNKMT-LENINPDMYTFNILVDAFCKEGKMKEAKNVLAMMMKQGMKPNVVTYS 151
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE 213
L+ + KV +A S+F T Q G++ D+ ++ L+ LC+ K ++A LF
Sbjct: 152 ALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCR 211
Query: 214 FQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
++ D+ T+N +++G C LG A ++ ++ PD
Sbjct: 212 -KIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPD 251
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N ++D L K+ + ++ DEM R + T+S++L H+V++AI++
Sbjct: 215 PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL 274
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ G+ ++ + L+ LC+ ++DA +F + + + T+ V+++G+C
Sbjct: 275 LTKLKDQGIRPNMYTYTILIDGLCKGGRLDDAHNIFEDLLVK-GYNITVNTYTVMIHGFC 333
Query: 232 VLGNAHEAKRVWKDIMASKCRPD 254
G EA + + + C P+
Sbjct: 334 NKGLFDEALALLSKMKDNSCFPN 356
>Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr4:44263594-44262119 | 20130731
Length = 440
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
AP + N ++D L K R ++ + DEM + + T+++LL H+V++AI+
Sbjct: 265 APDTITYNSLIDGLCKSGRISDVWDLIDEMHNIGQPADVITYNSLLDALCKNHQVDKAIT 324
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ + G+ ++ + L+ LC+ ++DA+ ++ + + H D+K ++V++NG
Sbjct: 325 LLTKIKDQGIQPNMYTYTILVDGLCKNGRLKDAQVVYQNLLIK-GYHLDVKMYSVMVNGL 383
Query: 231 CVLGNAHEAKRVWKDIMASKCRPD 254
C G +A + + + C P+
Sbjct: 384 CKEGLFDDALSLVSKMEDNSCTPN 407
>Medtr1g011520.1 | PPR containing plant-like protein | HC |
chr1:2060030-2064273 | 20130731
Length = 587
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 97/251 (38%), Gaps = 19/251 (7%)
Query: 18 FPLNPNPVKSIPPPLFTRRFLHSQPEHAAGAGAFVQNLLKFRRDKPTDQVERALDLCGFX 77
P P P+ ++ P ++ SQP + + L P + L G
Sbjct: 43 LPSKPTPIPTLNPNPNSKP-ESSQPTFSPNDFTLISTLFTNPSISPGSSLLTNLTQTGIK 101
Query: 78 XXXXXXXXXXRRHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEE----- 132
S K + WA + P S + + +++ L KM F++
Sbjct: 102 PTPPLLHAVFDHFASSPKLLHSLYLWALNQPGFKPDSSLFDSVINALAKMKEFDDAWSLV 161
Query: 133 LHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLD--------LDL 184
L ++ + E LV+ TF+ ++RR+A A + AI F +F D ++
Sbjct: 162 LDRIRRDDDDDEKLVSVGTFAIIIRRYARAGMHKAAIRTF----EFAKDKKSIVDSVSEM 217
Query: 185 DAFRTLLMWLCRYKHVEDA-ETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVW 243
F L+ LC+ +A E L K + I+ +N++LNGW A+R+W
Sbjct: 218 SLFEILIDSLCKEGSAREASEYLLRRKETDLGWVPSIRVYNIMLNGWFRARKLKHAERLW 277
Query: 244 KDIMASKCRPD 254
+++ RP
Sbjct: 278 EEMKNENVRPS 288
>Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:4260886-4260053 | 20130731
Length = 277
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Query: 107 ADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVE 166
A +P ++D + + EE +F +M N TF+ L+ F K+E
Sbjct: 19 ASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIE 78
Query: 167 EAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVI 226
EA ++ T + L D+ A+ +L+ C V A+++F + A E +L D++++N++
Sbjct: 79 EAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMA-ERELSYDVRSYNIM 137
Query: 227 LNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+N +C + EA ++++++ + PD
Sbjct: 138 INEFCKMKMVDEAIKLFEEMPLKQIFPD 165
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 75/158 (47%), Gaps = 3/158 (1%)
Query: 107 ADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVE 166
+++ P N ++D K + EE V + M ++ + +S+L+ + ++V
Sbjct: 54 SENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVF 113
Query: 167 EAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVI 226
+A S+F T + L D+ ++ ++ C+ K V++A LF + Q+ D+ T++ +
Sbjct: 114 KAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLK-QIFPDVVTYHTL 172
Query: 227 LNGWCVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLL 264
++G C G A + D M + P P + P++
Sbjct: 173 IDGLCKSGRLSYAMELV-DEMDDRGEP-PNIITYCPIV 208
>Medtr7g118240.1 | PPR containing plant-like protein | HC |
chr7:49076181-49074826 | 20130731
Length = 451
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Query: 90 HRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNE 149
HR+ +PA F A K + P ++ N ++ + +F++M R+ + +
Sbjct: 159 HRNYLRPAFDLFKDAHKHGVF-PDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDI 217
Query: 150 DTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS 209
++ L++ +V A+ +F G D + TLL LCR K + +A L
Sbjct: 218 QSYRILMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLL-C 276
Query: 210 KAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+ + + DI +N ++ G+C G AH+A +V D+ A+ C P+
Sbjct: 277 RMKVKGCNPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPN 321
>Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:19488986-19490777 | 20130731
Length = 545
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
+ +++ L K R ++FDEM R + T+++LL +H+ ++AI++ +
Sbjct: 377 SSLINGLCKSGRLISAWKLFDEMLDRGQPPDVITYNSLLDALCKSHQTDKAIALLSKMKD 436
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
G+ D+ + L+ LC+ ++DA+ +F + + D+ T+NV++NG C
Sbjct: 437 QGIQADIFTYNILIDGLCKDGRLDDAQKIFRDLLIK-SYNVDVVTYNVMINGLCKESLLD 495
Query: 238 EAKRVWKDIMASKCRPD 254
EA + + A C PD
Sbjct: 496 EALTLLSKMEAKGCIPD 512
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Query: 124 LGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLD 183
L KM +E +F+EM ++ T+S+L+ + ++ A +F G D
Sbjct: 348 LCKMKMLDEAVSLFEEMHSTNMTLDVITYSSLINGLCKSGRLISAWKLFDEMLDRGQPPD 407
Query: 184 LDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVW 243
+ + +LL LC+ H D SK ++ + DI T+N++++G C G +A++++
Sbjct: 408 VITYNSLLDALCK-SHQTDKAIALLSKMKDQGIQADIFTYNILIDGLCKDGRLDDAQKIF 466
Query: 244 KDIMASKCRPD 254
+D++ D
Sbjct: 467 RDLLIKSYNVD 477
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLV-NEDTFSTLLRRFAAAHKVEEAIS 170
P N ++D L K + +E + M +EG+ N T+S L+ + ++V +A
Sbjct: 266 PDVYTFNTLVDALFKEGKVKEAKCLIAVM-MKEGVEPNIVTYSVLMDGYCLVNEVNKAKD 324
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+F + Q G+ D+ ++ ++ LC+ K +++A +LF + + D+ T++ ++NG
Sbjct: 325 IFNSMMQRGMTPDIQSYTIMINGLCKMKMLDEAVSLFE-EMHSTNMTLDVITYSSLINGL 383
Query: 231 CVLGNAHEAKRVWKDIMASKCRPD 254
C G A +++ +++ PD
Sbjct: 384 CKSGRLISAWKLFDEMLDRGQPPD 407
>Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:29734562-29735236 | 20130731
Length = 224
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
I+D L ++ R EE + F+EM N ++ L+R + + ++ + ++ G
Sbjct: 51 IIDGLCRLKRTEEAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEG 110
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEA 239
+ D+ ++ L+ CR VE A+ LF S ++ + D T++ + G EA
Sbjct: 111 ISPDIYSYNALIQIFCRMNKVEKAKKLFDSMSKS-GFNPDNYTYSAFIAALSESGRLEEA 169
Query: 240 KRVWKDIMASKCRPDPRKGNWA 261
K+++ I A+ C PD N
Sbjct: 170 KKMFYSIEANGCSPDSYVCNLV 191
>Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29893284-29894996 | 20130731
Length = 570
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 2/161 (1%)
Query: 94 WKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFS 153
K A+ FN ++ P N ++D K + +E VF M + N T+
Sbjct: 275 LKDAIDLFNKMI-LENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYC 333
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE 213
+L+ + +V +A S+ YT Q G++ D+ ++ L+ C+ K V++A LF +
Sbjct: 334 SLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHK 393
Query: 214 FQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+ D+ T+N +++G C LG A ++ ++ PD
Sbjct: 394 -HIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPD 433
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N ++D L K+ + ++ DEM R + T+S++L H+V++AI++
Sbjct: 397 PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL 456
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ G+ ++ + L+ LC+ +EDA +F + + + T+ V+++G+C
Sbjct: 457 LTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVK-GYNITVNTYTVMIHGFC 515
Query: 232 VLGNAHEAKRVWKDIMASKCRPD 254
G EA + + + C PD
Sbjct: 516 NKGLFDEALTLLSKMKDNSCIPD 538
>Medtr5g044120.1 | PPR containing plant-like protein | HC |
chr5:19397442-19395735 | 20130731
Length = 507
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Query: 94 WKPALVFFNWAS--KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDT 151
W+P FF + K S+ T N++LD++ K + + +E + R GLVN T
Sbjct: 82 WRPVYRFFLFTQQEKNSSFTHTHVSFNKMLDVVAKSRNIDLFWSLVNETARR-GLVNNKT 140
Query: 152 FSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKA 211
F L+ A ++++ + F+ G ++ ++ +C+ K VE+A+ +
Sbjct: 141 FVIGLKTLGGARELKKCVEFFHLMNLNGYGYSVERLNKVVEEMCKVKLVEEAKFVVFKMK 200
Query: 212 REFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+L D ++ +++G+C G+ EA ++W ++ PD
Sbjct: 201 DLIKL--DGVSYKWLISGFCEKGDLIEASKIWNLMVDEGFVPD 241
>Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29954706-29953247 | 20130731
Length = 409
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
P + N ++D L K ++ + DEM +R VN T+++LL H+V++AI+
Sbjct: 234 TPDTISYNSLIDGLCKSGSISDVWDLIDEMHNRCQPVNVITYNSLLDALCKNHQVDKAIA 293
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQLHRDIKTWNVILNG 229
+ + G+ ++ + L+ LC+ + DA ++H + + L ++ +NV++N
Sbjct: 294 LLKKMKDQGIQPNMYTYTILVDGLCKNGRLADAREIYHDLLTKGYPL--NVSMYNVMVNE 351
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPD 254
+C G EA + + + C PD
Sbjct: 352 FCKEGLFDEALSLLSKMEDNGCTPD 376
>Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:15064091-15060484 | 20130731
Length = 545
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 74/146 (50%), Gaps = 3/146 (2%)
Query: 126 KMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLD 185
K+ +E ++F+EM ++ N T+++L+ + + A+ + G ++
Sbjct: 350 KIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNII 409
Query: 186 AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD 245
+ ++L +C+ HV+ A L +K +E + DI T+ V++NG C +G +A++V++D
Sbjct: 410 TYNSILDAICKNNHVDKAIVLL-TKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFED 468
Query: 246 IMASKCRPDPRKGNWAPLLSCFAGCG 271
++ P+ + L++ F G
Sbjct: 469 LLVKGYSPNIY--TYTSLINGFCNKG 492
>Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30027878-30029913 | 20130731
Length = 619
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
Y P + +++ L ++ +D++ +E +N+ ++ L+ + + + A
Sbjct: 127 GYEPNTVTLTTLINGLCLNGEVKKAFHFYDDVIAKEFQLNQFSYGILINGLCKSGETKAA 186
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
+S+ E + D+ + T++ LC+ K V DA L+ S+ E ++ ++ T++ ++
Sbjct: 187 LSLLRMIEGLSVKPDVVMYTTIIDSLCKDKLVTDAYELY-SEMVEKKIFPNVVTYSTLIY 245
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPD 254
G+C++G +A R++ ++M PD
Sbjct: 246 GFCIVGQLKDAVRLFNEMMLKNIDPD 271
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 1/143 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N ++D L K R + + DEM R N T+++L+ H +++AI
Sbjct: 445 PNVYTYNILIDRLCKSGRIADAWYLIDEMHDRGQPANVVTYTSLIDGLCKNHNLDKAIEF 504
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
F +G+ D+ + L+ LC+ +++A +F + H D+ T+ V+++G C
Sbjct: 505 FTKINDWGIQADVHTYTVLIDGLCKGGRLKNALEVFRILLIK-GYHLDVLTYTVMISGLC 563
Query: 232 VLGNAHEAKRVWKDIMASKCRPD 254
G E + + + C PD
Sbjct: 564 KEGLFDEVLTLLSKMEENGCAPD 586
>Medtr1g068960.1 | PPR containing plant-like protein | HC |
chr1:29509792-29507424 | 20130731
Length = 727
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 135 QVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWL 194
++F+EM ++ +E T+S L+ +++EA+ + E G + + TL+ L
Sbjct: 398 EMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGL 457
Query: 195 CRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
C+ + +EDAE +F + + R T+N +++G C EA ++ ++ +PD
Sbjct: 458 CKSRRIEDAEEIF-DQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPD 516
Query: 255 PRKGNWAPLLSCFAGCG 271
K + LL+ F G
Sbjct: 517 --KFTYNSLLTYFCRVG 531
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
++D L R +E + EM N ++TL+ + ++E+A +F E G
Sbjct: 418 LIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLG 477
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEA 239
+ + TL+ LC+ K VE+A L E L D T+N +L +C +G+ +A
Sbjct: 478 VSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIME-GLKPDKFTYNSLLTYFCRVGDIEKA 536
Query: 240 KRVWKDIMASKCRPDPRKGNWAPLLS--CFAGCGMRVAIANPML 281
+ + + ++ C PD + L+ C AG RV +A+ +L
Sbjct: 537 GDIVQTMASNGCEPDIF--TYGTLIGGLCRAG---RVDVASKLL 575
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 2/153 (1%)
Query: 94 WKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFS 153
K AL+ ++ A + V N ++D L K R E+ ++FD+M + T++
Sbjct: 428 LKEALMLLKEM-ESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYN 486
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE 213
TL+ +VEEA + GL D + +LL + CR +E A + + A
Sbjct: 487 TLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASN 546
