Miyakogusa Predicted Gene

Lj6g3v1629740.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1629740.1 tr|I3SWQ6|I3SWQ6_LOTJA Histidinol dehydrogenase,
chloroplastic OS=Lotus japonicus PE=2
SV=1,98.95,0,HISOL_DEHYDROGENASE,Histidinol dehydrogenase, conserved
site; HisD,Histidinol dehydrogenase; ALDH-li,CUFF.59722.1
         (474 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g030520.1 | histidinol dehydrogenase | HC | chr2:11509415-...   832   0.0  

>Medtr2g030520.1 | histidinol dehydrogenase | HC |
           chr2:11509415-11516103 | 20130731
          Length = 478

 Score =  832 bits (2150), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/481 (84%), Positives = 431/481 (89%), Gaps = 10/481 (2%)

Query: 1   MESALTASNWN-RCFLHPLNXXXXXXXPFSATAFRVRCSI------KSYRXXXXXXXXXX 53
           M+SALT  N N +C+    N         +   +R RCSI      K+Y           
Sbjct: 1   MKSALTTCNINWKCYQ---NHHRTSFSVTNTINYRTRCSISMANPIKTYHLSNLTQTELL 57

Query: 54  XXKTRPRIDFSSIFSVVNPIVDDVHQRGDAAVKEYTSRFDKVELDKIVEVVSELPDPVLD 113
             K+RPRIDFSS+F +VNPIVDDVH  GDAAVK+YTS+FDKV+L+ IVE+VS+LPDPVLD
Sbjct: 58  SLKSRPRIDFSSVFDIVNPIVDDVHAHGDAAVKQYTSKFDKVDLENIVELVSDLPDPVLD 117

Query: 114 PPVKEAFDVAYSNIYAFHAAQKSTEKSVENMKGVQCKRVARSINSVGLYVPGGTAVLPST 173
           P +KEAFDVAYSNIYAFHAAQKS EKSVENMKGVQCKRVARSINSVGLYVPGGTAVLPST
Sbjct: 118 PAIKEAFDVAYSNIYAFHAAQKSPEKSVENMKGVQCKRVARSINSVGLYVPGGTAVLPST 177

Query: 174 ALMLSVPAQIAGCKTIVLANPPTRDGTTCKEVLYCAKKAGVTHILKAGGAQAISAMAWGT 233
           ALML+VPAQIAGCKTIVLANPPTRDGTTCKEVLYCAKKAGVTH+LKAGGAQAISAMAWGT
Sbjct: 178 ALMLAVPAQIAGCKTIVLANPPTRDGTTCKEVLYCAKKAGVTHLLKAGGAQAISAMAWGT 237

Query: 234 ETCPKVEKIFGPGNQYVTAAKMILQNSEAMVSIDMPAGPSEVLVIADKNAIPSHVAADLL 293
           ETCPKVEKIFGPGNQYVTAAKMILQNSEAMVSIDMPAGPSEVLVIADK+AIPSHVAADLL
Sbjct: 238 ETCPKVEKIFGPGNQYVTAAKMILQNSEAMVSIDMPAGPSEVLVIADKHAIPSHVAADLL 297

Query: 294 SQAEHGPDSQVVLVIAGDGVDLNAIQEELSKQCQSLPRGEFASKALSHSFIVHARDMLEA 353
           SQAEHGPDSQVVLVIAGDGVD NAIQEE+SKQCQSLPRGEFA+KALSHSFIVHARDMLEA
Sbjct: 298 SQAEHGPDSQVVLVIAGDGVDQNAIQEEVSKQCQSLPRGEFAAKALSHSFIVHARDMLEA 357

Query: 354 ITFSNLYAPEHLIINVKDAEKWESFIENAGSVFLGQWTPESVGDYASGTNHVLPTYGYAR 413
           ITFSN+YAPEHLIINVKDAEKWESFIENAGSVFLG WTPESVGDYASGTNHVLPTYGYAR
Sbjct: 358 ITFSNMYAPEHLIINVKDAEKWESFIENAGSVFLGSWTPESVGDYASGTNHVLPTYGYAR 417

Query: 414 MYSGVSLDSFLKYITVQSLTEEGLRRLGPFVATMADVEGLEAHKRAVTLRLQDIEARQVQ 473
           MYSGVSLDSFLKYITVQSLTEEGLR+LGP+V TMA+VEGLEAHKRAVTLRLQDIEARQV 
Sbjct: 418 MYSGVSLDSFLKYITVQSLTEEGLRKLGPYVETMAEVEGLEAHKRAVTLRLQDIEARQVS 477

Query: 474 R 474
           R
Sbjct: 478 R 478