Miyakogusa Predicted Gene

Lj6g3v1690540.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1690540.2 tr|E5GCA9|E5GCA9_CUCME Protein SEY1 OS=Cucumis
melo subsp. melo PE=4 SV=1,58.23,9e-16,RHD3,Root hair defective 3
GTP-binding; no description,NULL; P-loop containing nucleoside
triphospha,CUFF.59765.2
         (342 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g029340.1 | ROOT HAIR defective 3 GTP-binding family prote...   625   e-179
Medtr8g016310.1 | ROOT HAIR defective 3 GTP-binding family prote...   576   e-164
Medtr2g029300.1 | ROOT HAIR defective 3 GTP-binding protein | HC...   500   e-142

>Medtr2g029340.1 | ROOT HAIR defective 3 GTP-binding family protein
           | HC | chr2:10952430-10963961 | 20130731
          Length = 833

 Score =  625 bits (1613), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 305/339 (89%), Positives = 321/339 (94%), Gaps = 1/339 (0%)

Query: 4   IDDDCHATQLIDGDGTFNVAGLDTFIKTSSLAACGLSYAVVAIMGPQSSGKSTLMNHLFH 63
           +DD C ATQLIDGDG FN+ GLD FIKTS++A  GLSYAVVAIMGPQSSGKSTLMNHLFH
Sbjct: 5   VDDSC-ATQLIDGDGVFNLTGLDNFIKTSNMANTGLSYAVVAIMGPQSSGKSTLMNHLFH 63

Query: 64  TSFREMDAFRGRSQTTKGIWIAKCVGIEPCTVAMDLEGTDGRERGEDDTAFEKQSALFAL 123
           TSFREMDAFRGRSQTTKGIWIAKC GIEPCT+AMDLEGTDGRERGEDDTAFEKQSALFAL
Sbjct: 64  TSFREMDAFRGRSQTTKGIWIAKCTGIEPCTIAMDLEGTDGRERGEDDTAFEKQSALFAL 123

Query: 124 AVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKSKTPMENLE 183
           AVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDK+KTP+ENLE
Sbjct: 124 AVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTKTPLENLE 183

Query: 184 PILREDIQKIWDAVSKPQAHKNTPLSEFFNVEVTGLSSYEDKEDKFKEEVAQLRQRFFHS 243
           PILREDIQKIWD V KPQAH +TPLSEFFNVEVT LSSYEDKE+KFKEEVAQLRQRF+HS
Sbjct: 184 PILREDIQKIWDGVPKPQAHLHTPLSEFFNVEVTALSSYEDKEEKFKEEVAQLRQRFYHS 243

Query: 244 VAPGGLAGDRRGVVPASAFSISAQQIWNVIRENKDLDLPAHKVMVATVRCEEIANEKFSH 303
           +APGGLAGDRRGVVPASAFS+SAQ IW VIRENKDLDLPAHKVMVATVRCEEIA EK S 
Sbjct: 244 IAPGGLAGDRRGVVPASAFSLSAQHIWKVIRENKDLDLPAHKVMVATVRCEEIAYEKLSQ 303

Query: 304 LRTDEGWLELEEAVESGPVRGFGEKLSSIIDTYLSQYDE 342
           LR+D+GWLELEEAV+SGPV+GFGEKLSSIIDTYLS YDE
Sbjct: 304 LRSDKGWLELEEAVQSGPVQGFGEKLSSIIDTYLSLYDE 342


>Medtr8g016310.1 | ROOT HAIR defective 3 GTP-binding family protein
           | HC | chr8:5482218-5490686 | 20130731
          Length = 819

 Score =  576 bits (1484), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 263/336 (78%), Positives = 303/336 (90%)

Query: 6   DDCHATQLIDGDGTFNVAGLDTFIKTSSLAACGLSYAVVAIMGPQSSGKSTLMNHLFHTS 65
           + C +TQLIDGDG FN +G++ F+K   L  CGLSYAVV+IMGPQSSGKSTL+N+LFHT+
Sbjct: 13  ETCCSTQLIDGDGLFNASGIEKFMKEVKLGECGLSYAVVSIMGPQSSGKSTLLNNLFHTN 72

Query: 66  FREMDAFRGRSQTTKGIWIAKCVGIEPCTVAMDLEGTDGRERGEDDTAFEKQSALFALAV 125
           FREMDAF+GRSQTTKGIW+A+C GIEPCT+ MDLEGTDGRERGEDDTAFEKQSALFALAV
Sbjct: 73  FREMDAFKGRSQTTKGIWMARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFALAV 132