Query: 214 FQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDI 246
DI T+ ++ G C G A ++ + +
Sbjct: 547 -GCEPDIFTYGTLIGGLCRAGRVDVASKLLRSV 578
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 66/143 (46%), Gaps = 1/143 (0%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
+ P N ++ + K+ FE+ ++ +M RE N T++TL+ +++E A
Sbjct: 302 GFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAA 361
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
+ GL D+ F TL+ LC K+ + A +F + + D T++++++
Sbjct: 362 TDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFE-EMKNKGCKPDEFTYSILID 420
Query: 229 GWCVLGNAHEAKRVWKDIMASKC 251
C EA + K++ +S C
Sbjct: 421 SLCYERRLKEALMLLKEMESSGC 443
>Medtr2g035450.1 | PPR containing plant-like protein | HC |
chr2:15110685-15106845 | 20130731
Length = 647
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Query: 97 ALVFFNWASKADSYA---PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFS 153
AL F+N ++S++ P N ++ L ++ ++ +VF MS R + + T+S
Sbjct: 155 ALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYS 214
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE 213
TL+ +++EA+S+ + G + AF L+ LC+ + A L + +
Sbjct: 215 TLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLK 274
Query: 214 FQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+ ++ T+N +++G C+ G +A + ++A+KC P+
Sbjct: 275 GCVPNEV-TYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPN 314
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Query: 136 VFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLC 195
V+ EM+ + +E +S L+ K++EA+ ++ G+ LD+ A+ +++ C
Sbjct: 442 VWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFC 501
Query: 196 RYKHVEDAETLFHSK-AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+ VE LF+ +L D+ T+N++LN +C + A + ++ C PD
Sbjct: 502 NAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPD 561
>Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29114944-29118519 | 20130731
Length = 652
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + ++D L K R Q+ D+M R T++++L H+V++AI++
Sbjct: 398 PDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIAL 457
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ G+ ++ + L+ LC+ +EDA +F + + ++ T+ +++ G+C
Sbjct: 458 LTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGH-NLNVDTYTIMIQGFC 516
Query: 232 VLGNAHEAKRVWKDIMASKCRPDPR 256
V G +EA + + + C PD +
Sbjct: 517 VEGLFNEALALLSKMEDNGCIPDAK 541
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + N I+D + K+ E +F EM + + T+S L+ F K+ +AI +
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDL 282
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
F + D+ F L+ C+ +++ +T+F ++ + + T+N +++G+C
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQ-GIKPNFVTYNSLMDGYC 341
Query: 232 VLGNAHEAKRVWKDIMASKCRPD 254
++ ++AK ++ + PD
Sbjct: 342 LVKEVNKAKSIFNTMAQGGVNPD 364
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 123 ILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDL 182
ILGK++ +L F++M + TF+ L+ F K++E ++F + G+
Sbjct: 272 ILGKLNDAIDL---FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKP 328
Query: 183 DLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRV 242
+ + +L+ C K V A+++F++ A+ ++ DI+++++++NG+C + EA +
Sbjct: 329 NFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG-GVNPDIQSYSIMINGFCKIKKFDEAMNL 387
Query: 243 WKDIMASKCRPD 254
+K++ PD
Sbjct: 388 FKEMHRKNIIPD 399
>Medtr1g016220.1 | PPR containing plant-like protein | LC |
chr1:4264609-4263675 | 20130731
Length = 282
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 73/144 (50%), Gaps = 1/144 (0%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
+P ++D + + EE +F +M N TF+ L+ F K+EEA +
Sbjct: 28 SPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKN 87
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ T + L D+ A+ +L+ C V A+++F + A E +L D++++N+++N +
Sbjct: 88 VLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMA-ERELSYDVRSYNIMINEF 146
Query: 231 CVLGNAHEAKRVWKDIMASKCRPD 254
C + EA ++++++ + PD
Sbjct: 147 CKMKMVDEAIKLFEEMPLKQIFPD 170
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 75/158 (47%), Gaps = 3/158 (1%)
Query: 107 ADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVE 166
+++ P N ++D K + EE V + M ++ + +S+L+ + ++V
Sbjct: 59 SENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVF 118
Query: 167 EAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVI 226
+A S+F T + L D+ ++ ++ C+ K V++A LF + Q+ D+ T++ +
Sbjct: 119 KAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLK-QIFPDVVTYHTL 177
Query: 227 LNGWCVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLL 264
++G C G A + D M + P P + P++
Sbjct: 178 IDGLCKSGRLSYAMELV-DEMDDRGEP-PNIITYCPIV 213
>Medtr8g105170.1 | PPR containing plant-like protein | LC |
chr8:44353122-44347538 | 20130731
Length = 1106
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Query: 126 KMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLD 185
K + E ++F+EM + +E T++ L+ + A +++EA S+ Q GL ++
Sbjct: 394 KSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVV 453
Query: 186 AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD 245
+ L LC+ ++ A L H +R+ L ++ T+N I+NG C +GN + ++ ++
Sbjct: 454 TYTALADGLCKNGEIDVANELLHEMSRK-GLQPNVYTYNTIVNGLCKIGNIEQTVKLMEE 512
Query: 246 IMASKCRPD 254
+ + PD
Sbjct: 513 MDLAGFYPD 521
>Medtr5g048070.1 | PPR containing plant-like protein | HC |
chr5:21053107-21055317 | 20130731
Length = 504
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 1/159 (0%)
Query: 97 ALVFFNWAS-KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTL 155
AL FN A K Y+ V +++ILG R +E+ + ++M + F +
Sbjct: 29 ALEIFNEAKLKYPKYSHNGPVYATMINILGTSGRLKEMSDLIEQMKEDSCECKDSVFVSA 88
Query: 156 LRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQ 215
++ +A V+EAIS++ QF +F TLL + +EDA +LF + ++
Sbjct: 89 IKTYAKEGLVDEAISLYKNIPQFNCVNWTQSFNTLLEIMVNENKLEDAHSLFVESSCGWE 148
Query: 216 LHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+ ++ N+++ C + A ++++++ C P+
Sbjct: 149 VKSRVQALNLLMYALCRKSRSDLALQIFQEMDYQGCYPN 187
>Medtr1g045880.1 | PPR containing plant-like protein | HC |
chr1:17272396-17266667 | 20130731
Length = 624
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Query: 124 LGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLD 183
LG M R +FDEMS R+ + N T+ L+ A ++E A + + G+DL+
Sbjct: 335 LGNMKR---AFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLN 391
Query: 184 LDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVW 243
L F T + CR +++A L + + ++ D+ T+N++ NG C L EAK +
Sbjct: 392 LVIFNTTMDGYCRRGKMDEALRL-QAIMEKKGINADVFTYNILANGLCKLHRYDEAKCIL 450
Query: 244 KDIMASKCRPD 254
++ +P+
Sbjct: 451 NSMVEKGVKPN 461
>Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:29740887-29742940 | 20130731
Length = 653
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
I+D L ++ R EE + F+EM N ++ L+R + + ++ + ++ G
Sbjct: 492 IIDGLCRLKRTEEAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEG 551
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEA 239
+ D+ ++ L+ CR VE A+ LF S ++ + D T++ + G EA
Sbjct: 552 ISPDIYSYNALIQIFCRMNKVEKAKKLFDSMSKS-GFNPDNYTYSAFIAALSESGRLEEA 610
Query: 240 KRVWKDIMASKCRPD 254
K+++ + A+ C PD
Sbjct: 611 KKMFYSMEANGCSPD 625
>Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:24225916-24227245 | 20130731
Length = 393
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
P + N ++D L K R ++ EM R N T+++LL H+V++AI+
Sbjct: 225 VPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAIT 284
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE-FQLHRDIKTWNVILNG 229
+ + G+ ++ + L+ LC+ + DA+ ++ + +QL D + + V++NG
Sbjct: 285 LLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQL--DARIYTVMING 342
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPD 254
C G EA + + +KC PD
Sbjct: 343 LCKEGFLDEALSLLSKMEDNKCTPD 367
>Medtr1g086500.1 | PPR containing plant-like protein | HC |
chr1:38701697-38699329 | 20130731
Length = 518
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHR-EGLVNEDTFSTL 155
L FF + + + T+ + +L ILG+ F+ + ++ E + + ++ T +
Sbjct: 77 TLEFFRYTGRRKGFYHTAYSLDTMLYILGRSRMFDHVWELLIEARRKDQNVITPRTVMVV 136
Query: 156 LRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQ 215
L R A V + + F ++ D ++ F LL LC+ K + DA ++HS F+
Sbjct: 137 LGRVAKVCSVRQTVETFRKFKKIVPDYGVNCFNALLRTLCQEKSMTDARNVYHSLKHNFR 196
Query: 216 LHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+++T+N++L+GW N +A+ ++ PD
Sbjct: 197 --PNLQTFNILLSGW---KNVEDAELFVNEMKEMGVEPD 230
>Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:24220458-24218920 | 20130731
Length = 512
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
PT + ++D K + +E VF M ++ N T+++L+ + ++V +A S+
Sbjct: 277 PTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESI 336
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLF---HSKAREFQLHRDIKTWNVILN 228
F T Q G+ D+ ++ ++ C+ K V++A LF H K Q+ D+ T+N +++
Sbjct: 337 FNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCK----QIFPDVVTYNSLID 392
Query: 229 GWCVLGNAHEAKRVWKDI 246
G C G A ++ ++
Sbjct: 393 GLCKSGRISYALKLIGEM 410
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 87/188 (46%), Gaps = 20/188 (10%)
Query: 91 RSDWKPALVFFNW----------ASKADS---------YAPTSRVCNEILDILGKMSRFE 131
+ D KP +V +N +KA+S AP + ++ K+ +
Sbjct: 307 KKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVD 366
Query: 132 ELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLL 191
E ++F+EM ++ + T+++L+ + ++ A+ + G ++ + +LL
Sbjct: 367 EAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLL 426
Query: 192 MWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKC 251
LC+ HV+ A L +K ++ + + T+N+++NG C G +A++V++D++ +
Sbjct: 427 DALCKNHHVDKAIELL-TKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGY 485
Query: 252 RPDPRKGN 259
D N
Sbjct: 486 NIDVYTYN 493
>Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0237:19937-22785 | 20130731
Length = 679
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N +++ K+ +E ++F EM H++ + T+S+L+ + ++ A+ +
Sbjct: 477 NIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHY 536
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
G D+ + ++L LC+ HV+ A TL +K + + D+ T+ +++ G C G
Sbjct: 537 RGQQPDIITYNSILDALCKKHHVDKAITLL-TKLKGQGIRPDMNTYTILVKGLCQSGKLE 595
Query: 238 EAKRVWKDIMA 248
+A++V++D++
Sbjct: 596 DARKVFEDLLV 606
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + ++D L K R ++ DEM +R + T++++L H V++AI++
Sbjct: 506 PDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITL 565
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQLHRDIKTWNVILNGW 230
+ G+ D++ + L+ LC+ +EDA +F + + L D+ + V++ G+
Sbjct: 566 LTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNL--DVYAYTVMIQGF 623
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDPR 256
C G EA + + + C PD +
Sbjct: 624 CDKGLFDEALALLSKMEENGCIPDAK 649
>Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29865926-29867095 | 20130731
Length = 389
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 2/161 (1%)
Query: 94 WKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFS 153
K A+ FN + ++ P N ++D K + +E V M + N T+S
Sbjct: 93 LKDAIGLFNKMT-LENINPDMYTFNILVDAFCKEGKMKEAKNVLAMMMKQGMKPNVVTYS 151
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE 213
L+ + KV +A S+F T Q G++ D+ ++ L+ LC+ K ++A LF
Sbjct: 152 ALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCR 211
Query: 214 FQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
++ D+ T+N +++G C G A ++ ++ PD
Sbjct: 212 -KIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPPD 251
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N ++D L K + ++ DEM R + T+S++L H+V++AI++
Sbjct: 215 PDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL 274
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQLHRDIKTWNVILNGW 230
+ G+ ++ + L+ LC+ +EDA +F + + + + T+ V+++G+
Sbjct: 275 LTNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNIT--VNTYTVMIHGF 332
Query: 231 CVLGNAHEAKRVWKDIMASKCRPD 254
C G EA + + + C P+
Sbjct: 333 CNKGLFDEALALLSKMKDNSCFPN 356
>Medtr8g071970.1 | PPR containing plant-like protein | HC |
chr8:30370460-30375133 | 20130731
Length = 823
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 75/160 (46%), Gaps = 12/160 (7%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P+ + CN ++ L K + + +VFD M L++ T++T + + K++EA+ +
Sbjct: 208 PSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGL 267
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
F + G+ ++ + L+ LC+ +E+A +F + E +++ + T+ +++NG
Sbjct: 268 FLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEA-LMFKGRMVENKVNPSLVTYGILVNGLV 326
