Miyakogusa Predicted Gene

Lj6g3v1618200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1618200.1 Non Characterized Hit- tr|E2NIF0|E2NIF0_9BACE
Putative uncharacterized protein OS=Bacteroides
cellul,30.8,4e-18,Toprim_4,Toprim domain; DNA primase core,NULL; no
description,Toprim domain; seg,NULL,CUFF.59678.1
         (386 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g099220.1 | nucleic acid-binding protein, putative | HC | ...   488   e-138
Medtr2g031740.1 | nucleic acid-binding protein, putative | HC | ...   487   e-138
Medtr5g099220.2 | nucleic acid-binding protein, putative | HC | ...   450   e-127
Medtr5g099220.4 | nucleic acid-binding protein, putative | HC | ...   450   e-127
Medtr5g099220.5 | nucleic acid-binding protein, putative | HC | ...   436   e-122
Medtr5g099220.3 | nucleic acid-binding protein, putative | HC | ...   418   e-117
Medtr5g099220.6 | nucleic acid-binding protein, putative | HC | ...   398   e-111
Medtr2g031620.1 | toprim domain protein | HC | chr2:11972720-119...   335   4e-92

>Medtr5g099220.1 | nucleic acid-binding protein, putative | HC |
           chr5:43494450-43500262 | 20130731
          Length = 331

 Score =  488 bits (1256), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 259/385 (67%), Positives = 289/385 (75%), Gaps = 55/385 (14%)

Query: 1   MSVYQSLRLHRPLTQSLFPKLLPXXXXXXXXXXXXVSVSPRRICTVSCHSVAHATTTVPS 60
           MS+ QS  L RPLT+SLF                  S   +R     CHS+  +T     
Sbjct: 1   MSICQSWWLCRPLTKSLF------------------SPQTQRFW---CHSLPLST----- 34

Query: 61  PPDGGEQIVDDDIFDAPRMKMLKQKMDLLGIKLDNTCVPALYHNLRCPKCKGGRSKERSL 120
                            ++K+LK K++ LGI LDN+C+P  YHNL CPKCKGG+  ERSL
Sbjct: 35  -----------------KVKILKHKVEPLGISLDNSCLPGNYHNLFCPKCKGGQLMERSL 77

Query: 121 SFHIISDCEFAMWRCFRPECGWAGRVFADDMELDGKVSANAKPYGQTTEKSLGLEPLGPQ 180
           SFHII+D EFA+WRCFRP CGWAG+V ADD ELD K            E+SLGLEPLGP+
Sbjct: 78  SFHIITDGEFAIWRCFRPICGWAGQVSADDKELDNK----------PDEESLGLEPLGPK 127

Query: 181 LLAYFKERLISEKTLSRNAVRQLSDSDDKKVIAFTYKQNGLLVGCKYRTVEKRFWQGKGT 240
           L+AYFKERLISEKTLSRN+VRQLSD  +K VIAFTYKQNGL+VGCKYRT+EKRFWQGK  
Sbjct: 128 LVAYFKERLISEKTLSRNSVRQLSD--EKNVIAFTYKQNGLIVGCKYRTMEKRFWQGKVI 185

Query: 241 DKVLYGIDDISHASEIIIVEGEIDKLSLEEAGFQNCVSVPVGAPGKVSFKDLPPREKDTA 300
           DKVLYG+DDISHA+EIIIVEGEIDKLSLEEAG+QNCVSVP GAPGKVS KD PP EKDTA
Sbjct: 186 DKVLYGLDDISHATEIIIVEGEIDKLSLEEAGYQNCVSVPDGAPGKVSSKDPPPIEKDTA 245

Query: 301 YQYLWNCKEYLDKVVRIILATDNDQPGQALAEELARRLGHERCWRVHWPKKDESSCFKDA 360
           YQYLWN K+YLDKVVRIILATDND PGQALAEELARRLG ERCW+V WPKKDE S FKDA
Sbjct: 246 YQYLWNSKDYLDKVVRIILATDNDPPGQALAEELARRLGRERCWQVRWPKKDELSFFKDA 305