Query: 126 SDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKSKTPMENLEPI 185
           SDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDK++TP+ENLEP+
Sbjct: 133 SDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTRTPLENLEPV 192

Query: 186 LREDIQKIWDAVSKPQAHKNTPLSEFFNVEVTGLSSYEDKEDKFKEEVAQLRQRFFHSVA 245
           LREDIQKIWD+V KPQAHK+TPLSEFFNVEV  LSSYE+KE++F+E+VA LRQRF  S+A
Sbjct: 193 LREDIQKIWDSVPKPQAHKDTPLSEFFNVEVVALSSYEEKEEQFREQVASLRQRFNQSIA 252

Query: 246 PGGLAGDRRGVVPASAFSISAQQIWNVIRENKDLDLPAHKVMVATVRCEEIANEKFSHLR 305
           PGGLAGDRRGVVPAS FS SAQ+IW VI+ENKDLDLPAHKVMVATVRCEEIANEK++   
Sbjct: 253 PGGLAGDRRGVVPASGFSFSAQEIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYAAFV 312

Query: 306 TDEGWLELEEAVESGPVRGFGEKLSSIIDTYLSQYD 341
            +E W +LEE V+S P+ GFG+K++S++   LS+YD
Sbjct: 313 ANEEWCQLEETVQSDPIPGFGKKINSLLHACLSEYD 348


>Medtr2g029300.1 | ROOT HAIR defective 3 GTP-binding protein | HC |
           chr2:10930336-10936870 | 20130731
          Length = 697

 Score =  500 bits (1287), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 247/340 (72%), Positives = 291/340 (85%), Gaps = 3/340 (0%)

Query: 4   IDDD-CHATQLIDGDGTFNVAGLDTFIKTSSLAACGLSYAVVAIMGPQSSGKSTLMNHLF 62
           +DD   +  QLIDG+G FNV GLD  IKTS +A  GL Y VV+IMGPQSSGKS+L+N++F
Sbjct: 7   VDDSFANQVQLIDGEGVFNVTGLDNLIKTSDMANTGLDYVVVSIMGPQSSGKSSLLNNIF 66

Query: 63  HTSFREMDAFRGRSQTTKGIWIAKCVGIEPCTVAMDLEGTDGRERGEDDTAFEKQSALFA 122
            T F EM+A   RSQTTKGIWIAK  GI+PCT A+D+EGTDGRERGEDDTAFEKQSALFA
Sbjct: 67  CTKFEEMNALTCRSQTTKGIWIAK-TGIKPCTFALDIEGTDGRERGEDDTAFEKQSALFA 125

Query: 123 LAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKSKTPMENL 182
           LA+S+IVLIN+WCHD+GREQAA+KPLL+TVFQVM+RLFSPRK TL+FV+RDK+KTP++ L
Sbjct: 126 LALSNIVLINLWCHDVGREQAASKPLLRTVFQVMLRLFSPRKITLIFVLRDKTKTPLKIL 185

Query: 183 EPILREDIQKIWDAVSKPQAHKNTPLSEFFNVEVTGLSSYEDKEDKFKEEVAQLRQRFFH 242
           EPILREDIQKIWDA+ KPQAH +TPL +FFNVEVT LSSYE +E++FKEEV++LR+  +H
Sbjct: 186 EPILREDIQKIWDAIPKPQAHAHTPLHDFFNVEVTALSSYETQEEEFKEEVSELREHLYH 245

Query: 243 SVAPGGLAGDRRGVVPASAFSISAQQIWNVIRENKDLDLPAHKVMVATVRCEEIANEKFS 302
           S+A   LAGDRRG VPASAFSISA  IW VIR+NKDLDLPAHKVMVATVRCE IA EK  
Sbjct: 246 SIA-SRLAGDRRGAVPASAFSISAHHIWEVIRDNKDLDLPAHKVMVATVRCEAIAKEKLD 304

Query: 303 HLRTDEGWLELEEAVESGPVRGFGEKLSSIIDTYLSQYDE 342
           HLR+D+G LEL++A +SG  +GFGEKLSSII TY S+YDE
Sbjct: 305 HLRSDKGLLELKKAAQSGSAQGFGEKLSSIISTYRSRYDE 344