Query: 232 VLGNAHEAKRVWKDIMASKCRPD-----------PRKGNW 260
EA V ++ + P+ RKGN
Sbjct: 327 KFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNM 366
>Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29349925-29348099 | 20130731
Length = 543
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 74/134 (55%), Gaps = 8/134 (5%)
Query: 123 ILGKMSRFEELHQVFDEMSHREGLVNED--TFSTLLRRFAAAHKVEEAISMFYTREQFGL 180
ILGK++ + +F++M E +N D TFS L+ F +V+EA ++ + G+
Sbjct: 243 ILGKLN---DAIGLFNKMISEE--INPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGI 297
Query: 181 DLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAK 240
D+ + +L+ C K V A+++F++ A+ + +++++N+++NG+C + EA
Sbjct: 298 KPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQG-GVTANVQSYNIMINGFCKIKKVDEAM 356
Query: 241 RVWKDIMASKCRPD 254
++K++ PD
Sbjct: 357 NLFKEMHCKNIIPD 370
>Medtr3g067670.1 | PPR containing plant-like protein | HC |
chr3:30265173-30262608 | 20130731
Length = 478
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 100 FFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRF 159
FF WA ++ T N ++DILGK F+ + M REGL++ TF+++ +
Sbjct: 82 FFRWAGHRINHNHTPYAWNLVIDILGKNCLFDAMWDAVKSM-RREGLLSRSTFASIFASY 140
Query: 160 AAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLC-RYKHVEDAETLFHSKAREFQLHR 218
A ++ +AI F + +G+ D+ + +LL +C + VE + L +K +
Sbjct: 141 VNAGRLADAIMTFEVMDGYGVVRDVVSLNSLLSAVCGSGRSVEACDYLQIAKK---LVRP 197
Query: 219 DIKTWNVILNGWCVLGNAHEAKRVWKDIM 247
D T+ +++ G GN AK + +++
Sbjct: 198 DSDTYAILMEGLESDGNVVGAKETFAEMV 226
>Medtr3g067670.2 | PPR containing plant-like protein | HC |
chr3:30265171-30262608 | 20130731
Length = 478
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 100 FFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRF 159
FF WA ++ T N ++DILGK F+ + M REGL++ TF+++ +
Sbjct: 82 FFRWAGHRINHNHTPYAWNLVIDILGKNCLFDAMWDAVKSM-RREGLLSRSTFASIFASY 140
Query: 160 AAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLC-RYKHVEDAETLFHSKAREFQLHR 218
A ++ +AI F + +G+ D+ + +LL +C + VE + L +K +
Sbjct: 141 VNAGRLADAIMTFEVMDGYGVVRDVVSLNSLLSAVCGSGRSVEACDYLQIAKK---LVRP 197
Query: 219 DIKTWNVILNGWCVLGNAHEAKRVWKDIM 247
D T+ +++ G GN AK + +++
Sbjct: 198 DSDTYAILMEGLESDGNVVGAKETFAEMV 226
>Medtr7g044790.1 | PPR containing plant-like protein | HC |
chr7:15059729-15056941 | 20130731
Length = 721
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 2/146 (1%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED-TFSTLLRRFAAAHKVEEAI 169
+P N +L +L K R +V+DEM G+ + T++ L+R F V+E
Sbjct: 187 SPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGF 246
Query: 170 SMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQ-LHRDIKTWNVILN 228
F F D D+ + TL+ LCR ++ A L + +++ + L D+ T+ ++
Sbjct: 247 YFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIR 306
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPD 254
G+C EA + +++ +P+
Sbjct: 307 GYCRKQEVDEALDILEEMNGRGLKPN 332
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 82/185 (44%), Gaps = 6/185 (3%)
Query: 89 RHRSDWKPALVFFNWA-SKADSYAPTSRVCNEILDILGKMSRFE---ELHQVFDEMSHRE 144
RH A +FFNW K S+ P + +L+ILG+ ++ S+ E
Sbjct: 93 RHIKVPTKAFLFFNWIHEKGFSHNPQTYFI--MLEILGREKNLNIARNFLYSIEKRSNGE 150
Query: 145 GLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAE 204
+ + F++L+R + A +E++ +F + G+ + F ++L+ L + A+
Sbjct: 151 VKLEDRFFNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAK 210
Query: 205 TLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLL 264
++ + + + D T+N+++ G+C E +K++ + C PD N
Sbjct: 211 EVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDG 270
Query: 265 SCFAG 269
C AG
Sbjct: 271 LCRAG 275
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED--TFSTLLRRFAAAHKVEEAI 169
P N ++D L + + + H + + MS + ++ D T++TL+R + +V+EA+
Sbjct: 259 PDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEAL 318
Query: 170 SMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNG 229
+ GL ++ + TL+ LC + + + + + D T+N ++N
Sbjct: 319 DILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINS 378
Query: 230 WCVLGNAHEAKRVWKDI 246
C GN EA +V++++
Sbjct: 379 HCCAGNLDEAFKVFENM 395
>Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0652:1980-674 | 20130731
Length = 320
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 71/146 (48%), Gaps = 7/146 (4%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + N ++D L K R ++ D+M R + T+++ L H+V++AI++
Sbjct: 146 PNTVTYNSLIDGLCKSGRISHAWELLDQMHDRGQPADVITYNSFLHALCKNHQVDKAIAL 205
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS---KAREFQLHRDIKTWNVILN 228
+ G+ +++ + L+ LC+ +E+A+ +F K + L T+ +++N
Sbjct: 206 VKKIKDQGIQPNINTYSILIDGLCKEGRLENAQVIFQDLLIKGYKVTLW----TYTIMIN 261
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPD 254
G C+ G EA + + + + C P+
Sbjct: 262 GLCLEGLFDEAMTLLEKMEDNGCIPN 287
>Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0177:26079-27820 | 20130731
Length = 524
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 77/159 (48%), Gaps = 4/159 (2%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
AL FN + P + ++D L K R ++ D+M R + T+++ L
Sbjct: 329 ALSLFNEM-RCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFL 387
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQ 215
H+V++A+++ + G+ +++ + L+ LC+ E+A+ +F + ++
Sbjct: 388 HALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYK 447
Query: 216 LHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+ + T+N+++NG C+ G EA + + + + C PD
Sbjct: 448 V--TVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPD 484
>Medtr4g108060.1 | PPR containing plant-like protein | HC |
chr4:44791239-44788813 | 20130731
Length = 583
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N +++ K +E +VFD++S +E + N TF+T++ + +EE S+
Sbjct: 341 PNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSL 400
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ G+ ++ + L+ LCR + ++ A+ L + + L D+ T+N++++G C
Sbjct: 401 CSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENK-GLKGDVVTYNILIDGLC 459
Query: 232 VLGNAHEAKRVWKDIMASKCRPD 254
+ A+++ ++ +P+
Sbjct: 460 KNDKSRNAEKLLNEMFNLGLKPN 482
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 125 GKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDL 184
GKM + E + EM + NE TF+TL+ F V A F ++ GL ++
Sbjct: 252 GKMYKAEAFMK---EMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNI 308
Query: 185 DAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWK 244
+ +L+ LC +E+A L+ K L +I T+N ++NG+C EA +V+
Sbjct: 309 VTYNSLINGLCNNGKLEEAIDLW-DKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFD 367
Query: 245 DIMASKCRPD 254
D+ + P+
Sbjct: 368 DVSKQELVPN 377
>Medtr7g017570.1 | PPR containing plant protein | HC |
chr7:5604657-5608116 | 20130731
Length = 890
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 78/147 (53%), Gaps = 7/147 (4%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
P N LD L K + + +VF+EMS + N T+S ++ +A A+ +E+A++
Sbjct: 351 VPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALN 410
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQ---LHRDIKTWNVIL 227
++ + + LD ++ TL+ + ++++A K +E + ++RD+ T+N +L
Sbjct: 411 LYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEA----IEKCKEMERSGINRDVVTYNALL 466
Query: 228 NGWCVLGNAHEAKRVWKDIMASKCRPD 254
+G+ G E +R+++++ A P+
Sbjct: 467 SGYGKHGMYDEVRRLFEEMKARNIYPN 493
>Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:5845943-5843116 | 20130731
Length = 790
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 72/139 (51%), Gaps = 8/139 (5%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLV-NEDTFSTLLRRFAAAHKVEEAISMFYTREQF 178
++ L K + EE+ ++ + M L+ ++ T++TL+ + ++A+ E+
Sbjct: 343 VMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEK 402
Query: 179 GLDLDLDAFRTLLMWLCRYKHVEDAETL---FHSKAREFQLHRDIKTWNVILNGWCVLGN 235
G +D + ++ C+ K+++ A++L +SK + D+ T+ I++G+C +G
Sbjct: 403 GFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKG----CNPDVVTYTAIIDGFCRVGK 458
Query: 236 AHEAKRVWKDIMASKCRPD 254
EAK++ + + C+P+
Sbjct: 459 IDEAKKMLQQMYKHGCKPN 477
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 1/166 (0%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R + D + AL FF WA + Y + V +LDIL K + ++ M+ R +
Sbjct: 172 RSQDDERIALDFFYWADRQWRYRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERS 231
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
+ FS ++ ++ A + A+ + ++ G++ DL T + L + +E A F
Sbjct: 232 PEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKA-LRFL 290
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+ + + DI ++N ++ G+C + +A + ++ C PD
Sbjct: 291 ERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPD 336
>Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:41923424-41925949 | 20130731
Length = 776
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 75/204 (36%), Gaps = 28/204 (13%)
Query: 93 DWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTF 152
D N K D PT+ V N +L L K + ++ +VFDEM R + N TF
Sbjct: 169 DLNKCFELINLMEK-DGIRPTTYVYNLVLGGLCKAKKIKDARKVFDEMIQRNVVPNTVTF 227
Query: 153 STLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAR 212
+TL+ + ++EA + ++ + LL LC +EDA+ + R
Sbjct: 228 NTLIDGYCKVGGIDEAFRLRARMNGPYSKANVVTYNCLLSGLCGLGRLEDAKRVLLEMER 287
Query: 213 EFQLHRDIK---------------------------TWNVILNGWCVLGNAHEAKRVWKD 245
+ L R T N +LNG C +G +AK +
Sbjct: 288 KGFLPRGFSSLVFDDQLMSGNENGLLNGNGTQVDEWTCNALLNGLCKVGKVEKAKEILAK 347
Query: 246 IMASKCRPDPRKGNWAPLLSCFAG 269
+ ++ P P N C G
Sbjct: 348 LESNGVVPSPVSYNILVNAYCQKG 371
>Medtr5g090210.1 | PPR containing plant-like protein | HC |
chr5:39298399-39301458 | 20130731
Length = 730
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 68/136 (50%), Gaps = 1/136 (0%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N +L+ L + ++ ++F EM R + T +TL+ + + +A+S+F T
Sbjct: 452 NTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTL 511
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
L D+ + TL+ C+ +E A+ L++ ++ ++++++NG+C LG
Sbjct: 512 RSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISR-EIFPSYISFSILINGFCSLGLVS 570
Query: 238 EAKRVWKDIMASKCRP 253
EA R+W ++ +P
Sbjct: 571 EAFRLWDEMKEKGIKP 586
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 69/135 (51%), Gaps = 3/135 (2%)
Query: 138 DEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRY 197
+EM R +++ T++TLL +++A +F + G+ D TL+ C+
Sbjct: 437 NEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKD 496
Query: 198 KHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRK 257
++ A +LF + L D+ T+N +++G+C +G +AK +W D+++ + P
Sbjct: 497 GNMTKALSLFETMTLR-SLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYI- 554
Query: 258 GNWAPLLSCFAGCGM 272
+++ L++ F G+
Sbjct: 555 -SFSILINGFCSLGL 568
>Medtr4g108060.2 | PPR containing plant-like protein | HC |
chr4:44790940-44788813 | 20130731
Length = 449
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N +++ K +E +VFD++S +E + N TF+T++ + +EE S+
Sbjct: 207 PNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSL 266
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ G+ ++ + L+ LCR + ++ A+ L + + L D+ T+N++++G C
Sbjct: 267 CSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENK-GLKGDVVTYNILIDGLC 325
Query: 232 VLGNAHEAKRVWKDIMASKCRPD 254
+ A+++ ++ +P+
Sbjct: 326 KNDKSRNAEKLLNEMFNLGLKPN 348
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 125 GKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDL 184
GKM + E + EM + NE TF+TL+ F V A F ++ GL ++
Sbjct: 118 GKMYKAEAFMK---EMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNI 174
Query: 185 DAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWK 244
+ +L+ LC +E+A L+ K L +I T+N ++NG+C EA +V+
Sbjct: 175 VTYNSLINGLCNNGKLEEAIDLW-DKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFD 233
Query: 245 DIMASKCRPD 254
D+ + P+
Sbjct: 234 DVSKQELVPN 243
>Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29881712-29885144 | 20130731
Length = 457
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
++D L K R ++ DEM R + T++++L H V++AI++ + G
Sbjct: 223 LIDGLCKSGRISYALELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQG 282
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQLHRDIKTWNVILNGWCVLGNAHE 238
+ D++ + L+ LCR +EDA +F + + L D+ + V++ G+C G E
Sbjct: 283 IRPDMNTYTILVKGLCRSGKLEDARKVFEDLLVKGYNL--DVYAYTVMIQGFCDKGLFDE 340
Query: 239 AKRVWKDIMASKCRPDPR 256
A + + + C PD +
Sbjct: 341 ALALLSKMEENGCIPDAK 358
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 126 KMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLD 185
K+ +E ++F EM H++ + T+S L+ + ++ A+ + G D+
Sbjct: 194 KIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDRGQQPDII 253
