Miyakogusa Predicted Gene
- Lj6g3v1606080.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1606080.1 CUFF.59659.1
(418 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g018630.1 | plant organelle RNA recognition domain protein... 703 0.0
Medtr8g089370.2 | plant organelle RNA recognition domain protein... 215 6e-56
Medtr8g089370.1 | plant organelle RNA recognition domain protein... 215 6e-56
Medtr7g107280.1 | plant organelle RNA recognition domain protein... 197 2e-50
Medtr4g053720.1 | plant organelle RNA recognition domain protein... 192 4e-49
Medtr6g043850.1 | plant organelle RNA recognition domain protein... 172 4e-43
Medtr1g019170.4 | plant organelle RNA recognition domain protein... 119 5e-27
Medtr1g019170.3 | plant organelle RNA recognition domain protein... 119 5e-27
Medtr1g019170.1 | plant organelle RNA recognition domain protein... 119 5e-27
Medtr1g019170.2 | plant organelle RNA recognition domain protein... 119 5e-27
Medtr1g072550.1 | plant organelle RNA recognition domain protein... 118 1e-26
Medtr1g072550.2 | plant organelle RNA recognition domain protein... 118 1e-26
Medtr3g029990.2 | ubiquitin carboxyl-terminal hydrolase family p... 116 4e-26
Medtr3g029990.1 | ubiquitin carboxyl-terminal hydrolase family p... 116 4e-26
Medtr7g117270.1 | plant organelle RNA recognition domain protein... 115 1e-25
Medtr1g032380.1 | plant organelle RNA recognition domain protein... 114 2e-25
Medtr1g032040.1 | plant organelle RNA recognition domain protein... 114 2e-25
Medtr1g098960.1 | plant organelle RNA recognition domain protein... 111 1e-24
Medtr3g105530.1 | plant organelle RNA recognition domain protein... 109 5e-24
Medtr3g063230.1 | plant organelle RNA recognition domain protein... 105 8e-23
Medtr7g088530.1 | plant organelle RNA recognition domain protein... 105 1e-22
Medtr6g033595.1 | plant organelle RNA recognition domain protein... 104 1e-22
Medtr8g102038.1 | plant organelle RNA recognition domain protein... 102 8e-22
Medtr3g030020.1 | plant organelle RNA recognition domain protein... 100 4e-21
Medtr3g063230.2 | plant organelle RNA recognition domain protein... 94 3e-19
Medtr3g074730.1 | plant organelle RNA recognition domain protein... 87 4e-17
