Miyakogusa Predicted Gene

Lj6g3v1618290.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1618290.2 Non Characterized Hit- tr|D7TKP7|D7TKP7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,67.11,0,seg,NULL; Toprim_4,Toprim domain; AAA_25,NULL; no
description,Toprim domain; P-loop containing nucle,CUFF.59703.2
         (695 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g031620.1 | toprim domain protein | HC | chr2:11972720-119...  1117   0.0  
Medtr2g031740.1 | nucleic acid-binding protein, putative | HC | ...   329   6e-90
Medtr5g099220.1 | nucleic acid-binding protein, putative | HC | ...   314   2e-85
Medtr5g099220.2 | nucleic acid-binding protein, putative | HC | ...   295   7e-80
Medtr5g099220.4 | nucleic acid-binding protein, putative | HC | ...   295   7e-80
Medtr5g099220.5 | nucleic acid-binding protein, putative | HC | ...   285   1e-76
Medtr5g099220.3 | nucleic acid-binding protein, putative | HC | ...   270   3e-72
Medtr5g099220.6 | nucleic acid-binding protein, putative | HC | ...   265   1e-70

>Medtr2g031620.1 | toprim domain protein | HC |
           chr2:11972720-11960338 | 20130731
          Length = 687

 Score = 1117 bits (2890), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 539/696 (77%), Positives = 593/696 (85%), Gaps = 10/696 (1%)

Query: 1   MLLRHPHTLFPLFTSSKLATTMTTQTLFHTIPFXXXXXXXXXXXXXXX-XXAFFTVFCSK 59
           M  R+PH + PLF+      TM TQTL ++ PF                   FFTVFCSK
Sbjct: 1   MRFRYPHAVVPLFS------TMNTQTLSNSTPFSNLQKSLFLQTRFFQPKRPFFTVFCSK 54

Query: 60  PVSKHLPSPLRTNGYAGASYSTVPRPARLENPEDSSVHMKFEALKKKLKVVGIETETCLP 119
             SK  P PL+TNGY G S + VPRP  LE   ++S+  +F+ LKKKL+VVG++T  C+P
Sbjct: 55  RASKFPPLPLKTNGYHGVSTAKVPRPVHLE---ENSMESQFDILKKKLEVVGMDTGICVP 111

Query: 120 GQHNHLTCPECLGGNSAEKSLSLYIAPDWDSAVWVCFRGTCGWTGSTQGFAGSSSYPTKK 179
           GQ+NHL CP+C GG++ EKSLS+YIAPD  SA WVCFRG CGW GSTQ FA S+SY    
Sbjct: 112 GQNNHLLCPKCQGGDTLEKSLSIYIAPDGGSAAWVCFRGKCGWQGSTQVFADSNSYSKSM 171

Query: 180 GQVIPVKKKRALKEEDLELEPLCSELVAYFSERLITKETLQRNDVKQRKYGDQIVIAFPY 239
            ++ P KKKR LKEEDL+LEPLC ELV YFSERLI+KETLQRN V QRKY DQIVI F Y
Sbjct: 172 KKLKPTKKKRELKEEDLQLEPLCDELVGYFSERLISKETLQRNGVMQRKYDDQIVIVFTY 231

Query: 240 HRNGTLVSCKYRDINKIFWQEADTEKILYGVDDIVGQSDIIIVEGEMDKLAMEEAGFRNC 299
            RNG L+SCKYRD+NK FWQEADTEKI YG+DDIVG+SD+IIVEGEMDKLAMEEAGFRNC
Sbjct: 232 RRNGALISCKYRDVNKKFWQEADTEKIFYGLDDIVGESDVIIVEGEMDKLAMEEAGFRNC 291