Query: 361 NEVLKYMGADALKRMVENAEPYTSA 385
           NEVLKYMGA+ALKR+VE AEPYT A
Sbjct: 306 NEVLKYMGANALKRIVEKAEPYTCA 330


>Medtr2g031740.1 | nucleic acid-binding protein, putative | HC |
           chr2:12027020-12021611 | 20130731
          Length = 339

 Score =  487 bits (1254), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 248/346 (71%), Positives = 277/346 (80%), Gaps = 21/346 (6%)

Query: 41  RRICTVSCHSVAHATTTVPSPPDGGEQIVDDDIFDAPRMKMLKQKMDLLGIKLDN-TCVP 99
           RR  T S  S+ H+TTT  +                 ++++LK K++ LGI LDN +C+ 
Sbjct: 13  RRPLTKSVFSI-HSTTTSYAAASSLP-------LSTTKVQILKHKLEPLGITLDNNSCLS 64

Query: 100 ALYHNLRCPKCKGGRSKERSLSFHIISDCEFAMWRCFRPECGWAGRVFADDMELDGKVSA 159
            +YHNL CPKCKGG+  ERSLSFHII++ +FAMWRCFRP CGWAG+VFADD ELD K   
Sbjct: 65  GMYHNLYCPKCKGGQLMERSLSFHIITNGDFAMWRCFRPTCGWAGQVFADDKELDNK--- 121

Query: 160 NAKPYGQTTEKSLGLEPLGPQLLAYFKERLISEKTLSRNAVRQLSDSDDKKVIAFTYKQN 219
                    E+SL LEPLGP+L+AYFKERLISEKTLSRNAVRQLS   DK VIAFTY QN
Sbjct: 122 -------PDEESLRLEPLGPKLVAYFKERLISEKTLSRNAVRQLSG--DKNVIAFTYTQN 172

Query: 220 GLLVGCKYRTVEKRFWQGKGTDKVLYGIDDISHASEIIIVEGEIDKLSLEEAGFQNCVSV 279
           GL+VGCKYRT+EKRFW GKGT KV YG+DDI HA+EIIIVEGEIDKLSLEEAG+QNCVSV
Sbjct: 173 GLIVGCKYRTMEKRFWLGKGTKKVFYGLDDIIHATEIIIVEGEIDKLSLEEAGYQNCVSV 232

Query: 280 PVGAPGKVSFKDLPPREKDTAYQYLWNCKEYLDKVVRIILATDNDQPGQALAEELARRLG 339
           PVGAPGKVS KDLPP EKDTA+QYLWNCK YLDKV RIILATD+D PGQALAEELARRLG
Sbjct: 233 PVGAPGKVSSKDLPPIEKDTAFQYLWNCKAYLDKVGRIILATDSDPPGQALAEELARRLG 292

Query: 340 HERCWRVHWPKKDESSCFKDANEVLKYMGADALKRMVENAEPYTSA 385
            ERCW+V WPKKDE S FKDANEVLKYMGADALKR+VENAEPYTSA
Sbjct: 293 RERCWQVRWPKKDEFSFFKDANEVLKYMGADALKRIVENAEPYTSA 338


>Medtr5g099220.2 | nucleic acid-binding protein, putative | HC |
           chr5:43494370-43500460 | 20130731
          Length = 338

 Score =  450 bits (1158), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 240/362 (66%), Positives = 268/362 (74%), Gaps = 55/362 (15%)

Query: 1   MSVYQSLRLHRPLTQSLFPKLLPXXXXXXXXXXXXVSVSPRRICTVSCHSVAHATTTVPS 60
           MS+ QS  L RPLT+SLF                  S   +R     CHS+  +T     
Sbjct: 6   MSICQSWWLCRPLTKSLF------------------SPQTQRFW---CHSLPLST----- 39