Medtr0153s0070.2 | plant organelle RNA recognition domain protei... 86 9e-17
Medtr0153s0070.1 | plant organelle RNA recognition domain protei... 82 7e-16
Medtr3g083350.1 | plant organelle RNA recognition domain protein... 82 1e-15
Medtr3g448960.1 | plant organelle RNA recognition domain protein... 78 2e-14
Medtr2g067960.1 | plant organelle RNA recognition domain protein... 74 3e-13
>Medtr7g018630.1 | plant organelle RNA recognition domain protein |
HC | chr7:6083157-6084419 | 20130731
Length = 420
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/420 (80%), Positives = 379/420 (90%), Gaps = 4/420 (0%)
Query: 1 MLFNFERS--KTLRELLRPYEKSIFSFKFKIPGLPFSHIQRHSYVNVYMKWKKDSYYDSI 58
MLFNFE+S KT+R+ LRP E+SI F +KIP LPFSHIQR +YVNVYMKWKKDSYYDSI
Sbjct: 1 MLFNFEKSAAKTIRKALRPIEESISPFSYKIPCLPFSHIQRFNYVNVYMKWKKDSYYDSI 60
Query: 59 EHIHQSIQLKPVIALKNCITQDPNGCIPISAVSKKGLQLDVPMKVARFLRQYPSIFEEFT 118
EHIH SIQLKPVIALKNCI QDPNGCIPIS+VSK+GLQLDVPMKVARFLRQYPSIFEEFT
Sbjct: 61 EHIHHSIQLKPVIALKNCIAQDPNGCIPISSVSKRGLQLDVPMKVARFLRQYPSIFEEFT 120
Query: 119 GPQYNHPWFRLTAEAAEIDRDEKRVYEECREDLRSRLRKMILMTKENVLPLKIIQGMLWY 178
GP+YNHPWFRLT EAAEIDRDEKRVYEE RE+LRSRL+KMILMTKENVLPLKIIQGM WY
Sbjct: 121 GPKYNHPWFRLTPEAAEIDRDEKRVYEESREELRSRLKKMILMTKENVLPLKIIQGMQWY 180
Query: 179 LGLPNDYLQYPEQNFDESFRFVEMEDGLKGLAVESREKVCSVMEKNAMKRGL-YSGGAME 237
LGLP+D+LQ+ EQN D+SFRFVEMEDGLKGLA+ESRE+V SVME+NAMK+G+ Y G E
Sbjct: 181 LGLPHDFLQHHEQNLDDSFRFVEMEDGLKGLAIESRERVYSVMEENAMKKGMYYDGSQTE 240
Query: 238 AIEFPFFPSNGLRLRRKIENWLHEFQKLPYISPYDDFSNLDPDSDIAEKRLVGFLHELLA 297
AIEFPFFPS LR++ KIENWLHEFQKLPYISPYDDFSNLDP+SDIAEKRL+G LHELL+
Sbjct: 241 AIEFPFFPSKALRMKTKIENWLHEFQKLPYISPYDDFSNLDPNSDIAEKRLIGVLHELLS 300
Query: 298 LFVEHSAERRKLFCLKKHFGLPQKVHKAFERHPHMFYLSFRNKTCSVILKEAYCDESAIE 357
LF++HSAERRKL CLKK+FG PQKVH+AFERHPHMFY+S RNKTC+VILKEAYC+E AIE
Sbjct: 301 LFIDHSAERRKLLCLKKYFGFPQKVHRAFERHPHMFYMSMRNKTCTVILKEAYCNELAIE 360
Query: 358 NHPILRVRKKYIKLMKESKVILRNKRVNGRFSNCSEKLDLDSNDLDERELHMADCSSEQA 417
NHP+L VRK+YIKLMKES+VILRN+R+N RFSN SEKLDL+SNDLDE E + S EQ
Sbjct: 361 NHPLLSVRKRYIKLMKESEVILRNRRMNSRFSN-SEKLDLESNDLDEGEHKIEGFSLEQV 419
>Medtr8g089370.2 | plant organelle RNA recognition domain protein |