Query: 186 AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD 245
+ ++L LC+ HV+ A L +K + + D+ T+ +++ G C G +A++V++D
Sbjct: 254 TYNSILDALCKKHHVDKAIALL-TKLKGQGIRPDMNTYTILVKGLCRSGKLEDARKVFED 312
Query: 246 IMA 248
++
Sbjct: 313 LLV 315
>Medtr4g074390.1 | PPR containing plant-like protein | HC |
chr4:28340117-28337429 | 20130731
Length = 583
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N +++ K +E +V D++S +E + N TF+T++ + +EE S+
Sbjct: 341 PNIVTYNALINGFCKKKMMKEATKVLDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSL 400
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ + G+ ++ ++ L+ LCR + ++ A+ L + + L D+ T+N++++G C
Sbjct: 401 CSSMLEEGILPNVSTYKCLIAGLCRKQDLQAAKELLNEMENK-GLKGDVVTYNILIDGLC 459
Query: 232 VLGNAHEAKRVWKDIMASKCRPD 254
+ A+++ ++ +P+
Sbjct: 460 KNDKSRNAEKLLNEMFNLGLKPN 482
>Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29908532-29910037 | 20130731
Length = 501
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
++D L K R ++ DEM R + T++++L H V++AI++ + G
Sbjct: 335 LIDGLCKSGRISYALELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQG 394
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQLHRDIKTWNVILNGWCVLGNAHE 238
+ D++ + L+ LCR +EDA +F + + L D+ + V++ G+C G E
Sbjct: 395 IRPDMNTYTILVKGLCRSGKLEDARKVFEDLLVKGYNL--DVYAYTVMIQGFCDKGLFDE 452
Query: 239 AKRVWKDIMASKCRPDPR 256
A + + + C PD +
Sbjct: 453 ALALLSKMEENGCIPDAK 470
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 126 KMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLD 185
K+ +E ++F EM H++ + T+S L+ + ++ A+ + G D+
Sbjct: 306 KIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDRGQQPDII 365
Query: 186 AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD 245
+ ++L LC+ HV+ A L +K + + D+ T+ +++ G C G +A++V++D
Sbjct: 366 TYNSILDALCKKHHVDKAIALL-TKLKGQGIRPDMNTYTILVKGLCRSGKLEDARKVFED 424
Query: 246 IMA 248
++
Sbjct: 425 LLV 427
>Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:28927923-28926100 | 20130731
Length = 403
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 95 KPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFST 154
K +F N A + P + N +++ K+ + +F+EM R+ + N T+++
Sbjct: 179 KAKSIFNNMAQGGVN--PDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNS 236
Query: 155 LLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREF 214
L+ + K+ A+ + G D+ + +LL LC+ HV+ A L +K ++
Sbjct: 237 LIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHHVDKAIALL-TKLKDQ 295
Query: 215 QLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMA 248
L ++ T+ +++NG C G +A+ +++D++
Sbjct: 296 GLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLV 329
>Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 77/159 (48%), Gaps = 4/159 (2%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
AL F + + AP + + ++D L K R+ + DEM N T+++L+
Sbjct: 362 ALSLF-YEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLI 420
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQ 215
H++++AI++ + G+ D+ + L+ LC+ + +A +F + +
Sbjct: 421 DALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARDVFQDLLIKGYS 480
Query: 216 LHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
L D++T+N+++NG C +G EA+ + + + PD
Sbjct: 481 L--DVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPD 517
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
I+D L K E + ++ EM + N TF++L+ F + ++A +F+
Sbjct: 209 IIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKN 268
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEA 239
++ D+ F ++ LC+ +++A+++ +E + D+ T+N +++G+C++ ++A
Sbjct: 269 INPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVM-PDVVTYNSLMDGYCLVNEVNKA 327
Query: 240 KRVWKDIMASKCRPDPRKGNWAPLLS 265
K V I+ SK R P +++ +++
Sbjct: 328 KHVL--IIISKIRVAPDAHSYSIMIN 351
>Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 77/159 (48%), Gaps = 4/159 (2%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
AL F + + AP + + ++D L K R+ + DEM N T+++L+
Sbjct: 362 ALSLF-YEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLI 420
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQ 215
H++++AI++ + G+ D+ + L+ LC+ + +A +F + +
Sbjct: 421 DALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARDVFQDLLIKGYS 480
Query: 216 LHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
L D++T+N+++NG C +G EA+ + + + PD
Sbjct: 481 L--DVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPD 517
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
I+D L K E + ++ EM + N TF++L+ F + ++A +F+
Sbjct: 209 IIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKN 268
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEA 239
++ D+ F ++ LC+ +++A+++ +E + D+ T+N +++G+C++ ++A
Sbjct: 269 INPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVM-PDVVTYNSLMDGYCLVNEVNKA 327
Query: 240 KRVWKDIMASKCRPDPRKGNWAPLLS 265
K V I+ SK R P +++ +++
Sbjct: 328 KHVL--IIISKIRVAPDAHSYSIMIN 351
>Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 77/159 (48%), Gaps = 4/159 (2%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
AL F + + AP + + ++D L K R+ + DEM N T+++L+
Sbjct: 362 ALSLF-YEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLI 420
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQ 215
H++++AI++ + G+ D+ + L+ LC+ + +A +F + +
Sbjct: 421 DALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARDVFQDLLIKGYS 480
Query: 216 LHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
L D++T+N+++NG C +G EA+ + + + PD
Sbjct: 481 L--DVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPD 517
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
I+D L K E + ++ EM + N TF++L+ F + ++A +F+
Sbjct: 209 IIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKN 268
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEA 239
++ D+ F ++ LC+ +++A+++ +E + D+ T+N +++G+C++ ++A
Sbjct: 269 INPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVM-PDVVTYNSLMDGYCLVNEVNKA 327
Query: 240 KRVWKDIMASKCRPDPRKGNWAPLLS 265
K V I+ SK R P +++ +++
Sbjct: 328 KHVL--IIISKIRVAPDAHSYSIMIN 351
>Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29358896-29355839 | 20130731
Length = 517
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + ++D L K + ++ DEM R N T+S++L H+V+ AI++
Sbjct: 280 PNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIAL 339
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
+ G+ ++ + L+ LC+ +EDA +F + + ++ T+ V++ G+C
Sbjct: 340 LTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGH-NLNVYTYTVMIQGFC 398
Query: 232 VLGNAHEAKRVWKDIMASKCRPDPR 256
G EA + + + C P+ +
Sbjct: 399 DKGLFDEALTLLSKMEDNGCIPNAK 423
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Query: 126 KMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLD 185
K+ +E ++ EM H++ + N T+S+L+ + K+ A+ + G ++
Sbjct: 259 KIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIV 318
Query: 186 AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD 245
+ ++L LC+ V++A L ++ + + ++ T+ +++ G C G +A++V++D
Sbjct: 319 TYSSILDALCKNHQVDNAIALL-TQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFED 377
Query: 246 IMA 248
++
Sbjct: 378 LLV 380
>Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891540-24889511 | 20130731
Length = 548
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + + N I+D + K + ++ +M + + T++ L+ F+A K+ AI +
Sbjct: 199 PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDL 258
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
F ++ ++ ++ F L+ C+ V DA+ + ++ + D+ T+N +++G+C
Sbjct: 259 FNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKD-DIKPDVVTYNSLMDGYC 317
Query: 232 VLGNAHEAKRVWKDIMAS 249
+ ++AK ++ D MAS
Sbjct: 318 SINKVNKAKDIF-DSMAS 334
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + ++D L K+ R ++ DEM R N T+S++L H V++AI++
Sbjct: 374 PNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIAL 433
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQLHRDIKTWNVILNGW 230
+ G+ D+ + L+ LC+ +EDA+ +F + + L D+ + V++ G+
Sbjct: 434 LTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNL--DVYAYTVMIQGF 491
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDPR 256
C G +A + + + C P+ +
Sbjct: 492 CDKGFFDKALALLSKMEDNGCIPNAK 517
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 80/180 (44%), Gaps = 26/180 (14%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSR--------------------- 129
+ D KP +V +N S D Y ++V N+ DI M+
Sbjct: 299 KDDIKPDVVTYN--SLMDGYCSINKV-NKAKDIFDSMASGGVIANVQIYTTMVNGFCKIK 355
Query: 130 -FEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFR 188
+E +F+EM R+ + N T+S+L+ ++ A+ + G ++ +
Sbjct: 356 MVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYS 415
Query: 189 TLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMA 248
++L LC+ HV+ A L + ++ + D+ T+ +++ G C G +A+ V++D++
Sbjct: 416 SILDALCKNHHVDKAIALL-TNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLV 474
>Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891533-24888467 | 20130731
Length = 548
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + + N I+D + K + ++ +M + + T++ L+ F+A K+ AI +
Sbjct: 199 PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDL 258
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
F ++ ++ ++ F L+ C+ V DA+ + ++ + D+ T+N +++G+C
Sbjct: 259 FNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKD-DIKPDVVTYNSLMDGYC 317
Query: 232 VLGNAHEAKRVWKDIMAS 249
+ ++AK ++ D MAS
Sbjct: 318 SINKVNKAKDIF-DSMAS 334
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + ++D L K+ R ++ DEM R N T+S++L H V++AI++
Sbjct: 374 PNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIAL 433
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQLHRDIKTWNVILNGW 230
+ G+ D+ + L+ LC+ +EDA+ +F + + L D+ + V++ G+
Sbjct: 434 LTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNL--DVYAYTVMIQGF 491
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDPR 256
C G +A + + + C P+ +
Sbjct: 492 CDKGFFDKALALLSKMEDNGCIPNAK 517
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 80/180 (44%), Gaps = 26/180 (14%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSR--------------------- 129
+ D KP +V +N S D Y ++V N+ DI M+
Sbjct: 299 KDDIKPDVVTYN--SLMDGYCSINKV-NKAKDIFDSMASGGVIANVQIYTTMVNGFCKIK 355
Query: 130 -FEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFR 188
+E +F+EM R+ + N T+S+L+ ++ A+ + G ++ +
Sbjct: 356 MVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYS 415
Query: 189 TLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMA 248
++L LC+ HV+ A L + ++ + D+ T+ +++ G C G +A+ V++D++
Sbjct: 416 SILDALCKNHHVDKAIALL-TNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLV 474
>Medtr6g079440.1 | RNA processing factor 2, putative | HC |
chr6:29951090-29949379 | 20130731
Length = 541
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
Query: 107 ADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVE 166
+ + P + N ++D L K R ++ + EM N T+++LL H+V+
Sbjct: 362 SSNMTPDTVSYNSLIDGLCKSGRISDVWDLLVEMHDIGQPANVITYNSLLDALCKNHQVD 421
Query: 167 EAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQLHRDIKTWNV 225
+AI++ + G+ ++ + L+ LC+ +EDA+ ++H + + L ++ +NV
Sbjct: 422 KAIALLKKIKDQGIQPNMYTYTILVDGLCKNGRLEDAQEIYHDLLTKGYPL--NVSMYNV 479
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
++N +C G EA + + + C P+
Sbjct: 480 MVNEFCKEGLFDEALSLLSKMEDNGCTPN 508
>Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:17250153-17251759 | 20130731
Length = 497
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 69/147 (46%), Gaps = 1/147 (0%)
Query: 108 DSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEE 167
++ P + ++D L K R + DEM R N T+++L+ +H+V++
Sbjct: 319 ENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDK 378
Query: 168 AISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVIL 227
AI++ + G+ ++ + L+ LC+ + DA+ +F + + D+ T+++++
Sbjct: 379 AIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGH-NVDVVTYSIMI 437
Query: 228 NGWCVLGNAHEAKRVWKDIMASKCRPD 254
NG C EA + + C PD
Sbjct: 438 NGLCKESLFDEALTLLSKMEDKGCVPD 464
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Query: 119 EILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQF 178
+IL L K + + +F M N T + L+ + ++ A S+F +
Sbjct: 15 KILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKL 74
Query: 179 GLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHE 238
G D+ + TL+ LC V+++ FH + + D ++ ++NG C +G
Sbjct: 75 GYQPDIITYTTLIRGLCLNGQVKESLN-FHDRLVSQGIKLDHVSYGTLINGLCKIGQTGP 133
Query: 239 AKRVWKDIMASKCRPD 254
A R+ + I CRPD
Sbjct: 134 ALRLLRKIEGEICRPD 149
>Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30578711-30577387 | 20130731
Length = 426
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