Query: 61  PPDGGEQIVDDDIFDAPRMKMLKQKMDLLGIKLDNTCVPALYHNLRCPKCKGGRSKERSL 120
                            ++K+LK K++ LGI LDN+C+P  YHNL CPKCKGG+  ERSL
Sbjct: 40  -----------------KVKILKHKVEPLGISLDNSCLPGNYHNLFCPKCKGGQLMERSL 82

Query: 121 SFHIISDCEFAMWRCFRPECGWAGRVFADDMELDGKVSANAKPYGQTTEKSLGLEPLGPQ 180
           SFHII+D EFA+WRCFRP CGWAG+V ADD ELD K            E+SLGLEPLGP+
Sbjct: 83  SFHIITDGEFAIWRCFRPICGWAGQVSADDKELDNK----------PDEESLGLEPLGPK 132

Query: 181 LLAYFKERLISEKTLSRNAVRQLSDSDDKKVIAFTYKQNGLLVGCKYRTVEKRFWQGKGT 240
           L+AYFKERLISEKTLSRN+VRQLSD  +K VIAFTYKQNGL+VGCKYRT+EKRFWQGK  
Sbjct: 133 LVAYFKERLISEKTLSRNSVRQLSD--EKNVIAFTYKQNGLIVGCKYRTMEKRFWQGKVI 190

Query: 241 DKVLYGIDDISHASEIIIVEGEIDKLSLEEAGFQNCVSVPVGAPGKVSFKDLPPREKDTA 300
           DKVLYG+DDISHA+EIIIVEGEIDKLSLEEAG+QNCVSVP GAPGKVS KD PP EKDTA
Sbjct: 191 DKVLYGLDDISHATEIIIVEGEIDKLSLEEAGYQNCVSVPDGAPGKVSSKDPPPIEKDTA 250

Query: 301 YQYLWNCKEYLDKVVRIILATDNDQPGQALAEELARRLGHERCWRVHWPKKDESSCFKDA 360
           YQYLWN K+YLDKVVRIILATDND PGQALAEELARRLG ERCW+V WPKKDE S FKDA
Sbjct: 251 YQYLWNSKDYLDKVVRIILATDNDPPGQALAEELARRLGRERCWQVRWPKKDELSFFKDA 310

Query: 361 NE 362
           NE
Sbjct: 311 NE 312


>Medtr5g099220.4 | nucleic acid-binding protein, putative | HC |
           chr5:43494370-43500460 | 20130731
          Length = 338

 Score =  450 bits (1158), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 240/362 (66%), Positives = 268/362 (74%), Gaps = 55/362 (15%)

Query: 1   MSVYQSLRLHRPLTQSLFPKLLPXXXXXXXXXXXXVSVSPRRICTVSCHSVAHATTTVPS 60
           MS+ QS  L RPLT+SLF                  S   +R     CHS+  +T     
Sbjct: 6   MSICQSWWLCRPLTKSLF------------------SPQTQRFW---CHSLPLST----- 39

Query: 61  PPDGGEQIVDDDIFDAPRMKMLKQKMDLLGIKLDNTCVPALYHNLRCPKCKGGRSKERSL 120
                            ++K+LK K++ LGI LDN+C+P  YHNL CPKCKGG+  ERSL
Sbjct: 40  -----------------KVKILKHKVEPLGISLDNSCLPGNYHNLFCPKCKGGQLMERSL 82

Query: 121 SFHIISDCEFAMWRCFRPECGWAGRVFADDMELDGKVSANAKPYGQTTEKSLGLEPLGPQ 180
           SFHII+D EFA+WRCFRP CGWAG+V ADD ELD K            E+SLGLEPLGP+
Sbjct: 83  SFHIITDGEFAIWRCFRPICGWAGQVSADDKELDNK----------PDEESLGLEPLGPK 132