HC | chr8:37138838-37141109 | 20130731
Length = 389
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 129/350 (36%), Positives = 199/350 (56%), Gaps = 11/350 (3%)
Query: 34 FSHIQRHSYVNVYMKWKKDSYYDSIEHIHQSIQLKPVIALKNCITQDPNGCIPISAVSKK 93
+ ++Q+ S VN+ +KW KD DS+ + LK L + I +PI +S+
Sbjct: 22 YIYLQKFSLVNIKLKWVKDRTMDSV--VVGKRDLKAAGILVSVIYSSSEDYVPIYRLSRH 79
Query: 94 GLQLDVP--MKVARFLRQYPSIFEE---FTGPQYNHPWFRLTAEAAEIDRDEKRVYEECR 148
QL +P +K+A F+R+YP++F E P F L++EA +I R+E + E
Sbjct: 80 RGQLGLPDEIKLAVFIRRYPNVFVESYSLDSGGSPVPCFGLSSEAMKIHREEVDILRENS 139
Query: 149 EDLRSRLRKMILMTKENVLPLKIIQGMLWYLGLPNDYLQYPEQNFDESFRFVEMED---G 205
+ R RL K++++T++ +LPL+ I + W LGLP DY N E F FV + D G
Sbjct: 140 LEFRDRLCKLLMLTRDWMLPLQTIDQLKWDLGLPYDYQDSFVMNHPEKFSFVRLPDVRVG 199
Query: 206 LKGLAVESREKVCSVMEKNAMKRGLYSGGAMEAIEFPFFPSNGLRLRRKIENWLHEFQKL 265
LK L + + V S +EKNA + + FP + G ++RK WL E+QKL
Sbjct: 200 LKLLFWDDKLAV-SELEKNASLQQQVEDIKNGTLAFPVSFTRGFGMKRKSMEWLREWQKL 258
Query: 266 PYISPYDDFSNLDPDSDIAEKRLVGFLHELLALFVEHSAERRKLFCLKKHFGLPQKVHKA 325
PY SPY D S+LD +D++EKR+VG HELL L + ER+ + L++ LPQK KA
Sbjct: 259 PYTSPYADASHLDIRTDVSEKRVVGVFHELLHLTLHKQTERKNVSNLRRPLALPQKFTKA 318
Query: 326 FERHPHMFYLSFRNKTCSVILKEAYCDESAIENHPILRVRKKYIKLMKES 375
FERHP +FY+S +N T +V+L+EAY ++ HP++++R++ L+K+
Sbjct: 319 FERHPGIFYISKKNDTQTVVLREAYNGGELVQKHPLVKIREELANLLKKG 368
>Medtr8g089370.1 | plant organelle RNA recognition domain protein |
HC | chr8:37138838-37141109 | 20130731
Length = 389
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 129/350 (36%), Positives = 199/350 (56%), Gaps = 11/350 (3%)
Query: 34 FSHIQRHSYVNVYMKWKKDSYYDSIEHIHQSIQLKPVIALKNCITQDPNGCIPISAVSKK 93
+ ++Q+ S VN+ +KW KD DS+ + LK L + I +PI +S+
Sbjct: 22 YIYLQKFSLVNIKLKWVKDRTMDSV--VVGKRDLKAAGILVSVIYSSSEDYVPIYRLSRH 79
Query: 94 GLQLDVP--MKVARFLRQYPSIFEE---FTGPQYNHPWFRLTAEAAEIDRDEKRVYEECR 148
QL +P +K+A F+R+YP++F E P F L++EA +I R+E + E
Sbjct: 80 RGQLGLPDEIKLAVFIRRYPNVFVESYSLDSGGSPVPCFGLSSEAMKIHREEVDILRENS 139
Query: 149 EDLRSRLRKMILMTKENVLPLKIIQGMLWYLGLPNDYLQYPEQNFDESFRFVEMED---G 205
+ R RL K++++T++ +LPL+ I + W LGLP DY N E F FV + D G
Sbjct: 140 LEFRDRLCKLLMLTRDWMLPLQTIDQLKWDLGLPYDYQDSFVMNHPEKFSFVRLPDVRVG 199
