Miyakogusa Predicted Gene

Lj6g3v1629750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1629750.1 Non Characterized Hit- tr|F6HLZ3|F6HLZ3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,37.4,0.00000000002,TPR_1,Tetratricopeptide TPR-1; GLL1384
PROTEIN,NULL; TETRATRICOPEPTIDE REPEAT PROTEIN, TPR,NULL; no
,CUFF.59719.1
         (573 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g030510.1 | TPR repeat protein, putative | HC | chr2:11504...   611   e-175
Medtr8g075260.1 | TPR superfamily protein | HC | chr8:31818432-3...   290   2e-78
Medtr7g059010.2 | male sterility MS5 family protein | HC | chr7:...   265   1e-70
Medtr7g059010.1 | male sterility MS5 family protein | HC | chr7:...   264   2e-70
Medtr7g058930.1 | male sterility MS5 family protein | HC | chr7:...   259   6e-69

>Medtr2g030510.1 | TPR repeat protein, putative | HC |
           chr2:11504409-11508674 | 20130731
          Length = 617

 Score =  611 bits (1575), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 368/635 (57%), Positives = 423/635 (66%), Gaps = 91/635 (14%)

Query: 1   MPFERNSPARCFMTPPPPRLSSWRSTPSRSPIMMPLSERKRS---SPNKDDPYHVIHKVP 57
           M FERNSPARC+MTPP    SSW+S P RSP + P SERK+S   S +KDD +HVIHKVP
Sbjct: 1   MTFERNSPARCYMTPPS-SSSSWKSRPVRSPTV-PFSERKKSPAASVSKDDLFHVIHKVP 58

Query: 58  AGDSPYVKAKQVQLVDKDPGKAISLFWAAINAGDRVESALKDMALVMKQLNRSDEAIEAI 117
           +GDSPYVKAKQVQLVDKDPGKAISLFWAAINAGDRVESALKDMALVMKQLNRSDEAIEAI
Sbjct: 59  SGDSPYVKAKQVQLVDKDPGKAISLFWAAINAGDRVESALKDMALVMKQLNRSDEAIEAI 118

Query: 118 KSFRHLCPPDSQESLDNILVELYKRSGRVDEEISMLHHKLKQIEDGVTFVGRTTKQARSQ 177
           KSFRHLCP DSQESLDNILVELYKRSGRVDEEI MLH KLKQIEDG+T+VGRTTK ARSQ
Sbjct: 119 KSFRHLCPSDSQESLDNILVELYKRSGRVDEEIGMLHQKLKQIEDGMTYVGRTTKHARSQ 178

Query: 178 GKKIHVTAEQEISRILGNLAWAYLQKGDYKAAEEHYRKALSFEVDRNKQCNLAICLMQTN 237
           GKKI ++AEQEISRILGNLAWAYLQKGDYK AEEHYRKALSFEVDRNKQCNLAICLMQ N
Sbjct: 179 GKKIQISAEQEISRILGNLAWAYLQKGDYKTAEEHYRKALSFEVDRNKQCNLAICLMQMN 238

Query: 238 RITEAKFLLQAVTTASKHRKMDDSCAKSFERASQMLMDMEXXX----------------- 280
           ++TEA+FLLQAVT A+K+RKMDDS  KS+ERA+QML +ME                    
Sbjct: 239 KVTEARFLLQAVTAATKNRKMDDSFVKSYERATQMLQEMESTAPSVDSVKDKGDNKFNET 298

Query: 281 -----------XXXXXXXXXXGKSSDMVQSRTQ-NWSVTSEGE---VSNARRRLYESPEP 325
                                GK++  V+SRT+ N S+TS+ +    S+ARRRLYES +P
Sbjct: 299 ERFSGRNMSSPYSTPNLESSNGKTTGTVKSRTENNRSLTSDAKDSHHSHARRRLYESLDP 358

Query: 326 ARRDLKV-PYTNTKKCSWGFNNGPQRETWGDVHSDPKPSF-GIP-----------SKQNN 372
           A+ D KV PYT  K+ SWGFN+          HSD KPSF   P           S QN 
Sbjct: 359 AKSDPKVPPYTKPKRPSWGFNS----------HSDSKPSFVSYPNEKAPYIIKPNSTQNG 408

Query: 373 LSLPANGKWNAR--------------TMVKREDKTAIGSGLYTYS-NTETDRKFKEDKFA 417
            S      W  R              T VK+ +KT + S    Y  NTE   KF ++   
Sbjct: 409 FSPRTATNWRTRTPEGDAAIVKYGPTTTVKQGNKTTVFSSGSIYPLNTEAAMKFTKN--- 465