Query: 300 VSVPDGAPPAVSSKELPPTEKDRKYQYLWNCKNELKQASRIILATDGDQPGQALAEELAR 359
           +SVPDGAPP+VSSKELPP E+D KYQYLWNCK+ELK+ASRIILATDGD PGQAL+EELAR
Sbjct: 292 ISVPDGAPPSVSSKELPPLEQDTKYQYLWNCKDELKKASRIILATDGDPPGQALSEELAR 351

Query: 360 RIGKEKCWRVRWPKKGRDGNCKDANEVLMYLGPEALREVIENAELFPIRGLFNFRDYFDE 419
           R GKEKCWRVRWPKKG+  +CKDANEVLMYLGP+AL+EVIENAEL+PIRGLFNFRDYFDE
Sbjct: 352 RFGKEKCWRVRWPKKGKSDDCKDANEVLMYLGPDALKEVIENAELYPIRGLFNFRDYFDE 411

Query: 420 IDAYYHRTQGYDIGLSTGWNNLNELYNVVPGELTIVTGVPNSGKSEWIDALICNLNKSDG 479
           IDAYYHRT GYD GLSTGWNNLN LYN+VPGELTIVTGVPNSGKSEWIDAL+CNLN+S G
Sbjct: 412 IDAYYHRTLGYDSGLSTGWNNLNGLYNIVPGELTIVTGVPNSGKSEWIDALLCNLNQSAG 471

Query: 480 WKFALCSMENKVSQHARKLLEKHWKKPFINSRYGEHAERMSVEEYEQGKLWLSDTFYLIR 539
           WKFALCSMENKV +HARKLLEKH KKPF N RY E AERMS+EEYE+GKLWL+DTFYLIR
Sbjct: 472 WKFALCSMENKVREHARKLLEKHVKKPFFNDRYAEDAERMSLEEYEEGKLWLNDTFYLIR 531

Query: 540 CEDDALPNVKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTLIKRF 599
           CE+DALPN+KWVL+LAKAAVLRHGVRGLVIDPYNELDHQRPPN TETEYVSQMLTLIKRF
Sbjct: 532 CENDALPNIKWVLDLAKAAVLRHGVRGLVIDPYNELDHQRPPNMTETEYVSQMLTLIKRF 591

Query: 600 AQHHGCHVWFVAHPRQLHNWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPEAGALDQV 659
           AQHHGCHVWFVAHPRQLHNWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPEAG +DQV
Sbjct: 592 AQHHGCHVWFVAHPRQLHNWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPEAGPVDQV 651

Query: 660 QVCVRKVRNKVAGTIGEAFLAYNRVTGEYTAVDNKR 695
           QVCVRKVRNKVAGTIGEA L YNRVTGEY+  D KR
Sbjct: 652 QVCVRKVRNKVAGTIGEAALFYNRVTGEYSEDDRKR 687


>Medtr2g031740.1 | nucleic acid-binding protein, putative | HC |
           chr2:12027020-12021611 | 20130731
          Length = 339

 Score =  329 bits (843), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 168/307 (54%), Positives = 213/307 (69%), Gaps = 17/307 (5%)

Query: 99  KFEALKKKLKVVGI--ETETCLPGQHNHLTCPECLGGNSAEKSLSLYIAPDWDSAVWVCF 156
           K + LK KL+ +GI  +  +CL G +++L CP+C GG   E+SLS +I  + D A+W CF
Sbjct: 42  KVQILKHKLEPLGITLDNNSCLSGMYHNLYCPKCKGGQLMERSLSFHIITNGDFAMWRCF 101

Query: 157 RGTCGWTGSTQGFAGSSSYPTKKGQVIPVKKKRALKEEDLELEPLCSELVAYFSERLITK 216
           R TCGW G  Q FA       K              EE L LEPL  +LVAYF ERLI++
Sbjct: 102 RPTCGWAG--QVFADDKELDNKP------------DEESLRLEPLGPKLVAYFKERLISE 147