Query: 206 LKGLAVESREKVCSVMEKNAMKRGLYSGGAMEAIEFPFFPSNGLRLRRKIENWLHEFQKL 265
LK L + + V S +EKNA + + FP + G ++RK WL E+QKL
Sbjct: 200 LKLLFWDDKLAV-SELEKNASLQQQVEDIKNGTLAFPVSFTRGFGMKRKSMEWLREWQKL 258
Query: 266 PYISPYDDFSNLDPDSDIAEKRLVGFLHELLALFVEHSAERRKLFCLKKHFGLPQKVHKA 325
PY SPY D S+LD +D++EKR+VG HELL L + ER+ + L++ LPQK KA
Sbjct: 259 PYTSPYADASHLDIRTDVSEKRVVGVFHELLHLTLHKQTERKNVSNLRRPLALPQKFTKA 318
Query: 326 FERHPHMFYLSFRNKTCSVILKEAYCDESAIENHPILRVRKKYIKLMKES 375
FERHP +FY+S +N T +V+L+EAY ++ HP++++R++ L+K+
Sbjct: 319 FERHPGIFYISKKNDTQTVVLREAYNGGELVQKHPLVKIREELANLLKKG 368
>Medtr7g107280.1 | plant organelle RNA recognition domain protein |
HC | chr7:43760664-43762324 | 20130731
Length = 420
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 204/407 (50%), Gaps = 27/407 (6%)
Query: 26 KFKIPGLPFSHIQ----RHSYVNVYMKWKKDSYYDSIEHIHQSIQLKPVIALKNCITQDP 81
KFK LPF ++Q V +KW K+ D I I + LK LK+ I +
Sbjct: 5 KFKTAMLPFQNLQLQFQSRGIAKVRLKWVKNRSIDHI--IDKETDLKAASLLKDAIKRSS 62
Query: 82 NGCIPISAVS--KKGLQLDVPMKVARFLRQYPSIFEEFTGPQYNH-PWFRLTAEAAEIDR 138
+ S +K L L VP V RF+R+YP++F EF P++N P FRLT A +D
Sbjct: 63 TSFLTAKTFSDWQKLLGLTVP--VLRFIRRYPTLFHEFPHPRWNSLPCFRLTDTAQLLDS 120
Query: 139 DEKRVYEECREDLRSRLRKMILMTKENVLPLKIIQGMLWYLGLPNDYLQYPEQNFDESFR 198
E+ +Y D+ R K+++M K +P++ + + + LGLP+ + + + + F+
Sbjct: 121 QEQSIYAVHENDIVERFSKVLMMMKSRTVPIQSLYPLKFDLGLPDAFEKTLIPKYPDKFQ 180
Query: 199 FVEMEDGLKGL---------AVESREKVCSVMEKNAMKRGLYSGGAMEAIEFPFFPSNGL 249
FV+ +G+ + AV + +K +NA + A+ FP G
Sbjct: 181 FVKAGNGVSAIRLVDWCDEFAVSALQKSNQCESENASDQYRDFKRGKTALVFPMRFPRGY 240
Query: 250 RLRRKIENWLHEFQKLPYISPYDDFSNLDPDSDIAEKRLVGFLHELLALFVEHSAERRKL 309
++K+ W+ EFQKLPYISPY D S +DP SD+ EKR+VG LHE L+L + +R L
Sbjct: 241 GGQKKVRFWMDEFQKLPYISPYADSSKIDPKSDLMEKRVVGVLHEFLSLCLHKKTKRNYL 300
Query: 310 FCLKKHFGLPQKVHKAFERHPHMFYLSFRNKTCSVILKEAYCDESAIENHPILRVRKKYI 369
L++ LP K + F R+P +FYLS + KT +V L+E Y ++ HP+ R R K+
Sbjct: 301 RSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVTLREGYARGKLVDPHPLARHRDKFY 360
Query: 370 KLMKESKVILRNKRVNGRFSNCSEKLDLDSNDLDERELHMADCSSEQ 416
+M+ + ++ R + S LD ND M D SE+
Sbjct: 361 HVMR-TGLLYRGDGSLKLGEDASLMLDSVEND------EMGDGDSEE 400