Query: 418 VESNDMVVNGANQFASSIGT-DQRSIKPVEKKSWADIVEEEQNEGHD--FFGGYTRFDGQ 474
              N+      N+FA+S+ T DQ   K + KKSWAD+VEEEQ       F+ GYT FD  
Sbjct: 466 --DNNNKFTVTNEFAASVDTKDQNQDKKLAKKSWADMVEEEQQSEEYELFYKGYTNFD-- 521

Query: 475 EGAQVFNKENENSNIVFQRPWPLS--ETKCISKKLESMDLKDGHHGSGTV-TLSRKPAVR 531
             AQVF  ENENSNIV+Q P   S  ET+ +++ LE M+LKDG++ +    T  R P VR
Sbjct: 522 --AQVFQNENENSNIVYQPPSRRSHYETESLNQNLEFMNLKDGYNAAPVNDTWLRNPTVR 579

Query: 532 RSLCFNPELAKERDSSLSEEKKPPRNNRLQVFKDI 566
           RSL  N E+  ERD    EEK+  R  RLQVF+DI
Sbjct: 580 RSLFTNAEMTNERDVFSGEEKR-TRRARLQVFQDI 613


>Medtr8g075260.1 | TPR superfamily protein | HC |
           chr8:31818432-31815891 | 20130731
          Length = 479

 Score =  290 bits (743), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 149/264 (56%), Positives = 186/264 (70%), Gaps = 11/264 (4%)

Query: 17  PPRLSSWRSTPSR--SPIMMPLSERKRSSPNKDDPYHVIHKVPAGDSPYVKAKQVQLVDK 74
           PP     +S PS    P+ +P   R RS     + +H+ HKVP GD+PYV+AK VQLVDK
Sbjct: 9   PPGFRPSKSAPSSPAKPLGVP---RTRS-----ESFHITHKVPIGDTPYVRAKNVQLVDK 60

Query: 75  DPGKAISLFWAAINAGDRVESALKDMALVMKQLNRSDEAIEAIKSFRHLCPPDSQESLDN 134
           DP +AI LFWAAINAGDRV+SALKDMA+VMKQ NR++EAIEAIKS R  C   +QESLDN
Sbjct: 61  DPERAIPLFWAAINAGDRVDSALKDMAIVMKQQNRAEEAIEAIKSLRSRCSDQAQESLDN 120

Query: 135 ILVELYKRSGRVDEEISMLHHKLKQIEDGVTFVGRTTKQARSQGKKIHVTAEQEISRILG 194
           IL++LYKR GR+D++I++L HKL  I+ G+ F G+ TK ARSQGKK  V+ EQE +R+LG
Sbjct: 121 ILLDLYKRCGRLDDQIALLRHKLYLIQQGLAFNGKRTKTARSQGKKFQVSVEQEATRLLG 180

Query: 195 NLAWAYLQKGDYKAAEEHYRKALSFEVDRNKQCNLAICLMQTNRITEAKFLLQAVTTA-S 253
           NL WA +Q+ +Y  AEE YR+AL    D NK CNL ICLM+  RI EAK  L  V  A +
Sbjct: 181 NLGWALMQQNNYIEAEEAYRRALCLAPDNNKMCNLGICLMKQGRIAEAKETLHRVKPAVT 240

Query: 254 KHRKMDDSCAKSFERASQMLMDME 277
              +  DS  K++ERA QML D+E
Sbjct: 241 DGPRGSDSHLKAYERAQQMLKDLE 264


>Medtr7g059010.2 | male sterility MS5 family protein | HC |
           chr7:21290300-21287093 | 20130731
          Length = 295

 Score =  265 bits (676), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 135/238 (56%), Positives = 172/238 (72%), Gaps = 3/238 (1%)

Query: 39  RKRSSPNKDDPYHVIHKVPAGDSPYVKAKQVQLVDKDPGKAISLFWAAINAGDRVESALK 98
           +K S   K+D YHVIHKVP GD+PYVKAK  QLVDKDP  AI  FW AINAGD+V+SALK
Sbjct: 8   KKSSKGKKEDLYHVIHKVPYGDTPYVKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALK 67

Query: 99  DMALVMKQLNRSDEAIEAIKSFRHLCPPDSQESLDNILVELYKRSGRVDEEISMLHHKLK 158
           DMA+VMKQL+R++EAIEAIKSFR LC   SQESLDN+L++LYK+ GRV+E+I +L  KL+
Sbjct: 68  DMAVVMKQLDRAEEAIEAIKSFRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLKRKLR 127