Query: 217 ETLQRNDVKQRKYGDQIVIAFPYHRNGTLVSCKYRDINKIFWQEADTEKILYGVDDIVGQ 276
           +TL RN V+Q   GD+ VIAF Y +NG +V CKYR + K FW    T+K+ YG+DDI+  
Sbjct: 148 KTLSRNAVRQLS-GDKNVIAFTYTQNGLIVGCKYRTMEKRFWLGKGTKKVFYGLDDIIHA 206

Query: 277 SDIIIVEGEMDKLAMEEAGFRNCVSVPDGAPPAVSSKELPPTEKDRKYQYLWNCKNELKQ 336
           ++IIIVEGE+DKL++EEAG++NCVSVP GAP  VSSK+LPP EKD  +QYLWNCK  L +
Sbjct: 207 TEIIIVEGEIDKLSLEEAGYQNCVSVPVGAPGKVSSKDLPPIEKDTAFQYLWNCKAYLDK 266

Query: 337 ASRIILATDGDQPGQALAEELARRIGKEKCWRVRWPKKGRDGNCKDANEVLMYLGPEALR 396
             RIILATD D PGQALAEELARR+G+E+CW+VRWPKK      KDANEVL Y+G +AL+
Sbjct: 267 VGRIILATDSDPPGQALAEELARRLGRERCWQVRWPKKDEFSFFKDANEVLKYMGADALK 326

Query: 397 EVIENAE 403
            ++ENAE
Sbjct: 327 RIVENAE 333


>Medtr5g099220.1 | nucleic acid-binding protein, putative | HC |
           chr5:43494450-43500262 | 20130731
          Length = 331

 Score =  314 bits (805), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 165/311 (53%), Positives = 213/311 (68%), Gaps = 16/311 (5%)

Query: 96  VHMKFEALKKKLKVVGIETE-TCLPGQHNHLTCPECLGGNSAEKSLSLYIAPDWDSAVWV 154
           +  K + LK K++ +GI  + +CLPG +++L CP+C GG   E+SLS +I  D + A+W 
Sbjct: 32  LSTKVKILKHKVEPLGISLDNSCLPGNYHNLFCPKCKGGQLMERSLSFHIITDGEFAIWR 91

Query: 155 CFRGTCGWTGSTQGFAGSSSYPTKKGQVIPVKKKRALKEEDLELEPLCSELVAYFSERLI 214
           CFR  CGW       AG  S   K+    P        EE L LEPL  +LVAYF ERLI
Sbjct: 92  CFRPICGW-------AGQVSADDKELDNKP-------DEESLGLEPLGPKLVAYFKERLI 137

Query: 215 TKETLQRNDVKQRKYGDQIVIAFPYHRNGTLVSCKYRDINKIFWQEADTEKILYGVDDIV 274
           +++TL RN V+Q    ++ VIAF Y +NG +V CKYR + K FWQ    +K+LYG+DDI 
Sbjct: 138 SEKTLSRNSVRQLS-DEKNVIAFTYKQNGLIVGCKYRTMEKRFWQGKVIDKVLYGLDDIS 196

Query: 275 GQSDIIIVEGEMDKLAMEEAGFRNCVSVPDGAPPAVSSKELPPTEKDRKYQYLWNCKNEL 334
             ++IIIVEGE+DKL++EEAG++NCVSVPDGAP  VSSK+ PP EKD  YQYLWN K+ L
Sbjct: 197 HATEIIIVEGEIDKLSLEEAGYQNCVSVPDGAPGKVSSKDPPPIEKDTAYQYLWNSKDYL 256

Query: 335 KQASRIILATDGDQPGQALAEELARRIGKEKCWRVRWPKKGRDGNCKDANEVLMYLGPEA 394
            +  RIILATD D PGQALAEELARR+G+E+CW+VRWPKK      KDANEVL Y+G  A
Sbjct: 257 DKVVRIILATDNDPPGQALAEELARRLGRERCWQVRWPKKDELSFFKDANEVLKYMGANA 316