>Medtr4g053720.1 | plant organelle RNA recognition domain protein |
HC | chr4:19386178-19384121 | 20130731
Length = 357
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 187/351 (53%), Gaps = 13/351 (3%)
Query: 34 FSHIQRHSYVNVYMKWKKDSYYDSIEHIHQSIQLKPVIALKNCITQDPNGCIPISAVSKK 93
F HI+ ++VN +KW +D Y D+ + + LK VI+LKN I P+ + + S
Sbjct: 11 FDHIR--TFVNARVKWVRDDYLDTA--VLKEKNLKHVISLKNHIVSSPSKSLSLYNASML 66
Query: 94 GLQLDVPMKVARFLRQYPSIFEEFTGPQYNHPWFRLTAEAAEIDRDEKRVYEE--CREDL 151
L++PM + + +Y +F +F P +LTA+A + ++E V+ +ED
Sbjct: 67 KASLNLPMITIKLVEKYHHVFMQFQPSPGLPPRIKLTAQALALHKEEMEVHNSRTNQEDA 126
Query: 152 RSRLRKMILMTKENVLPLKIIQGMLWYLGLPNDYLQYPEQNFDESFRFVEMEDGLKG--- 208
RL +++++ LP+ +I+ + W +GLP+DY+ + + F +ED L G
Sbjct: 127 AQRLARLLMLAGMARLPIYVIEKLKWDMGLPHDYVTTLLAYYPDYFDVCVVEDPLSGKEV 186
Query: 209 LAVE----SREKVCSVMEKNAMKRGLYSGGAMEAIEFPFFPSNGLRLRRKIENWLHEFQK 264
LA+E +E S +EK M + I+FP F L ++++ W+ +Q
Sbjct: 187 LALELVSWRKELSVSELEKRVMGFNYDADKRRHDIQFPMFLPKSFALEKRVKTWVEGWQT 246
Query: 265 LPYISPYDDFSNLDPDSDIAEKRLVGFLHELLALFVEHSAERRKLFCLKKHFGLPQKVHK 324
LPYISPY++ +LD +SD AEK V LHELL+L V E L C + GL + K
Sbjct: 247 LPYISPYENAFHLDSNSDQAEKWTVAILHELLSLLVSKKTESENLICYGECLGLGSRFKK 306
Query: 325 AFERHPHMFYLSFRNKTCSVILKEAYCDESAIENHPILRVRKKYIKLMKES 375
A HP +FYLS + +T + +L+EAY +E ++NHP++ R YI LM ++
Sbjct: 307 ALVHHPGIFYLSNKIRTQTAVLREAYRNEFLVKNHPVMGTRYWYIHLMTKA 357
>Medtr6g043850.1 | plant organelle RNA recognition domain protein |
LC | chr6:15115306-15109090 | 20130731
Length = 664
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 175/308 (56%), Gaps = 16/308 (5%)
Query: 77 ITQDPNGCIPISAVSKKGLQLDVPMKVARFLRQYPSIFEEFTGPQYNH-----PWFRLTA 131
I +P +PIS + K+ L++P + F+R+YPS+FEEF YN+ P +LTA
Sbjct: 56 INNEPTKSLPISII-KQSRSLNLPFRPIEFIRKYPSVFEEF----YNNGCTFEPHVKLTA 110
Query: 132 EAAEIDRDEK--RVYEECREDLRSRLRKMILMTKENVLPLKIIQGMLWYLGLPNDYLQYP 189
+A +++ DEK + ++D+ R+ K++++ K N +PL ++ G+ W LGLP+DY++
Sbjct: 111 KAIDLNADEKFLVASDVFKKDVAVRVLKLLMIAKGNKIPLSVVDGLKWDLGLPDDYVKSV 170
Query: 190 EQNFDESFRFVEMED-GLKGLAVESREKVCSVMEKNAMKRGLYSGGAMEAIEFPFFPSNG 248
F + FR V +++ + L S++ S +EK K G + G + + FP S G
Sbjct: 171 IPEFPDHFRVVGVDNNAVLELVCWSKKHSVSFLEK---KYGDKAKGQGKELGFPVQFSTG 227