Query: 181 LLAYFKERLISEKTLSRNAVRQLSDSDDKKVIAFTYKQNGLLVGCKYRTVEKRFWQGKGT 240
           L+AYFKERLISEKTLSRN+VRQLSD  +K VIAFTYKQNGL+VGCKYRT+EKRFWQGK  
Sbjct: 133 LVAYFKERLISEKTLSRNSVRQLSD--EKNVIAFTYKQNGLIVGCKYRTMEKRFWQGKVI 190

Query: 241 DKVLYGIDDISHASEIIIVEGEIDKLSLEEAGFQNCVSVPVGAPGKVSFKDLPPREKDTA 300
           DKVLYG+DDISHA+EIIIVEGEIDKLSLEEAG+QNCVSVP GAPGKVS KD PP EKDTA
Sbjct: 191 DKVLYGLDDISHATEIIIVEGEIDKLSLEEAGYQNCVSVPDGAPGKVSSKDPPPIEKDTA 250

Query: 301 YQYLWNCKEYLDKVVRIILATDNDQPGQALAEELARRLGHERCWRVHWPKKDESSCFKDA 360
           YQYLWN K+YLDKVVRIILATDND PGQALAEELARRLG ERCW+V WPKKDE S FKDA
Sbjct: 251 YQYLWNSKDYLDKVVRIILATDNDPPGQALAEELARRLGRERCWQVRWPKKDELSFFKDA 310

Query: 361 NE 362
           NE
Sbjct: 311 NE 312


>Medtr5g099220.5 | nucleic acid-binding protein, putative | HC |
           chr5:43494613-43500460 | 20130731
          Length = 259

 Score =  436 bits (1122), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 218/269 (81%), Positives = 235/269 (87%), Gaps = 12/269 (4%)

Query: 117 ERSLSFHIISDCEFAMWRCFRPECGWAGRVFADDMELDGKVSANAKPYGQTTEKSLGLEP 176
           ERSLSFHII+D EFA+WRCFRP CGWAG+V ADD ELD K            E+SLGLEP
Sbjct: 2   ERSLSFHIITDGEFAIWRCFRPICGWAGQVSADDKELDNK----------PDEESLGLEP 51

Query: 177 LGPQLLAYFKERLISEKTLSRNAVRQLSDSDDKKVIAFTYKQNGLLVGCKYRTVEKRFWQ 236
           LGP+L+AYFKERLISEKTLSRN+VRQLSD  +K VIAFTYKQNGL+VGCKYRT+EKRFWQ
Sbjct: 52  LGPKLVAYFKERLISEKTLSRNSVRQLSD--EKNVIAFTYKQNGLIVGCKYRTMEKRFWQ 109

Query: 237 GKGTDKVLYGIDDISHASEIIIVEGEIDKLSLEEAGFQNCVSVPVGAPGKVSFKDLPPRE 296
           GK  DKVLYG+DDISHA+EIIIVEGEIDKLSLEEAG+QNCVSVP GAPGKVS KD PP E
Sbjct: 110 GKVIDKVLYGLDDISHATEIIIVEGEIDKLSLEEAGYQNCVSVPDGAPGKVSSKDPPPIE 169

Query: 297 KDTAYQYLWNCKEYLDKVVRIILATDNDQPGQALAEELARRLGHERCWRVHWPKKDESSC 356
           KDTAYQYLWN K+YLDKVVRIILATDND PGQALAEELARRLG ERCW+V WPKKDE S 
Sbjct: 170 KDTAYQYLWNSKDYLDKVVRIILATDNDPPGQALAEELARRLGRERCWQVRWPKKDELSF 229

Query: 357 FKDANEVLKYMGADALKRMVENAEPYTSA 385
           FKDANEVLKYMGA+ALKR+VE AEPYT A
Sbjct: 230 FKDANEVLKYMGANALKRIVEKAEPYTCA 258