Query: 395 LREVIENAELF 405
           L+ ++E AE +
Sbjct: 317 LKRIVEKAEPY 327


>Medtr5g099220.2 | nucleic acid-binding protein, putative | HC |
           chr5:43494370-43500460 | 20130731
          Length = 338

 Score =  295 bits (756), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 156/291 (53%), Positives = 199/291 (68%), Gaps = 16/291 (5%)

Query: 96  VHMKFEALKKKLKVVGIETE-TCLPGQHNHLTCPECLGGNSAEKSLSLYIAPDWDSAVWV 154
           +  K + LK K++ +GI  + +CLPG +++L CP+C GG   E+SLS +I  D + A+W 
Sbjct: 37  LSTKVKILKHKVEPLGISLDNSCLPGNYHNLFCPKCKGGQLMERSLSFHIITDGEFAIWR 96

Query: 155 CFRGTCGWTGSTQGFAGSSSYPTKKGQVIPVKKKRALKEEDLELEPLCSELVAYFSERLI 214
           CFR  CGW       AG  S   K+    P        EE L LEPL  +LVAYF ERLI
Sbjct: 97  CFRPICGW-------AGQVSADDKELDNKP-------DEESLGLEPLGPKLVAYFKERLI 142

Query: 215 TKETLQRNDVKQRKYGDQIVIAFPYHRNGTLVSCKYRDINKIFWQEADTEKILYGVDDIV 274
           +++TL RN V+Q    ++ VIAF Y +NG +V CKYR + K FWQ    +K+LYG+DDI 
Sbjct: 143 SEKTLSRNSVRQLS-DEKNVIAFTYKQNGLIVGCKYRTMEKRFWQGKVIDKVLYGLDDIS 201

Query: 275 GQSDIIIVEGEMDKLAMEEAGFRNCVSVPDGAPPAVSSKELPPTEKDRKYQYLWNCKNEL 334
             ++IIIVEGE+DKL++EEAG++NCVSVPDGAP  VSSK+ PP EKD  YQYLWN K+ L
Sbjct: 202 HATEIIIVEGEIDKLSLEEAGYQNCVSVPDGAPGKVSSKDPPPIEKDTAYQYLWNSKDYL 261

Query: 335 KQASRIILATDGDQPGQALAEELARRIGKEKCWRVRWPKKGRDGNCKDANE 385
            +  RIILATD D PGQALAEELARR+G+E+CW+VRWPKK      KDANE
Sbjct: 262 DKVVRIILATDNDPPGQALAEELARRLGRERCWQVRWPKKDELSFFKDANE 312


>Medtr5g099220.4 | nucleic acid-binding protein, putative | HC |
           chr5:43494370-43500460 | 20130731
          Length = 338

 Score =  295 bits (756), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 156/291 (53%), Positives = 199/291 (68%), Gaps = 16/291 (5%)

Query: 96  VHMKFEALKKKLKVVGIETE-TCLPGQHNHLTCPECLGGNSAEKSLSLYIAPDWDSAVWV 154
           +  K + LK K++ +GI  + +CLPG +++L CP+C GG   E+SLS +I  D + A+W 
Sbjct: 37  LSTKVKILKHKVEPLGISLDNSCLPGNYHNLFCPKCKGGQLMERSLSFHIITDGEFAIWR 96

Query: 155 CFRGTCGWTGSTQGFAGSSSYPTKKGQVIPVKKKRALKEEDLELEPLCSELVAYFSERLI 214
           CFR  CGW       AG  S   K+    P        EE L LEPL  +LVAYF ERLI
Sbjct: 97  CFRPICGW-------AGQVSADDKELDNKP-------DEESLGLEPLGPKLVAYFKERLI 142

Query: 215 TKETLQRNDVKQRKYGDQIVIAFPYHRNGTLVSCKYRDINKIFWQEADTEKILYGVDDIV 274
           +++TL RN V+Q    ++ VIAF Y +NG +V CKYR + K FWQ    +K+LYG+DDI 
Sbjct: 143 SEKTLSRNSVRQLS-DEKNVIAFTYKQNGLIVGCKYRTMEKRFWQGKVIDKVLYGLDDIS 201