Query: 249 LRLRRKIENWLHEFQKLPYISPYDDFSNLDPDSDIAEKRLVGFLHELLALFVEHSAERRK 308
+ +K E W+ E+ L Y+SPY++ NL S+ ++K +VG LHE+L L V E+
Sbjct: 228 FEMDKKYEKWVKEWNGLRYVSPYENGVNLSGSSEESDKWVVGVLHEILNLLVSKKTEKDN 287
Query: 309 LFCLKKHFGLPQKVHKAFERHPHMFYLSFRNKTCSVILKEAYCDESAIENHPILRVRKKY 368
+ + + GL + + +HP +FY+S +N+ +V+L++ Y +E++P + R++Y
Sbjct: 288 VLMIGEWLGLASRFKRVILQHPGIFYVSSKNRMYTVVLRDGYKRGLLVEDNPAMEFRRRY 347
Query: 369 IKLMKESK 376
I LM K
Sbjct: 348 IHLMNTVK 355
>Medtr1g019170.4 | plant organelle RNA recognition domain protein |
HC | chr1:5720388-5724512 | 20130731
Length = 416
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 145/302 (48%), Gaps = 26/302 (8%)
Query: 81 PNGCIPISAVSKKGLQLDVPMKVARFLRQYPSIFEEFTGPQYNHPWFRLTAEAAEIDRDE 140
PN IPI + KK LD+ K ++ +YPS F Q++ LT E+ +E
Sbjct: 55 PNNQIPIQTLQKKFKTLDLQGKALNWISKYPSCF------QFHQDHVLLTKRMMELVHEE 108
Query: 141 KRVYEECREDLRSRLRKMILMTKENVLPLKIIQGMLWYLGLPNDYLQYPEQNFDESFRFV 200
+ + + RL K+++++ N L + I + LG P+DYL + + FR
Sbjct: 109 QSLKDSLESVFVPRLAKLLMLSLNNCLNVMKINEIKNSLGFPDDYLIGIVAKYPDLFRIR 168
Query: 201 EMEDGLKGLAVE----SREKVCSVMEKNAMKRGLYSGGAMEAIEFPF---FPSNGLRLRR 253
+ VE + + S +E AMK G +E F PS+ ++
Sbjct: 169 NESGRRSSMVVELMKWNPDFAVSEVEALAMKNG---------VEVNFSCCLPSSWVKSLE 219
Query: 254 KIENWLHEFQKLPYISPYDDFSNLDPDSDIAEKRLVGFLHELLALFVEHSAERRKLFCLK 313
K HEF+ +PY+SPY D L S EKR VG +HELL+L + KL K
Sbjct: 220 K----FHEFELVPYVSPYSDPRGLVEGSKEMEKRNVGLVHELLSLTLWKKISIMKLGHFK 275
Query: 314 KHFGLPQKVHKAFERHPHMFYLSFRNKTCSVILKEAYCDESAIENHPILRVRKKYIKLMK 373
+ F LP KV+ +HP +FY+S + + +V+L+E Y ++ P++ V++K+ ++M+
Sbjct: 276 REFFLPDKVNVLLLKHPGIFYVSNKYRIYTVLLREGYVGSQLVDKDPLVVVKEKFGEIMQ 335
Query: 374 ES 375
E
Sbjct: 336 EG 337
>Medtr1g019170.3 | plant organelle RNA recognition domain protein |
HC | chr1:5720163-5724512 | 20130731
Length = 416
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 145/302 (48%), Gaps = 26/302 (8%)
Query: 81 PNGCIPISAVSKKGLQLDVPMKVARFLRQYPSIFEEFTGPQYNHPWFRLTAEAAEIDRDE 140
PN IPI + KK LD+ K ++ +YPS F Q++ LT E+ +E
Sbjct: 55 PNNQIPIQTLQKKFKTLDLQGKALNWISKYPSCF------QFHQDHVLLTKRMMELVHEE 108
Query: 141 KRVYEECREDLRSRLRKMILMTKENVLPLKIIQGMLWYLGLPNDYLQYPEQNFDESFRFV 200