Query: 159 QIEDGVTFVGRTTKQARSQGKKIHVTAEQEISRILGNLAWAYLQKGDYKAAEEHYRKALS 218
            I  G  F GRTTK ARS GKK  V+ +QE +R+LGNL WAY+QK +Y  AE  ++KA  
Sbjct: 128 LIYQGEAFNGRTTKTARSHGKKFQVSIKQETARLLGNLGWAYMQKTNYMMAEVVFKKAQM 187

Query: 219 FEVDRNKQCNLAICLMQTNRITEAKFLLQAVTTASKHRKMDDSCAKSFERASQMLMDM 276
            + D NK  NLA+CLM+ +R  EA  +L+ V    K    D+   KS  RA ++L+++
Sbjct: 188 IDADANKALNLALCLMRQSRYEEAYLILEQVLQG-KLPGSDE--IKSRNRAEELLVEL 242


>Medtr7g059010.1 | male sterility MS5 family protein | HC |
           chr7:21290335-21286538 | 20130731
          Length = 404

 Score =  264 bits (675), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 135/238 (56%), Positives = 172/238 (72%), Gaps = 3/238 (1%)

Query: 39  RKRSSPNKDDPYHVIHKVPAGDSPYVKAKQVQLVDKDPGKAISLFWAAINAGDRVESALK 98
           +K S   K+D YHVIHKVP GD+PYVKAK  QLVDKDP  AI  FW AINAGD+V+SALK
Sbjct: 25  KKSSKGKKEDLYHVIHKVPYGDTPYVKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALK 84

Query: 99  DMALVMKQLNRSDEAIEAIKSFRHLCPPDSQESLDNILVELYKRSGRVDEEISMLHHKLK 158
           DMA+VMKQL+R++EAIEAIKSFR LC   SQESLDN+L++LYK+ GRV+E+I +L  KL+
Sbjct: 85  DMAVVMKQLDRAEEAIEAIKSFRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLKRKLR 144

Query: 159 QIEDGVTFVGRTTKQARSQGKKIHVTAEQEISRILGNLAWAYLQKGDYKAAEEHYRKALS 218
            I  G  F GRTTK ARS GKK  V+ +QE +R+LGNL WAY+QK +Y  AE  ++KA  
Sbjct: 145 LIYQGEAFNGRTTKTARSHGKKFQVSIKQETARLLGNLGWAYMQKTNYMMAEVVFKKAQM 204

Query: 219 FEVDRNKQCNLAICLMQTNRITEAKFLLQAVTTASKHRKMDDSCAKSFERASQMLMDM 276
            + D NK  NLA+CLM+ +R  EA  +L+ V    K    D+   KS  RA ++L+++
Sbjct: 205 IDADANKALNLALCLMRQSRYEEAYLILEQVLQG-KLPGSDE--IKSRNRAEELLVEL 259


>Medtr7g058930.1 | male sterility MS5 family protein | HC |
           chr7:21253696-21249411 | 20130731
          Length = 300

 Score =  259 bits (661), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 124/208 (59%), Positives = 155/208 (74%)

Query: 42  SSPNKDDPYHVIHKVPAGDSPYVKAKQVQLVDKDPGKAISLFWAAINAGDRVESALKDMA 101
           S   K+D YHV++KVP GDSPYV+AK  QLV+KDP  AI LFW AINAGD+V+SALKDMA
Sbjct: 16  SKGKKEDIYHVLYKVPYGDSPYVRAKHAQLVEKDPEAAIVLFWKAINAGDKVDSALKDMA 75

Query: 102 LVMKQLNRSDEAIEAIKSFRHLCPPDSQESLDNILVELYKRSGRVDEEISMLHHKLKQIE 161
           +VMKQL+RS+EAIEAI SFR LC   SQESLDN+L++LYK+ G++DEEI +L  KLK I 
Sbjct: 76  VVMKQLDRSEEAIEAISSFRGLCSKQSQESLDNVLIDLYKKCGKIDEEIDLLKQKLKLIY 135

Query: 162 DGVTFVGRTTKQARSQGKKIHVTAEQEISRILGNLAWAYLQKGDYKAAEEHYRKALSFEV 221
            G  F G+ TK ARS GKK  V+ +QE SR+LGNL WAY+QK +Y  AE  YRKA   + 
Sbjct: 136 QGEAFNGKLTKTARSHGKKFQVSIKQETSRLLGNLGWAYMQKMNYVMAEAVYRKAQMIDP 195

Query: 222 DRNKQCNLAICLMQTNRITEAKFLLQAV 249
           D NK CNL +CL++  R  EA+ ++  +
Sbjct: 196 DCNKACNLGLCLIRQARYEEAQLIIDDI 223