Query: 275 GQSDIIIVEGEMDKLAMEEAGFRNCVSVPDGAPPAVSSKELPPTEKDRKYQYLWNCKNEL 334
             ++IIIVEGE+DKL++EEAG++NCVSVPDGAP  VSSK+ PP EKD  YQYLWN K+ L
Sbjct: 202 HATEIIIVEGEIDKLSLEEAGYQNCVSVPDGAPGKVSSKDPPPIEKDTAYQYLWNSKDYL 261

Query: 335 KQASRIILATDGDQPGQALAEELARRIGKEKCWRVRWPKKGRDGNCKDANE 385
            +  RIILATD D PGQALAEELARR+G+E+CW+VRWPKK      KDANE
Sbjct: 262 DKVVRIILATDNDPPGQALAEELARRLGRERCWQVRWPKKDELSFFKDANE 312


>Medtr5g099220.5 | nucleic acid-binding protein, putative | HC |
           chr5:43494613-43500460 | 20130731
          Length = 259

 Score =  285 bits (728), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 149/269 (55%), Positives = 186/269 (69%), Gaps = 15/269 (5%)

Query: 137 EKSLSLYIAPDWDSAVWVCFRGTCGWTGSTQGFAGSSSYPTKKGQVIPVKKKRALKEEDL 196
           E+SLS +I  D + A+W CFR  CGW       AG  S   K+    P        EE L
Sbjct: 2   ERSLSFHIITDGEFAIWRCFRPICGW-------AGQVSADDKELDNKP-------DEESL 47

Query: 197 ELEPLCSELVAYFSERLITKETLQRNDVKQRKYGDQIVIAFPYHRNGTLVSCKYRDINKI 256
            LEPL  +LVAYF ERLI+++TL RN V+Q    ++ VIAF Y +NG +V CKYR + K 
Sbjct: 48  GLEPLGPKLVAYFKERLISEKTLSRNSVRQLS-DEKNVIAFTYKQNGLIVGCKYRTMEKR 106

Query: 257 FWQEADTEKILYGVDDIVGQSDIIIVEGEMDKLAMEEAGFRNCVSVPDGAPPAVSSKELP 316
           FWQ    +K+LYG+DDI   ++IIIVEGE+DKL++EEAG++NCVSVPDGAP  VSSK+ P
Sbjct: 107 FWQGKVIDKVLYGLDDISHATEIIIVEGEIDKLSLEEAGYQNCVSVPDGAPGKVSSKDPP 166

Query: 317 PTEKDRKYQYLWNCKNELKQASRIILATDGDQPGQALAEELARRIGKEKCWRVRWPKKGR 376
           P EKD  YQYLWN K+ L +  RIILATD D PGQALAEELARR+G+E+CW+VRWPKK  
Sbjct: 167 PIEKDTAYQYLWNSKDYLDKVVRIILATDNDPPGQALAEELARRLGRERCWQVRWPKKDE 226

Query: 377 DGNCKDANEVLMYLGPEALREVIENAELF 405
               KDANEVL Y+G  AL+ ++E AE +
Sbjct: 227 LSFFKDANEVLKYMGANALKRIVEKAEPY 255


>Medtr5g099220.3 | nucleic acid-binding protein, putative | HC |
           chr5:43494371-43500444 | 20130731
          Length = 333

 Score =  270 bits (690), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 143/268 (53%), Positives = 184/268 (68%), Gaps = 16/268 (5%)

Query: 99  KFEALKKKLKVVGIETE-TCLPGQHNHLTCPECLGGNSAEKSLSLYIAPDWDSAVWVCFR 157
           K + LK K++ +GI  + +CLPG +++L CP+C GG   E+SLS +I  D + A+W CFR
Sbjct: 40  KVKILKHKVEPLGISLDNSCLPGNYHNLFCPKCKGGQLMERSLSFHIITDGEFAIWRCFR 99