S P + + ++D LGK+ R + + DEM N T+S+LL + + A
Sbjct: 271 SMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTA 330
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQLHRDIKTWNVIL 227
I +F + G + ++ + L+ LC+ ++DA+ +FH + ++L D++ + V++
Sbjct: 331 IRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRL--DVRLYTVMI 388
Query: 228 NGWC 231
NG C
Sbjct: 389 NGLC 392
>Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29212418-29210681 | 20130731
Length = 465
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 4/164 (2%)
Query: 94 WKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFS 153
K A+ FN +++ P N ++D+ K + ++ DEM R N T+S
Sbjct: 278 LKDAVDLFNKMI-SENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYS 336
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAR 212
++L H+V++A+++ + G+ ++ + L+ LC +EDA +F +
Sbjct: 337 SILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVK 396
Query: 213 EFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPR 256
+ + + T+ V+ G+C G EA + + + C PD +
Sbjct: 397 GYDI--TVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAK 438
>Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29367679-29365974 | 20130731
Length = 559
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
Query: 107 ADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVE 166
++ P N ++D L K+ + ++ DEM R ++ T++++L H+V+
Sbjct: 380 CNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVD 439
Query: 167 EAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVI 226
+AI++ + G+ D+ + TL+ LC+ +EDA +F + + D+ + +
Sbjct: 440 KAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYI-LDVNIYTAM 498
Query: 227 LNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+ G+C G E+ + + + C P+
Sbjct: 499 IQGFCSHGLFDESLDLLSKMEENGCIPN 526
>Medtr5g077930.1 | PPR containing plant-like protein | HC |
chr5:33269909-33266508 | 20130731
Length = 811
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 34/180 (18%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
Y P + N ++ K+ VFDE+S R + +F+TL+ + + VEE
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEG 280
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLF--------------------- 207
+ E + D+ + L+ LC+ VE+A LF
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDG 340
Query: 208 ---HSKA----REFQLHR------DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
H K R F++ + D+ T+N ++NG C G+ EA+++ +++ + +PD
Sbjct: 341 QCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400
>Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:10128811-10130651 | 20130731
Length = 552
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
P + + ++D L K R + ++ EMS R N T+++LL H V++AI+
Sbjct: 377 VPDTITYSSLIDGLCKSGRISDAWELVSEMSDRGQQPNIITYNSLLNALCQNHHVDKAIA 436
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQLHRDIKTWNVILNG 229
+ + G+ L + L+ LC ++DA+ +F + + L D+ T+ ++ G
Sbjct: 437 LLRKFKTQGIQPTLCTYTILIKGLCMSGRLKDAQVVFQDLLIKGYNL--DVYTYTAMIRG 494
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPDPR 256
+C G EA + + + C P+ +
Sbjct: 495 FCYEGLFDEALALLSKMKDNGCMPNAK 521
>Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0054:54977-53081 | 20130731
Length = 521
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 94 WKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFS 153
K A+ FN ++ P N ++D K R ++ V D M ++ N TF+
Sbjct: 274 LKDAIDLFNKMI-LENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFN 332
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE 213
TL+ F K++E ++F + G+ ++ + +L+ C K V A+ +F++ ++
Sbjct: 333 TLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQR 392
Query: 214 FQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+ ++ ++N+++NG+C + +A +++ ++ PD
Sbjct: 393 -GVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPD 432
>Medtr5g095130.1 | PPR containing plant-like protein | HC |
chr5:41578336-41574902 | 20130731
Length = 906
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
K PT ++D L K+ R +E + +F+E +N +S+L+ F ++
Sbjct: 649 KTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRI 708
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
+EA + Q GL + + LL L + + +++A+ F + + + + T+++
Sbjct: 709 DEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQN-MKNLKCSPNAMTYSI 767
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
++NG C++ ++A W+++ +P+
Sbjct: 768 MINGLCMIRKFNKAFVFWQEMQKQGLKPN 796
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 1/144 (0%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
AP N ++D+L K E +V D M N T + ++ R A K++EA S
Sbjct: 409 APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACS 468
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+F + D F +L+ L R V+DA +L+ Q+ ++ + ++ +
Sbjct: 469 IFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIP-NVVVYTSLIQNF 527
Query: 231 CVLGNAHEAKRVWKDIMASKCRPD 254
G + +++K+++ C PD
Sbjct: 528 FKCGRKEDGHKIYKEMVHRGCSPD 551
>Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:21161413-21160178 | 20130731
Length = 411
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
AP N ++D L K R + + +EM +R + T+++LL H+V+ AI+
Sbjct: 236 APDIVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDMAIT 295
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+F + G+ + + L+ LC+ ++DA+ ++ + H D++ + V++NG
Sbjct: 296 LFTKIKDQGIQPYIYTYTILVDGLCKNGRLKDAQEVYQILLIK-GYHLDVRMYTVMINGL 354
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDP 255
C +A + + + C P+P
Sbjct: 355 CKESLFDKALSLLSKMKDNGCTPNP 379
>Medtr3g045420.1 | PPR containing plant-like protein | HC |
chr3:14773131-14777409 | 20130731
Length = 903
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 79/162 (48%), Gaps = 1/162 (0%)
Query: 93 DWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTF 152
D AL FF W + S+ ++ ILG+ F ++ + ++M N T+
Sbjct: 386 DHSVALSFFYWLKRQPSFRHDGHTYTTMVGILGRAREFGAINNLLEQMVKDGCQPNVVTY 445
Query: 153 STLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAR 212
+ L+ + A+ ++EA+++F ++ + D + TL+ + +++ A +++ + +
Sbjct: 446 NRLIHSYGRANYLKEALNVFNQMQEKRCEPDRVTYCTLIDIHAKAGYLDVAMSMYE-RMQ 504
Query: 213 EFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+ L D T++V++N GN A R++ +++ C P+
Sbjct: 505 QVGLSPDTFTYSVMINCLGKSGNLAAADRLFGEMVDQGCVPN 546
>Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222711-45219784 | 20130731
Length = 695
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 1/143 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N ++D L K R E V MS R + T++ L+ + + V EA +
Sbjct: 263 PDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAREL 322
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
F + GL+ D+ + L+ C+ K V++A LF + L I ++N +++G C
Sbjct: 323 FNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK-NLVPTIASYNSLIDGLC 381
Query: 232 VLGNAHEAKRVWKDIMASKCRPD 254
G K++ ++ S PD
Sbjct: 382 NSGRISHVKKLLDEMHGSAQPPD 404
>Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29897140-29898259 | 20130731
Length = 346
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 75/147 (51%), Gaps = 7/147 (4%)
Query: 123 ILGKM----SRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQF 178
I+GK+ R +E VF M ++ N T+++L+ + +V +A S+F T Q
Sbjct: 162 IVGKLKDAIGRVKEAKNVFAMMMKQDIKPNVFTYNSLMDGYCLVKEVNKAKSIFNTMAQG 221
Query: 179 GLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHE 238
G++ D+ ++ L+ C+ K ++A LF +L D+ T+N +++G C LG
Sbjct: 222 GVNPDIHSYNILINGFCKSKMTDEAMNLFEEMHCR-KLIPDVVTYNSLIDGLCKLGKFSY 280
Query: 239 AKRVWKDIMASKCRPDPRKGNWAPLLS 265
A ++ D M + +P P ++ +L+
Sbjct: 281 ALKLV-DEMHDRGQP-PNIITYSSILN 305
>Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222606-45220446 | 20130731
Length = 704
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 1/143 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N ++D L K R E V MS R + T++ L+ + + V EA +
Sbjct: 263 PDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAREL 322
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
F + GL+ D+ + L+ C+ K V++A LF + L I ++N +++G C
Sbjct: 323 FNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK-NLVPTIASYNSLIDGLC 381
Query: 232 VLGNAHEAKRVWKDIMASKCRPD 254
G K++ ++ S PD
Sbjct: 382 NSGRISHVKKLLDEMHGSAQPPD 404
>Medtr6g022260.1 | PPR containing plant-like protein | HC |
chr6:7759035-7757320 | 20130731
Length = 571
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
K++ +PT N ++ K+ + EM R + T++ LL F + +
Sbjct: 366 KSNGLSPTVVTYNTLIAGYSKVGNLAGALNLVKEMEERNIAPTKVTYTILLNGFVRINYM 425
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
E+A + E+ GL D+ + L+ LC +++A LF S E + + ++
Sbjct: 426 EKAFEIHSLMEKSGLVSDVYTYGVLIHGLCMNGSMKEASKLFKS-LDELNMEPNSVIYDT 484
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+++G+C GN + A R+ +++ P+
Sbjct: 485 LIHGYCKEGNCYRALRLLNEMIGKGMVPN 513
>Medtr7g060720.1 | PPR containing plant-like protein, putative | HC
| chr7:21955726-21958466 | 20130731
Length = 535
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 75/144 (52%), Gaps = 7/144 (4%)
Query: 114 SRVCNEILDILGKMSRFEELHQVFDEMSHRE-GLVNEDTFSTLLRRFAAAHKVEEAISMF 172
S +C +++D+L + E+ +++ +S + GL STL+ KV EA ++F
Sbjct: 331 SELCCKVVDLLCEEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARNVF 390
Query: 173 YTREQFGLD--LDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
++FG L + TL+ LC + +A L+ E + + T+N+++ G+
Sbjct: 391 ---DEFGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMV-EKGVAPNAFTYNMLIKGF 446
Query: 231 CVLGNAHEAKRVWKDIMASKCRPD 254
C +GNA E RV ++++ ++C P+
Sbjct: 447 CKVGNAKEGIRVLEEMLENRCLPN 470
>Medtr6g005000.1 | PPR containing plant-like protein | HC |
chr6:556927-554990 | 20130731
Length = 645
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 80/183 (43%), Gaps = 11/183 (6%)
Query: 103 WASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMS----HREGLVNEDTFSTLLRR 158
W + S+ P CN +L+ L K++ E +V++EM HR G TF+ +
Sbjct: 217 WKNVEGSFVPNVVACNCLLNGLSKINYIGECWEVYEEMGRLGIHRNGY----TFNIMTHV 272
Query: 159 FAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHR 218
++ E+ G + DL + L+ C+ + +EDA L+ +
Sbjct: 273 LCREGDSDKVNGFLEKMEEEGFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGIR-GVVP 331
Query: 219 DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCFAGCGMRVAIAN 278
++ +++ ++NG C G EA +++ ++ PD N L+S + G ++ +
Sbjct: 332 NLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSYN--TLISGYCKEGGKMQMCR 389
Query: 279 PML 281
+L
Sbjct: 390 SLL 392
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
Query: 100 FFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRF 159
F S+ Y P ++ + L + EE + EM+ + +N T+ ++
Sbjct: 461 FLIRISQDGDYVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSMKLNLTTYKAIISCL 520
Query: 160 AAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRD 219
+ EA ++ G+ DL+ R L+ C V+ A +L A+EFQ++ D
Sbjct: 521 CRVKRTSEAENLLEEMVSLGILPDLEIKRALINGYCEENDVDKAVSLLKFFAKEFQVY-D 579
Query: 220 IKTWNVILNGWCVLGNAHE 238
+++N I+ +C +GN E
Sbjct: 580 TESYNAIVKVFCEVGNVAE 598
>Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29902734-29903683 | 20130731
Length = 276
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 77/179 (43%), Gaps = 19/179 (10%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRV------C-------NEILDILGKMSRFEELHQVF 137
+ KP +V +N S D Y V C + ++D+L K R ++
Sbjct: 73 KQGIKPDVVTYN--SLMDGYCIVKEVNKAKKKCIANKFFRSTLIDVLCKSRRVSYALELV 130
Query: 138 DEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRY 197
DEM R + T++++L H +AI++ + G+ +++ + L+ LCR
Sbjct: 131 DEMHDRGQQPDIITYNSILDALCKKHHAGKAIALLTKLKDQGIRPNMNTYTILVKGLCRS 190
Query: 198 KHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPR 256
+EDA +F + + D+ + V++ G+C G E + + + C PD +
Sbjct: 191 GKLEDARKVFE----DLGYNLDVYAYTVMIQGFCDKGLFDEVLALLSKMEENGCIPDAK 245
>Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29875611-29877102 | 20130731
Length = 474
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 73/145 (50%), Gaps = 3/145 (2%)
Query: 127 MSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDA 186
+ R ++ +F++M +E TF+TL+ F V E ++ + G+ D+
Sbjct: 251 VGRLKDAIGLFNDMKLENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIIT 310
Query: 187 FRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDI 246
+ +L+ C K V+ A+ +F++ + + +++++++++NG+C + EA +++++
Sbjct: 311 YNSLMDGYCLVKEVDKAKNIFNTMVQR-GVTANVRSYSIMINGFCKVKMMDEAMNLFQEM 369
Query: 247 MASKCRPDPRKGNWAPLLSCFAGCG 271
+ PD ++ L+ F G
Sbjct: 370 HCKEIIPDTIA--YSSLIDGFCKSG 392
>Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0308:7816-9441 | 20130731
Length = 541
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