>Medtr5g099220.3 | nucleic acid-binding protein, putative | HC |
           chr5:43494371-43500444 | 20130731
          Length = 333

 Score =  418 bits (1074), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 224/342 (65%), Positives = 251/342 (73%), Gaps = 55/342 (16%)

Query: 1   MSVYQSLRLHRPLTQSLFPKLLPXXXXXXXXXXXXVSVSPRRICTVSCHSVAHATTTVPS 60
           MS+ QS  L RPLT+SLF                  S   +R     CHS+  +T     
Sbjct: 6   MSICQSWWLCRPLTKSLF------------------SPQTQRFW---CHSLPLST----- 39

Query: 61  PPDGGEQIVDDDIFDAPRMKMLKQKMDLLGIKLDNTCVPALYHNLRCPKCKGGRSKERSL 120
                            ++K+LK K++ LGI LDN+C+P  YHNL CPKCKGG+  ERSL
Sbjct: 40  -----------------KVKILKHKVEPLGISLDNSCLPGNYHNLFCPKCKGGQLMERSL 82

Query: 121 SFHIISDCEFAMWRCFRPECGWAGRVFADDMELDGKVSANAKPYGQTTEKSLGLEPLGPQ 180
           SFHII+D EFA+WRCFRP CGWAG+V ADD ELD K            E+SLGLEPLGP+
Sbjct: 83  SFHIITDGEFAIWRCFRPICGWAGQVSADDKELDNK----------PDEESLGLEPLGPK 132

Query: 181 LLAYFKERLISEKTLSRNAVRQLSDSDDKKVIAFTYKQNGLLVGCKYRTVEKRFWQGKGT 240
           L+AYFKERLISEKTLSRN+VRQLSD  +K VIAFTYKQNGL+VGCKYRT+EKRFWQGK  
Sbjct: 133 LVAYFKERLISEKTLSRNSVRQLSD--EKNVIAFTYKQNGLIVGCKYRTMEKRFWQGKVI 190

Query: 241 DKVLYGIDDISHASEIIIVEGEIDKLSLEEAGFQNCVSVPVGAPGKVSFKDLPPREKDTA 300
           DKVLYG+DDISHA+EIIIVEGEIDKLSLEEAG+QNCVSVP GAPGKVS KD PP EKDTA
Sbjct: 191 DKVLYGLDDISHATEIIIVEGEIDKLSLEEAGYQNCVSVPDGAPGKVSSKDPPPIEKDTA 250

Query: 301 YQYLWNCKEYLDKVVRIILATDNDQPGQALAEELARRLGHER 342
           YQYLWN K+YLDKVVRIILATDND PGQALAEELARRLG ER
Sbjct: 251 YQYLWNSKDYLDKVVRIILATDNDPPGQALAEELARRLGRER 292


>Medtr5g099220.6 | nucleic acid-binding protein, putative | HC |
           chr5:43494613-43500460 | 20130731
          Length = 261

 Score =  398 bits (1023), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 199/246 (80%), Positives = 214/246 (86%), Gaps = 12/246 (4%)

Query: 117 ERSLSFHIISDCEFAMWRCFRPECGWAGRVFADDMELDGKVSANAKPYGQTTEKSLGLEP 176
           ERSLSFHII+D EFA+WRCFRP CGWAG+V ADD ELD K            E+SLGLEP
Sbjct: 2   ERSLSFHIITDGEFAIWRCFRPICGWAGQVSADDKELDNK----------PDEESLGLEP 51

Query: 177 LGPQLLAYFKERLISEKTLSRNAVRQLSDSDDKKVIAFTYKQNGLLVGCKYRTVEKRFWQ 236
           LGP+L+AYFKERLISEKTLSRN+VRQLSD  +K VIAFTYKQNGL+VGCKYRT+EKRFWQ
Sbjct: 52  LGPKLVAYFKERLISEKTLSRNSVRQLSD--EKNVIAFTYKQNGLIVGCKYRTMEKRFWQ 109