Query: 158 GTCGWTGSTQGFAGSSSYPTKKGQVIPVKKKRALKEEDLELEPLCSELVAYFSERLITKE 217
             CGW       AG  S   K+    P        EE L LEPL  +LVAYF ERLI+++
Sbjct: 100 PICGW-------AGQVSADDKELDNKP-------DEESLGLEPLGPKLVAYFKERLISEK 145

Query: 218 TLQRNDVKQRKYGDQIVIAFPYHRNGTLVSCKYRDINKIFWQEADTEKILYGVDDIVGQS 277
           TL RN V+Q    ++ VIAF Y +NG +V CKYR + K FWQ    +K+LYG+DDI   +
Sbjct: 146 TLSRNSVRQLS-DEKNVIAFTYKQNGLIVGCKYRTMEKRFWQGKVIDKVLYGLDDISHAT 204

Query: 278 DIIIVEGEMDKLAMEEAGFRNCVSVPDGAPPAVSSKELPPTEKDRKYQYLWNCKNELKQA 337
           +IIIVEGE+DKL++EEAG++NCVSVPDGAP  VSSK+ PP EKD  YQYLWN K+ L + 
Sbjct: 205 EIIIVEGEIDKLSLEEAGYQNCVSVPDGAPGKVSSKDPPPIEKDTAYQYLWNSKDYLDKV 264

Query: 338 SRIILATDGDQPGQALAEELARRIGKEK 365
            RIILATD D PGQALAEELARR+G+E+
Sbjct: 265 VRIILATDNDPPGQALAEELARRLGRER 292


>Medtr5g099220.6 | nucleic acid-binding protein, putative | HC |
           chr5:43494613-43500460 | 20130731
          Length = 261

 Score =  265 bits (677), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 140/249 (56%), Positives = 172/249 (69%), Gaps = 15/249 (6%)

Query: 137 EKSLSLYIAPDWDSAVWVCFRGTCGWTGSTQGFAGSSSYPTKKGQVIPVKKKRALKEEDL 196
           E+SLS +I  D + A+W CFR  CGW       AG  S   K+    P        EE L
Sbjct: 2   ERSLSFHIITDGEFAIWRCFRPICGW-------AGQVSADDKELDNKP-------DEESL 47

Query: 197 ELEPLCSELVAYFSERLITKETLQRNDVKQRKYGDQIVIAFPYHRNGTLVSCKYRDINKI 256
            LEPL  +LVAYF ERLI+++TL RN V+Q    ++ VIAF Y +NG +V CKYR + K 
Sbjct: 48  GLEPLGPKLVAYFKERLISEKTLSRNSVRQLS-DEKNVIAFTYKQNGLIVGCKYRTMEKR 106

Query: 257 FWQEADTEKILYGVDDIVGQSDIIIVEGEMDKLAMEEAGFRNCVSVPDGAPPAVSSKELP 316
           FWQ    +K+LYG+DDI   ++IIIVEGE+DKL++EEAG++NCVSVPDGAP  VSSK+ P
Sbjct: 107 FWQGKVIDKVLYGLDDISHATEIIIVEGEIDKLSLEEAGYQNCVSVPDGAPGKVSSKDPP 166

Query: 317 PTEKDRKYQYLWNCKNELKQASRIILATDGDQPGQALAEELARRIGKEKCWRVRWPKKGR 376
           P EKD  YQYLWN K+ L +  RIILATD D PGQALAEELARR+G+E+CW+VRWPKK  
Sbjct: 167 PIEKDTAYQYLWNSKDYLDKVVRIILATDNDPPGQALAEELARRLGRERCWQVRWPKKDE 226

Query: 377 DGNCKDANE 385
               KDANE
Sbjct: 227 LSFFKDANE 235