++ P + + ++D L K R ++ DEM R N TFS+LL V
Sbjct: 361 QSKKIIPNTVTYSSLIDGLCKSGRISHAWELLDEMHDRGQPANVITFSSLLHALCKNRHV 420
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK-AREFQLHRDIKTWN 224
++AI + + + ++ + L+ LC+ ++DA+ +F + + L + T+N
Sbjct: 421 DKAIELVKKLKDRDIQPNMYTYNILIDGLCKQGRLKDAQVIFQDLFIKGYNL--TVWTYN 478
Query: 225 VILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+++NG C+ G EA + + + C P+
Sbjct: 479 IMINGLCLEGLLDEALALLSKMEDNGCIPN 508
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + +++ L K +E F EM ++ + N T+S+L+ + ++ A +
Sbjct: 332 PNVHCYSVVINGLCKNKLIDEAMDFFKEMQSKKIIPNTVTYSSLIDGLCKSGRISHAWEL 391
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
G ++ F +LL LC+ +HV+ A L K ++ + ++ T+N++++G C
Sbjct: 392 LDEMHDRGQPANVITFSSLLHALCKNRHVDKAIELV-KKLKDRDIQPNMYTYNILIDGLC 450
Query: 232 VLGNAHEAKRVWKDI 246
G +A+ +++D+
Sbjct: 451 KQGRLKDAQVIFQDL 465
>Medtr7g011520.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3110709-3109039 | 20130731
Length = 508
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 109 SYAPTSR-VCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEE 167
+YA R CNE+ + ++ VF +M + + +S L R + K E
Sbjct: 182 AYAAAIRGFCNEM--------KLDKAEDVFYDMKSWGLVPDFHVYSPLTRGYCETGKDSE 233
Query: 168 AISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVIL 227
+ +F +Q L LD A+ +L LC+ V+DA + + + DIK + ++
Sbjct: 234 VVDLFKEIKQSCLFLDGVAYNIVLDSLCKLGKVDDAVSTLE-ELTSMNIDLDIKHYTTLI 292
Query: 228 NGWCVLGNAHEAKRVWKDIMASKCRPD 254
NG+C+ G EA+ ++K++ +PD
Sbjct: 293 NGYCLQGKTVEAQCLFKEMEEKGFKPD 319
>Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:16349669-16351514 | 20130731
Length = 540
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
AP SR N +++ K+ +E +F EM R ++ T+++L+ A ++ A
Sbjct: 330 APNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWE 389
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ + D+ + +L+ C+ +HV+ A L K +E + ++ T+N++++G
Sbjct: 390 LVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALV-KKIKEHGIQPNMCTYNILIDGL 448
Query: 231 CVLGNAHEAKRVWKDIM 247
C G A+ V++D++
Sbjct: 449 CKGGQLKNAQDVFQDLL 465
>Medtr7g070420.1 | PPR containing plant-like protein | HC |
chr7:25994193-25997035 | 20130731
Length = 737
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLV-NEDTFSTLLRRFAAAHKVEEAISMFY-TR 175
N +++ KM RF+E +V ++M + + TF+TL+ A KV+EA+ +F
Sbjct: 399 NTVINGFCKMGRFDEALKVLNDMLLGKFCAPDVVTFTTLISGLLDAEKVDEALDLFNRVM 458
Query: 176 EQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGN 235
+ GL + + L+ L + K DA +F++ A + + D T+ VI+ G C
Sbjct: 459 PENGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNNMAGD-GITPDSTTYTVIVEGLCECDQ 517
Query: 236 AHEAKRVWKDIM 247
EAK W+ ++
Sbjct: 518 IEEAKSFWQSVI 529
>Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:28329250-28330881 | 20130731
Length = 543
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 66/143 (46%), Gaps = 1/143 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P + + I+D L K S+ E +++ EM + T++TL+ + + A
Sbjct: 192 PDAIIYKTIIDCLCKDSKVETALELYTEMIESGIFPDVFTYTTLIHGLCISDNFKAAFEF 251
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
F ++ + + L+ +LC+ K V +++ L ++ ++ L D+ +N ++ G C
Sbjct: 252 FKEMVSNEINPTVYTYSALMAYLCKRKRVRESKALLNTMIKD-GLEPDLAIFNTLMEGHC 310
Query: 232 VLGNAHEAKRVWKDIMASKCRPD 254
L +AKR++ + PD
Sbjct: 311 SLHQMQKAKRIFYSLPQRGITPD 333
>Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0429:4891-7845 | 20130731
Length = 530
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N I+D L K E ++++ +M ++ + TF++L+ F ++ EA +F+
Sbjct: 215 NTIIDSLCKEKLVTEAYELYSQMIVKKISPDVVTFNSLIYGFCIVGQLIEAFGLFHEMVL 274
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
++ ++ F L+ LC+ +++ A+ L +E + ++ T++ I++G+C++ +
Sbjct: 275 KNINPNVYTFNILVDALCKEGNLKGAKNLLAVMMKEGVI-PNVVTYSSIMDGYCLVNEVN 333
Query: 238 EAKRVWKDIMASKCRPDPRKGN 259
+AK V I PD + N
Sbjct: 334 KAKHVLSTITRMGVPPDAQSYN 355
>Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24265034-24262613 | 20130731
Length = 557
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 3/144 (2%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P N ++D L K R ++ D M R + T+S++L H V++AI++
Sbjct: 383 PNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIAL 442
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQLHRDIKTWNVILNGW 230
+ G+ ++ + L+ LC+ +EDA +F + + L + T+ V++ G+
Sbjct: 443 LIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNL--TVNTYTVMIQGF 500
Query: 231 CVLGNAHEAKRVWKDIMASKCRPD 254
C G EA + + + C PD
Sbjct: 501 CSHGLFDEALSLLSKMKDNSCIPD 524
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
I+D + K + ++ EM R N T+S L+ F K+++AI +F
Sbjct: 216 IIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSEN 275
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEA 239
++ D+ F L+ C+ V++A+ ++ + DI T+N +++G+C++ + A
Sbjct: 276 INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQ-GIKPDIVTYNSLMDGYCLVNEVNMA 334
Query: 240 KRVW 243
K +
Sbjct: 335 KSIL 338
>Medtr7g007400.1 | PPR containing plant-like protein | HC |
chr7:1471949-1474797 | 20130731
Length = 636
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 74/150 (49%), Gaps = 3/150 (2%)
Query: 107 ADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLV-NEDTFSTLLRRFAAAHKV 165
++ ++P N I++ L K R +E +++ ++ + GL ++ T++ L+ +
Sbjct: 349 SEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLED-GFQNGLKPDKFTYNILMSEHCKQENI 407
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
+A+++F + G+ D+ ++ TL+ CR ++++E F R + + KT+
Sbjct: 408 RQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTN-KTYTS 466
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPDP 255
++ G+C GN A + + + C PD
Sbjct: 467 MICGYCREGNLTLAMKFFHRLSDHGCAPDS 496
>Medtr2g041700.1 | PPR containing plant-like protein | HC |
chr2:18319616-18321262 | 20130731
Length = 548
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 50/104 (48%)
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
T + L+R A +++EA + FG D+ + T++ CR V+ A + +
Sbjct: 215 TINILMRGLCRAGEIDEACKLLGDLRSFGCSPDVITYNTIIHGFCRISEVDRARSFLNEV 274
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
Q+ D+ ++ I++G+C L EA ++ +++ S P+
Sbjct: 275 CLNGQVAPDVVSYTTIISGYCKLSRMKEASSLFDEMIRSGTMPN 318
>Medtr2g030540.1 | PPR containing plant-like protein | HC |
chr2:11523849-11519339 | 20130731
Length = 639
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 70/148 (47%), Gaps = 3/148 (2%)
Query: 124 LGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLD 183
L K+ E H++F M + ++D + ++L ++ K+ EAI + + + D
Sbjct: 370 LSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTD 429
Query: 184 LDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVW 243
+ T+ L R K V L+ K ++ DI T+N++++ + G A +++
Sbjct: 430 TIMYNTVFTALGRLKQVSHIHDLYE-KMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIF 488
Query: 244 KDIMASKCRPDPRKGNWAPLLSCFAGCG 271
+++ S C+PD ++ L++C G
Sbjct: 489 EELENSNCQPDVI--SYNSLINCLGKNG 514
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N +LD L K + ++ ++VF++M R + T++ ++R A K +E++++F +
Sbjct: 227 NMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLE 286
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
G L+L A+ T++ L + + + A LF SK E + T++V+LN G +
Sbjct: 287 KGFTLNLIAYNTMIEALAKGRMADKAVLLF-SKMVENGCQPNEFTYSVLLNVLVAEGQLN 345
Query: 238 EAKRV 242
+ +
Sbjct: 346 KLDNI 350
>Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:138663-140807 | 20130731
Length = 452
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N I+D L K + + ++ EM ++ + TFS+L+ F + ++A +F+
Sbjct: 138 NTIIDSLCKDKLVLDAYGLYSEMIAKKIYPDVVTFSSLIYGFCIVGQFKDAFRLFHEMVL 197
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
++ D+ F L+ LC+ V+ A+ L +E + D+ T+ +++G+C++ +
Sbjct: 198 KNINRDVYTFNILVDALCKEGDVKVAKNLLAVMMKEGVI-PDVVTYGSLMDGYCLVNEVN 256
Query: 238 EAKRVWKDIMASKCRPD 254
+AK V+ I PD
Sbjct: 257 KAKHVFNIISQMGVAPD 273
>Medtr1g035250.1 | PPR containing plant-like protein | HC |
chr1:12584008-12586490 | 20130731
Length = 662
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
++ L M E VF M R N TF++L++ F +V +A+ ++ + G
Sbjct: 285 VISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREG 344
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEA 239
+ ++ A+ TL+ LC ++++A ++++ ++ + ++ T++ I+ G+ G+ A
Sbjct: 345 VSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKD-SIRPNVTTYSTIIYGFAKSGDLVSA 403
Query: 240 KRVWKDIMASKCRPD 254
W ++ CRP+
Sbjct: 404 CETWNKMINCGCRPN 418
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/166 (19%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R D +L +F S + ++ T ++D LG+ + + + + +M +
Sbjct: 49 RQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCS 108
Query: 149 EDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFH 208
++ F +++ + ++ E+ + MFY +FG + + + +L L + L++
Sbjct: 109 QELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYN 168
Query: 209 SKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+ E L ++ T+NV+L C G A ++ ++ C PD
Sbjct: 169 NMKSE-GLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPD 213
>Medtr7g091470.1 | PPR containing plant-like protein | HC |
chr7:36185398-36179004 | 20130731
Length = 911
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
+ P + N ++ + R + +V EM R L + TF+ ++ RF ++ A
Sbjct: 632 GFVPNNFAYNSLIGGFCNLGRMAQALKVEKEMRLRGLLPDTFTFNIIIDRFCRQGNMKSA 691
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILN 228
I F + GL D+ F L+ C+ + A+ + + K + L+ DI T+N+ ++
Sbjct: 692 IDAFLDMHRIGLMPDIFTFNILVGGYCKAFDMVRADDIVN-KMYPYGLYPDITTYNIRMH 750
Query: 229 GWCVLGNAHEAKRVWKDIMASKCRPDPRKGN 259
G+C + + A + +++++ P+ N
Sbjct: 751 GYCSVRKMNRAIAILDELVSAGIVPNTVTYN 781
>Medtr3g053350.1 | PPR containing plant-like protein | HC |
chr3:21211857-21206311 | 20130731
Length = 852
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 2/161 (1%)
Query: 94 WKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFS 153
W F+ + K + P N ++ + S +EE+ VFD++ + + T++
Sbjct: 293 WSRVTAIFD-SMKTNGVVPDLYTYNTLITCCRRGSLYEEVVNVFDQIKSAGFVPDRVTYN 351
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE 213
LL FA A + +EA+ + E G + + +L+ R +E+A L + E
Sbjct: 352 ALLDVFAKARRPKEALQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEASRL-KVQMVE 410
Query: 214 FQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+ D+ T+ +L+G+ G A V+ ++ A+ C+P+
Sbjct: 411 KGIKPDVFTYTTLLSGFEKAGKDEFAFEVYDEMKAAGCKPN 451
>Medtr3g053350.2 | PPR containing plant-like protein | HC |
chr3:21211870-21205924 | 20130731
Length = 852
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 2/161 (1%)
Query: 94 WKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFS 153
W F+ + K + P N ++ + S +EE+ VFD++ + + T++
Sbjct: 293 WSRVTAIFD-SMKTNGVVPDLYTYNTLITCCRRGSLYEEVVNVFDQIKSAGFVPDRVTYN 351
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE 213
LL FA A + +EA+ + E G + + +L+ R +E+A L + E
Sbjct: 352 ALLDVFAKARRPKEALQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEASRL-KVQMVE 410
Query: 214 FQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+ D+ T+ +L+G+ G A V+ ++ A+ C+P+
Sbjct: 411 KGIKPDVFTYTTLLSGFEKAGKDEFAFEVYDEMKAAGCKPN 451
>Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
AP N ++D L K R ++ DEM N T++ L+ H V++AI+
Sbjct: 380 APDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIA 439
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ + G+ D+ F L+ LC+ +++A+ +F + + T+N+++NG
Sbjct: 440 LVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSK-GYSVNAWTYNIMVNGL 498
Query: 231 CVLGNAHEAKRVWKDIMASKCRPD 254
C G EA+ + + + PD
Sbjct: 499 CKEGLFDEAEALLSKMDDNGIIPD 522
>Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
AP N ++D L K R ++ DEM N T++ L+ H V++AI+
Sbjct: 380 APDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIA 439
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ + G+ D+ F L+ LC+ +++A+ +F + + T+N+++NG
Sbjct: 440 LVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSK-GYSVNAWTYNIMVNGL 498
Query: 231 CVLGNAHEAKRVWKDIMASKCRPD 254
C G EA+ + + + PD
Sbjct: 499 CKEGLFDEAEALLSKMDDNGIIPD 522
>Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3104228-3097978 | 20130731
Length = 738
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Query: 129 RFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFR 188
F++ V+ M R N FS +L + E + MF ++ GL +D A+
Sbjct: 345 NFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYN 404
Query: 189 TLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMA 248
L LC+ V+DA + + + QL D+K + ++NG+ + G EA+ ++K++
Sbjct: 405 ILFDALCKLGKVDDAVGML-DELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEE 463
Query: 249 SKCRPD 254