Query: 237 GKGTDKVLYGIDDISHASEIIIVEGEIDKLSLEEAGFQNCVSVPVGAPGKVSFKDLPPRE 296
           GK  DKVLYG+DDISHA+EIIIVEGEIDKLSLEEAG+QNCVSVP GAPGKVS KD PP E
Sbjct: 110 GKVIDKVLYGLDDISHATEIIIVEGEIDKLSLEEAGYQNCVSVPDGAPGKVSSKDPPPIE 169

Query: 297 KDTAYQYLWNCKEYLDKVVRIILATDNDQPGQALAEELARRLGHERCWRVHWPKKDESSC 356
           KDTAYQYLWN K+YLDKVVRIILATDND PGQALAEELARRLG ERCW+V WPKKDE S 
Sbjct: 170 KDTAYQYLWNSKDYLDKVVRIILATDNDPPGQALAEELARRLGRERCWQVRWPKKDELSF 229

Query: 357 FKDANE 362
           FKDANE
Sbjct: 230 FKDANE 235


>Medtr2g031620.1 | toprim domain protein | HC |
           chr2:11972720-11960338 | 20130731
          Length = 687

 Score =  335 bits (859), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 180/347 (51%), Positives = 230/347 (66%), Gaps = 14/347 (4%)

Query: 40  PRRICTVSCHSVAHATTTVPSPPDGGEQIVDDDIFDAPRMKMLKQKMDLLGIKLDNTCVP 99
           P  + T   H V+  T  VP P    E  ++   FD     +LK+K++++G+     CVP
Sbjct: 61  PLPLKTNGYHGVS--TAKVPRPVHLEENSMESQ-FD-----ILKKKLEVVGMDT-GICVP 111

Query: 100 ALYHNLRCPKCKGGRSKERSLSFHIISDCEFAMWRCFRPECGWAG--RVFADDMELDGKV 157
              ++L CPKC+GG + E+SLS +I  D   A W CFR +CGW G  +VFAD       +
Sbjct: 112 GQNNHLLCPKCQGGDTLEKSLSIYIAPDGGSAAWVCFRGKCGWQGSTQVFADSNSYSKSM 171

Query: 158 SANAKPYG--QTTEKSLGLEPLGPQLLAYFKERLISEKTLSRNAVRQLSDSDDKKVIAFT 215
                     +  E+ L LEPL  +L+ YF ERLIS++TL RN V Q    DD+ VI FT
Sbjct: 172 KKLKPTKKKRELKEEDLQLEPLCDELVGYFSERLISKETLQRNGVMQ-RKYDDQIVIVFT 230

Query: 216 YKQNGLLVGCKYRTVEKRFWQGKGTDKVLYGIDDISHASEIIIVEGEIDKLSLEEAGFQN 275
           Y++NG L+ CKYR V K+FWQ   T+K+ YG+DDI   S++IIVEGE+DKL++EEAGF+N
Sbjct: 231 YRRNGALISCKYRDVNKKFWQEADTEKIFYGLDDIVGESDVIIVEGEMDKLAMEEAGFRN 290

Query: 276 CVSVPVGAPGKVSFKDLPPREKDTAYQYLWNCKEYLDKVVRIILATDNDQPGQALAEELA 335
           C+SVP GAP  VS K+LPP E+DT YQYLWNCK+ L K  RIILATD D PGQAL+EELA
Sbjct: 291 CISVPDGAPPSVSSKELPPLEQDTKYQYLWNCKDELKKASRIILATDGDPPGQALSEELA 350

Query: 336 RRLGHERCWRVHWPKKDESSCFKDANEVLKYMGADALKRMVENAEPY 382
           RR G E+CWRV WPKK +S   KDANEVL Y+G DALK ++ENAE Y
Sbjct: 351 RRFGKEKCWRVRWPKKGKSDDCKDANEVLMYLGPDALKEVIENAELY 397