+PD
Sbjct: 464 RGFKPD 469
>Medtr7g075010.1 | PPR containing plant-like protein | HC |
chr7:28129559-28126539 | 20130731
Length = 426
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 83/199 (41%), Gaps = 13/199 (6%)
Query: 91 RSDWKPAL---------VFFNWASKA---DSYAPTSRVCNEILDILGKMSRFEELHQVFD 138
R+DW L ++ A A +S+ P R +++ K ++ E +F
Sbjct: 146 RADWLSVLKELKNMDHPLYLEVAEHALVEESFEPNLRDYTKLIHYYSKENQLEAAENIFT 205
Query: 139 EMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYK 198
M R + ++ +T++ ++ A ++ A F + G LD ++ +++M R
Sbjct: 206 LMKQRGFICDQVILTTMVHMYSKAGHLDRAEEYFEEIKLLGEPLDKRSYGSMIMAYIRAG 265
Query: 199 HVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKG 258
E E+L + ++ + + +L + V+GNA A+RV+ I + PD +
Sbjct: 266 MPEKGESLLEEMDAQ-DIYAGSEVYKALLRAYSVIGNAEGAQRVFDAIQLAGIIPDDKMC 324
Query: 259 NWAPLLSCFAGCGMRVAIA 277
+ AG + IA
Sbjct: 325 SLLIYAYSMAGQSQKARIA 343
>Medtr8g098755.1 | PPR containing plant-like protein | HC |
chr8:41238399-41236005 | 20130731
Length = 671
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 117 CNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMF---- 172
CN +L LG+ +++++ EM + + TF L+ +F + +++EA+ +F
Sbjct: 205 CNALLTGLGRERDIHKMNELLAEMEEMKIHPSVITFGILINQFCKSRRIDEALGVFDKLR 264
Query: 173 -YTREQ--FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNG 229
RE+ G++ D+ + TL+ LC+ E+ L E + + T+N +++G
Sbjct: 265 GKGREKKWIGVEPDVVLYNTLINGLCKVGREEEGLNLLEEMKTEKKNKPNTITYNCLIDG 324
Query: 230 WCVLGNAHEAKRVWKDIMASKCRPD 254
+C GN +A+ ++ + + +P+
Sbjct: 325 FCKAGNIDKARELFGLMNEEQIQPN 349
>Medtr4g068800.1 | PPR containing plant-like protein | HC |
chr4:25806656-25804340 | 20130731
Length = 611
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 131 EELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTL 190
E++ ++++EMS N ++S L+ F ++E+ M+ + ++ D+ ++ T+
Sbjct: 261 EKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKMWEEMRKKEIEADVVSYNTI 320
Query: 191 LMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASK 250
+ C+ V AE F+ + + + T+ ++ G+C + + A V+KD++
Sbjct: 321 IGGFCKIGDVGRAEE-FYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKD 379
Query: 251 CRPDPRKGNWAPLLSCFAG 269
RPD + L C+ G
Sbjct: 380 FRPDASTLDMVVRLLCYKG 398
>Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3641843-3643495 | 20130731
Length = 550
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
AP + N +++ LGK+ +E +F EM + + T+++L+ ++ A
Sbjct: 336 APHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQ 395
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+ G+ D+ + +L+ LC+ H++ A L K ++ + + T+N++++G
Sbjct: 396 LVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALV-KKIKDQGIQPSMYTYNILIDGL 454
Query: 231 CVLGNAHEAKRVWKDIM 247
C G A+ V++D++
Sbjct: 455 CKGGRLKNAQDVFQDLL 471
>Medtr4g068800.4 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 131 EELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTL 190
E++ ++++EMS N ++S L+ F ++E+ M+ + ++ D+ ++ T+
Sbjct: 261 EKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKMWEEMRKKEIEADVVSYNTI 320
Query: 191 LMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASK 250
+ C+ V AE F+ + + + T+ ++ G+C + + A V+KD++
Sbjct: 321 IGGFCKIGDVGRAEE-FYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKD 379
Query: 251 CRPDPRKGNWAPLLSCFAG 269
RPD + L C+ G
Sbjct: 380 FRPDASTLDMVVRLLCYKG 398
>Medtr4g068800.3 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 131 EELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTL 190
E++ ++++EMS N ++S L+ F ++E+ M+ + ++ D+ ++ T+
Sbjct: 261 EKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKMWEEMRKKEIEADVVSYNTI 320
Query: 191 LMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASK 250
+ C+ V AE F+ + + + T+ ++ G+C + + A V+KD++
Sbjct: 321 IGGFCKIGDVGRAEE-FYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKD 379
Query: 251 CRPDPRKGNWAPLLSCFAG 269
RPD + L C+ G
Sbjct: 380 FRPDASTLDMVVRLLCYKG 398
>Medtr4g068800.5 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 131 EELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTL 190
E++ ++++EMS N ++S L+ F ++E+ M+ + ++ D+ ++ T+
Sbjct: 261 EKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKMWEEMRKKEIEADVVSYNTI 320
Query: 191 LMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASK 250
+ C+ V AE F+ + + + T+ ++ G+C + + A V+KD++
Sbjct: 321 IGGFCKIGDVGRAEE-FYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKD 379
Query: 251 CRPDPRKGNWAPLLSCFAG 269
RPD + L C+ G
Sbjct: 380 FRPDASTLDMVVRLLCYKG 398
>Medtr4g068800.2 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 131 EELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTL 190
E++ ++++EMS N ++S L+ F ++E+ M+ + ++ D+ ++ T+
Sbjct: 261 EKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKMWEEMRKKEIEADVVSYNTI 320
Query: 191 LMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASK 250
+ C+ V AE F+ + + + T+ ++ G+C + + A V+KD++
Sbjct: 321 IGGFCKIGDVGRAEE-FYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKD 379
Query: 251 CRPDPRKGNWAPLLSCFAG 269
RPD + L C+ G
Sbjct: 380 FRPDASTLDMVVRLLCYKG 398
>Medtr8g102650.1 | PPR containing plant-like protein | HC |
chr8:43222902-43226104 | 20130731
Length = 918
Score = 50.8 bits (120), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 16/159 (10%)
Query: 113 TSRVCNEILDILGKMSRFEELHQVFDEMSHREG-----LVNEDTFSTLLRRFAAAHKVEE 167
T CN +L++L K + +E ++FD+M VN DTF+ ++ K +E
Sbjct: 293 TPATCNVLLEVLLKHDKKKEAWKLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKHGKFDE 352
Query: 168 AISMFYTREQFGLD-------LDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDI 220
A+ F + G +D+ +R ++ C + +A+TLF + L D+
Sbjct: 353 ALDTF---RKVGTKINSKPFIMDVAGYRNIVSRFCEIGMMSEADTLFQESLSK-HLSADV 408
Query: 221 KTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKGN 259
T +++G+ +GN +A RV+ ++ R GN
Sbjct: 409 PTHTAMIDGYLKVGNIDDALRVFNKMVDRGLRVTATFGN 447
>Medtr3g037490.1 | PPR containing plant-like protein | HC |
chr3:13777398-13775665 | 20130731
Length = 577
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 1/143 (0%)
Query: 112 PTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISM 171
P+ R CN +L L K +F+ + V++ + R L T+ LL A +
Sbjct: 86 PSLRECNALLHSLVKSKKFDSVWSVYNNLLSRGLLPTLITYGILLNCCCNQGDFSNARKV 145
Query: 172 FYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWC 231
F Q G+ ++ + TL+ C +++AE F RE + ++ T+ +++G+C
Sbjct: 146 FDEMIQRGIVPNVVVYTTLIRVFCNEGDMDEAER-FLKLMRESGVEPNLYTYVTLIDGYC 204
Query: 232 VLGNAHEAKRVWKDIMASKCRPD 254
GN ++ D++ + PD
Sbjct: 205 KTGNVKRVFEIYSDMLRNGLHPD 227
>Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15046911-15042560 | 20130731
Length = 737
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 143 REGLVNEDTF--STLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHV 200
R GLV ED F + L+ +A K+E+A +F R +F D+ + ++ +
Sbjct: 143 RSGLV-EDVFVGNALVDMYAKCGKMEDANKVF-ERMRFK---DVVTWNAMVTGYSQNGRF 197
Query: 201 EDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKGNW 260
EDA +LF K RE ++ D+ TW+ +++G+ G EA V++ + +CRP N
Sbjct: 198 EDALSLF-GKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRP-----NV 251
Query: 261 APLLSCFAGC 270
L+S + C
Sbjct: 252 VTLMSLLSAC 261
>Medtr8g080940.1 | PPR containing plant-like protein | HC |
chr8:34956434-34962226 | 20130731
Length = 1058
Score = 50.4 bits (119), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Query: 136 VFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLC 195
+F+ M + T++T++ + HK++ A+ MF G+ LD A+ L+ +
Sbjct: 789 IFERMCSNGVAPSIQTYNTMISVYGKYHKLDRAVEMFNKARSLGVPLDEKAYMNLIGYYG 848
Query: 196 RYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+ V +A LF SK +E + ++N+++ + +G HE +++++ + C PD
Sbjct: 849 KAGMVREASQLF-SKMQEEGIKPGKISYNIMIYVYANVGVHHEVEKLFQAMQRQDCLPD 906
>Medtr8g080940.2 | PPR containing plant-like protein | HC |
chr8:34956441-34962226 | 20130731
Length = 856
Score = 50.4 bits (119), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Query: 136 VFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLC 195
+F+ M + T++T++ + HK++ A+ MF G+ LD A+ L+ +
Sbjct: 587 IFERMCSNGVAPSIQTYNTMISVYGKYHKLDRAVEMFNKARSLGVPLDEKAYMNLIGYYG 646
Query: 196 RYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+ V +A LF SK +E + ++N+++ + +G HE +++++ + C PD
Sbjct: 647 KAGMVREASQLF-SKMQEEGIKPGKISYNIMIYVYANVGVHHEVEKLFQAMQRQDCLPD 704
>Medtr1g055295.1 | PPR containing plant-like protein | HC |
chr1:24439721-24443062 | 20130731
Length = 1046
Score = 50.4 bits (119), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 65/132 (49%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
L FNW + T++ N +L ++G+ F + ++ DEM + +T++ L+
Sbjct: 184 GLRVFNWLKLKGGFRHTTQTYNTMLCLVGEGKEFGLVKKLVDEMDECRVQKDVNTWTILV 243
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQL 216
+ A K+ EA+ F ++ G + D+ ++RT++ LC + A + ++ +
Sbjct: 244 SLYGKAKKISEALLAFENMQKCGCEPDVVSYRTIIRLLCSSGKGDIAMEFYKDMVKKDIV 303
Query: 217 HRDIKTWNVILN 228
D++ + +++N
Sbjct: 304 LDDVRLYKMLMN 315
>Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24897577-24898734 | 20130731
Length = 202
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 7/149 (4%)
Query: 109 SYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEA 168
+ AP + ++D L K + ++ + D+M R + +++LL H+V++A
Sbjct: 25 NMAPDIVAYSSLIDGLCKSGKISDVWDLIDDMHDRGQQADIIIYTSLLDALFKNHQVDKA 84
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQL---HRDIKTWNV 225
I++ + G++ D+ + L+ LC+ ++DA+ ++ R+ + H + NV
Sbjct: 85 IALLKKIKDRGIEPDMFTYTMLVDGLCKNGRLKDAQEVY----RDLMVKGYHFNACMHNV 140
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
++NG C G EA V ++ + C PD
Sbjct: 141 MINGLCKEGLFDEALFVLSEMEDNGCTPD 169
>Medtr5g008300.1 | PPR containing plant-like protein | HC |
chr5:1729882-1736023 | 20130731
Length = 1508
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 8/184 (4%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNE- 149
+S W+ AL + + YA +R+ IL +LGK ++ ++F + E ++ +
Sbjct: 207 QSSWQRALELYECLTMQQWYATNARMVATILSVLGKANQEGIAVEIF---AKAESVIADT 263
Query: 150 -DTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRY-KHVEDAETLF 207
++ ++ +A E+ MF + G + D+ +F TL+ + V
Sbjct: 264 VQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSGLAIEL 323
Query: 208 HSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCF 267
+ +F L DI T+N +++ N EA V+ + +++C+PD N ++S +
Sbjct: 324 LDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYN--AMISVY 381
Query: 268 AGCG 271
CG
Sbjct: 382 GRCG 385
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/147 (19%), Positives = 76/147 (51%), Gaps = 5/147 (3%)
Query: 110 YAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLV-NEDTFSTLLRRFAAAHKVEEA 168
+ P ++ N +L + + F+ + ++ +M GL +E+T++TL+ + H+ EE
Sbjct: 960 FKPDLQIFNSVLKLYSSIEEFQNMGVIY-QMIQDAGLAPDEETYNTLITMYCRDHRPEEG 1018
Query: 169 ISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHS-KAREFQLHRDIKTWNVIL 227
+S+ + + GL+ D +R+++ + + + AE LF ++ ++L R +++++
Sbjct: 1019 LSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSF--YHLMM 1076
Query: 228 NGWCVLGNAHEAKRVWKDIMASKCRPD 254
+ G+ +A+ + + + + P+
Sbjct: 1077 KMYRTSGDHQKAENLLEIMKEAGIEPN 1103
>Medtr4g062480.2 | PPR containing plant-like protein | HC |
chr4:23218652-23215388 | 20130731
Length = 457
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED 150
+ +W+ A F+ + P+ N ++ L + ++ ++ ++M + N
Sbjct: 195 KGEWENACKVFDEMLER-KVQPSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRANGV 253
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
T++ L+ + K EEA + + G L F L+ L + +++A LF +
Sbjct: 254 TYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFR-E 312
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
R+ +L D+ T+NV +N C G EA ++ ++ S C P+
Sbjct: 313 MRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPN 356
>Medtr4g062480.3 | PPR containing plant-like protein | HC |
chr4:23218661-23215388 | 20130731
Length = 457
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED 150
+ +W+ A F+ + P+ N ++ L + ++ ++ ++M + N
Sbjct: 195 KGEWENACKVFDEMLER-KVQPSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRANGV 253
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
T++ L+ + K EEA + + G L F L+ L + +++A LF +
Sbjct: 254 TYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFR-E 312
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
R+ +L D+ T+NV +N C G EA ++ ++ S C P+
Sbjct: 313 MRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPN 356
>Medtr4g062480.1 | PPR containing plant-like protein | HC |
chr4:23218638-23215388 | 20130731
Length = 457
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNED 150
+ +W+ A F+ + P+ N ++ L + ++ ++ ++M + N
Sbjct: 195 KGEWENACKVFDEMLER-KVQPSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRANGV 253
Query: 151 TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSK 210
T++ L+ + K EEA + + G L F L+ L + +++A LF +
Sbjct: 254 TYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFR-E 312
Query: 211 AREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
R+ +L D+ T+NV +N C G EA ++ ++ S C P+
Sbjct: 313 MRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPN 356
>Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:9664816-9662405 | 20130731
Length = 691
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Query: 118 NEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQ 177
N + + ++ FE+ ++FDEM R + TFSTL+R A +A+ +F
Sbjct: 153 NVLFKLFREIKDFEQAEKLFDEMLQRGVKPDVVTFSTLIRCAAVCSFPHKAVELFERMPD 212
Query: 178 FGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAH 237
FG + D + +++ R +V+ A L+ S E + R + ++ ++ + +LGN
Sbjct: 213 FGCEPDYNVSSSMIYVYARTGNVDMALKLYDSAKNEKWVIRPV-AFSALIKMYGILGNYD 271
Query: 238 EAKRVWKDIMASKCRPD 254
V+ D+ RP+
Sbjct: 272 GCLSVYNDMKVLGVRPN 288
>Medtr3g083680.1 | PPR containing plant-like protein | HC |
chr3:37762257-37764734 | 20130731
Length = 684
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 6/167 (3%)
Query: 89 RHRSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVN 148
R D+ A+ FN + + P CN ++ + GK F E + EM R+ VN
Sbjct: 241 RKLCDYSKAISIFNALKGSGNIVPDLIACNMMISVYGKAKLFREARLLLQEM--RDNGVN 298
Query: 149 EDT--FSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETL 206
T +STLL + K EA+S+F + +DL ++ + + +++A+
Sbjct: 299 PSTASYSTLLAIYVDNQKFVEAVSLFSEMNEVECPIDLTTCNIMIDVYGQLQMIKEADCF 358
Query: 207 FHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRP 253
F R+ + ++ ++N +L + G EA ++ +M K P
Sbjct: 359 FWG-MRKMGIEPNVVSYNTVLRVYGEAGLFGEAVHLF-SLMQMKGVP 403
>Medtr0026s0200.1 | PPR containing plant-like protein | HC |
scaffold0026:95081-98739 | 20130731
Length = 778
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 131 EELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTL 190
E++ ++++EMS N ++S L+ F ++E+ M+ + ++ D+ ++ T+
Sbjct: 261 EKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKMWEKMRKKEIEADVVSYNTI 320
Query: 191 LMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASK 250
+ C+ V AE F+ + + + T+ ++ G+C + + A V+KD++
Sbjct: 321 IGGFCKIGDVGRAEE-FYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKD 379
Query: 251 CRPDPRKGNWAPLLSCFAG 269
RPD + L C G
Sbjct: 380 FRPDASTLDMVVRLLCNKG 398
>Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29945975-29946805 | 20130731
Length = 262
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 126 KMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLD 185
K+ +E +F+EM ++ N T+++L+ + ++ A+ + G ++
Sbjct: 107 KIKMVDEAMNLFEEMHCKQIFPNVVTYNSLINGLCRSGRISYALELVDEMHDRGQPPNII 166
Query: 186 AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD 245
+ ++L LC+ V+ A +F +K ++ + + T+N+++ G C +G +A++V++
Sbjct: 167 TYNSILDVLCKNYDVDKA-IVFLTKLKDQDIQPSMYTYNILIYGLCKVGRLKDARKVFEY 225
Query: 246 IMASKCRPD 254
++ C D
Sbjct: 226 LLVKGCSLD 234
>Medtr8g107230.1 | PPR containing plant-like protein | HC |
chr8:45314957-45316928 | 20130731
Length = 554
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 95 KPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGL-VNEDTFS 153
+ A +FFNWAS+ + +LDI G+ R + VF++M H +G+ ++ T++
Sbjct: 81 EKAWLFFNWASRLKGFKHDQFTYTTMLDIFGEAGRISSMKHVFNQM-HEKGIKIDSVTYT 139
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDL-DLDAFRTLLMWLCRYKHVEDAETLFHSKAR 212
+++ + + V+EAI+++ + G + ++ + L V++A ++
Sbjct: 140 SMMHWLSTSGNVDEAIALWDEMKSKGCCYPTVVSYTAFIKILFDNHRVKEATAIYKE--- 196
Query: 213 EFQLHR----DIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCFA 268
LH + T+ V+++ G EA +++ + + PD N + C
Sbjct: 197 --MLHNGCVPNCYTYTVLMDHLIASGKCKEALEIFQKMQEAGVEPDKAACN-ILIDKCSK 253
Query: 269 GCG 271
CG
Sbjct: 254 VCG 256
>Medtr5g031740.1 | PPR containing plant-like protein | HC |
chr5:13615116-13619806 | 20130731
Length = 894
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 3/148 (2%)
Query: 108 DSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEE 167
D + P R +D L KM + E+ HQVF+ + + NE ++ L+ + A K +
Sbjct: 464 DGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSD 523
Query: 168 AISMFYTREQF-GLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVI 226
A + + R F G + F LL L + VEDA +L + F + T+ ++
Sbjct: 524 A-HLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGK-FDAKPTVHTYTIL 581
Query: 227 LNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+ + A +++S C+P+
Sbjct: 582 IEEILRESDFDRANMFLDQMISSGCQPN 609
>Medtr5g094770.1 | PPR containing plant-like protein | HC |
chr5:41420061-41421993 | 20130731
Length = 577
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Query: 111 APTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAIS 170
P N ++ K+ F E +++D+M R N ++ST++ K +EA+S
Sbjct: 338 VPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALS 397
Query: 171 MFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
+F+ + G+ DL ++ +L+ LC+ + A L + + L + ++ ++
Sbjct: 398 LFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQ-GLEPSVSSFTPLIKCL 456
Query: 231 CVLGNAHEAKRVWKDI 246
C +G+ A R+ KD+
Sbjct: 457 CKVGDTEGAMRLLKDM 472
>Medtr6g080130.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30127216-30126608 | 20130731
Length = 202
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 126 KMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLD 185
K+ R E +F+EM ++ + + T+S+L+ F + K+ A+++ G D+
Sbjct: 7 KIKRVGEAINLFEEMQCKKIIPDVVTYSSLIDGFCKSEKISHALNLVNEMHDRGQPPDII 66
Query: 186 AFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKD 245
+ ++L LC+ V+ A L +K + + + T+ ++++G C +A+ ++KD
Sbjct: 67 IYNSILDALCKNHQVDKAIALL-TKFKNQGIQPSVYTYTILIDGLCKGERLEDARNIFKD 125
Query: 246 IMA 248
++
Sbjct: 126 LLV 128
>Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:31000531-30999809 | 20130731
Length = 240
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 120 ILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFG 179
I+D L K + ++ EM + ++ T++ L+ F+A K+ +AI +F
Sbjct: 5 IIDSLCKYKLVNDAFDLYSEMVAKRIGLDVFTYNALISGFSAVSKLNDAIGLFNKMTAEN 64
Query: 180 LDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIK----TWNVILNGWCVLGN 235
++ D+ F L+ C+ V++A+ + + DIK T++ +++G+C++
Sbjct: 65 INPDVYTFNILVDGFCKDGRVKEAKNVL-----AMMIKDDIKPRVVTYSSLMDGYCLINE 119
Query: 236 AHEAKRVWKDIMASK 250
++AK ++ D MA++
Sbjct: 120 VNKAKEIF-DSMAAR 133
>Medtr7g090340.1 | PPR containing plant-like protein | HC |
chr7:35534069-35535796 | 20130731
Length = 521
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 91 RSDWKPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQV-----------FDE 139
++D +L FFNW + + T + +L IL K F+ + F+
Sbjct: 79 QNDAVLSLKFFNWVQTHNPNSHTLHTHSFLLHILTKNRNFKTAQSIFSKIITTNSNLFES 138
Query: 140 MSHREGLVNED--TFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDL---DAFRTLLMWL 194
+ H L N F TL + FA +K+ A F +++G + +AF + +++L
Sbjct: 139 LLHSYTLCNSSPLVFDTLFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYL 198
Query: 195 CRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDI 246
R + V F+ + R ++ ++ T N++++ +C LG ++A V + +
Sbjct: 199 KRPELVVS----FYRQMRRNRISPNVYTINMVVSAYCKLGELNKASEVLEKM 246
>Medtr4g133740.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:55951491-55948959 | 20130731
Length = 706
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 67/148 (45%)
Query: 106 KADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKV 165
KA P V N +LD +G+ R + ++ EM + + L N T+++LL + A
Sbjct: 313 KALGVKPNLVVYNTLLDAMGRAKRPWQARTIYKEMINNDILPNRATYASLLHAYGRARFC 372
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
E+A+ ++ + +DL+ + +LL + + A +F D T++
Sbjct: 373 EDALVVYREMREKEMDLNTHLYNSLLAMCADVGYTDLAFEIFEDMKSSDTCSPDSWTFSS 432
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRP 253
++ + G EA+R+ +++ S P
Sbjct: 433 LITIYSCSGRVSEAERMMNEMIESGFEP 460
>Medtr3g094280.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:43095820-43097298 | 20130731
Length = 391
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 95 KPALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDT-FS 153
K AL F W K D ++ +++ K R+ E + +M EG+V + ++
Sbjct: 111 KEALSFV-WLIKKDGFSLNRNSYTSLINGFFKARRYREARVWYTKM-FEEGIVPDVVLYA 168
Query: 154 TLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKARE 213
++R + +V EA M Q GL D + ++ LC V +A+ LF+ + +
Sbjct: 169 IMIRGLSEEGRVGEAGKMLEEMNQIGLTHDAYCYNVVIQGLCDVGMVVEAKELFN-RMEK 227
Query: 214 FQLHRDIKTWNVILNGWCVLGNAHEAKRVW 243
I T+N ++NG C N EA ++
Sbjct: 228 LGCELSIVTFNALINGLCKAKNLEEAMNLF 257
>Medtr4g068360.1 | PPR containing plant-like protein | HC |
chr4:25633167-25630902 | 20130731
Length = 624
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Query: 135 QVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWL 194
Q+ EM + + + +E TF+TL++ + KVEEA + ++ G+ D ++ TL+
Sbjct: 483 QLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGY 542
Query: 195 CRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+ ++DA +F + + T+N ++ G+ +G A A+ + +++ + PD
Sbjct: 543 SKRGDMKDALEVF-DEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPD 601
>Medtr8g103480.2 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 68/158 (43%), Gaps = 1/158 (0%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
A+ FN ++ + + PT ++ L ++ RF + + ++ + F+ ++
Sbjct: 62 AVTIFNSLTE-EGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMI 120
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQL 216
F+ + KV EA+ +F ++ G F TL+ +A L ++ +
Sbjct: 121 NAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNV 180
Query: 217 HRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+ +T+N+++ WC EA V ++ S +PD
Sbjct: 181 KPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPD 218
>Medtr8g103480.1 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 68/158 (43%), Gaps = 1/158 (0%)
Query: 97 ALVFFNWASKADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLL 156
A+ FN ++ + + PT ++ L ++ RF + + ++ + F+ ++
Sbjct: 62 AVTIFNSLTE-EGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMI 120
Query: 157 RRFAAAHKVEEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQL 216
F+ + KV EA+ +F ++ G F TL+ +A L ++ +
Sbjct: 121 NAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNV 180
Query: 217 HRDIKTWNVILNGWCVLGNAHEAKRVWKDIMASKCRPD 254
+ +T+N+++ WC EA V ++ S +PD
Sbjct: 181 KPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPD 218
>Medtr7g405940.1 | PPR containing plant-like protein | HC |
chr7:313415-311451 | 20130731
Length = 654
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Query: 107 ADSYAPTSRVCNEILDILGKMSRFEELHQVFDEMSHREGLV-NEDTFSTLLRRFAAAHKV 165
++ ++P N I++ L K R +E +++ ++ + GL + T++ L+ +
Sbjct: 367 SEGFSPNVCTYNAIVNGLCKRGRVQEAYKMLED-GFQNGLKPDRFTYNILMSEHCKQANI 425
Query: 166 EEAISMFYTREQFGLDLDLDAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNV 225
+A+ +F + G+ D+ ++ TL+ CR ++++E F R + + +T+
Sbjct: 426 RQALVLFNKMVKSGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTN-RTYTS 484
Query: 226 ILNGWCVLGNAHEAKRVWKDIMASKCRPDP 255
++ G+C GN A + + + C PD
Sbjct: 485 MICGYCREGNLTLAMKFFHRLSDHGCAPDS 514
>Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:26701564-26699663 | 20130731
Length = 633
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Query: 126 KMSRFEELHQVFDEMSHREGLV-NEDTFSTLLRRFAAAHKVEEAISMFYTREQFGLDLDL 184
K+ R + +VFDEM REG+V N T+++L+ A +V A + T + GL D+
Sbjct: 342 KVGRVRDAVRVFDEMC-REGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDI 400
Query: 185 DAFRTLLMWLCRYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGWCVLGNAHEAKRVWK 244
LL LC+ K ++ A LF ++ E L D+ ++ ++++G C EA + +
Sbjct: 401 VTCCILLDGLCKSKRLDQAILLF-NQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLR 459
Query: 245 DIMASKCRP 253
D+ P
Sbjct: 460 DMHLKNLVP 468
>Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:13924435-13921068 | 20130731
Length = 598
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 73/161 (45%), Gaps = 30/161 (18%)
Query: 117 CNEILDILGKMSRFEELHQVFDEMSHREGLVNEDTFSTLLRRFAAAHKVEEAISMFYTRE 176
CN + L + + E +VFDEMS R+ + ++T++ + + EA +F
Sbjct: 4 CNYFISKLCREGQINEARKVFDEMSERDSCL----WTTMISGYIKCGLINEARKLFDR-- 57
Query: 177 QFGLDLDLDAFRTLLMWLC------RYKHVEDAETLFHSKAREFQLHRDIKTWNVILNGW 230
LDA +++++W + +E+AE LF+ R++ +WN +++G+
Sbjct: 58 -------LDAEKSVIVWTAMVSGYIKINRIEEAERLFNEMPV-----RNVVSWNTMIDGY 105
Query: 231 CVLGNAHEAKRVWKDIMASKCRPDPRKGNWAPLLSCFAGCG 271
G EA ++ + P+ +W +++ A CG
Sbjct: 106 ARNGRTQEAMDLFGRM------PERNVVSWNTVMTALAHCG 140