+ + + RL K+++++ N L + I + LG P+DYL + + FR
Sbjct: 109 QSLKDSLESVFVPRLAKLLMLSLNNCLNVMKINEIKNSLGFPDDYLIGIVAKYPDLFRIR 168
Query: 201 EMEDGLKGLAVE----SREKVCSVMEKNAMKRGLYSGGAMEAIEFPF---FPSNGLRLRR 253
+ VE + + S +E AMK G +E F PS+ ++
Sbjct: 169 NESGRRSSMVVELMKWNPDFAVSEVEALAMKNG---------VEVNFSCCLPSSWVKSLE 219
Query: 254 KIENWLHEFQKLPYISPYDDFSNLDPDSDIAEKRLVGFLHELLALFVEHSAERRKLFCLK 313
K HEF+ +PY+SPY D L S EKR VG +HELL+L + KL K
Sbjct: 220 K----FHEFELVPYVSPYSDPRGLVEGSKEMEKRNVGLVHELLSLTLWKKISIMKLGHFK 275
Query: 314 KHFGLPQKVHKAFERHPHMFYLSFRNKTCSVILKEAYCDESAIENHPILRVRKKYIKLMK 373
+ F LP KV+ +HP +FY+S + + +V+L+E Y ++ P++ V++K+ ++M+
Sbjct: 276 REFFLPDKVNVLLLKHPGIFYVSNKYRIYTVLLREGYVGSQLVDKDPLVVVKEKFGEIMQ 335
Query: 374 ES 375
E
Sbjct: 336 EG 337
>Medtr1g019170.1 | plant organelle RNA recognition domain protein |
HC | chr1:5720173-5724512 | 20130731
Length = 416
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 145/302 (48%), Gaps = 26/302 (8%)
Query: 81 PNGCIPISAVSKKGLQLDVPMKVARFLRQYPSIFEEFTGPQYNHPWFRLTAEAAEIDRDE 140
PN IPI + KK LD+ K ++ +YPS F Q++ LT E+ +E
Sbjct: 55 PNNQIPIQTLQKKFKTLDLQGKALNWISKYPSCF------QFHQDHVLLTKRMMELVHEE 108
Query: 141 KRVYEECREDLRSRLRKMILMTKENVLPLKIIQGMLWYLGLPNDYLQYPEQNFDESFRFV 200
+ + + RL K+++++ N L + I + LG P+DYL + + FR
Sbjct: 109 QSLKDSLESVFVPRLAKLLMLSLNNCLNVMKINEIKNSLGFPDDYLIGIVAKYPDLFRIR 168
Query: 201 EMEDGLKGLAVE----SREKVCSVMEKNAMKRGLYSGGAMEAIEFPF---FPSNGLRLRR 253
+ VE + + S +E AMK G +E F PS+ ++
Sbjct: 169 NESGRRSSMVVELMKWNPDFAVSEVEALAMKNG---------VEVNFSCCLPSSWVKSLE 219
Query: 254 KIENWLHEFQKLPYISPYDDFSNLDPDSDIAEKRLVGFLHELLALFVEHSAERRKLFCLK 313
K HEF+ +PY+SPY D L S EKR VG +HELL+L + KL K
Sbjct: 220 K----FHEFELVPYVSPYSDPRGLVEGSKEMEKRNVGLVHELLSLTLWKKISIMKLGHFK 275
Query: 314 KHFGLPQKVHKAFERHPHMFYLSFRNKTCSVILKEAYCDESAIENHPILRVRKKYIKLMK 373
+ F LP KV+ +HP +FY+S + + +V+L+E Y ++ P++ V++K+ ++M+
Sbjct: 276 REFFLPDKVNVLLLKHPGIFYVSNKYRIYTVLLREGYVGSQLVDKDPLVVVKEKFGEIMQ 335
Query: 374 ES 375
E
Sbjct: 336 EG 337
>Medtr1g019170.2 | plant organelle RNA recognition domain protein |
HC | chr1:5720163-5724512 | 20130731
Length = 416
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 145/302 (48%), Gaps = 26/302 (8%)
Query: 81 PNGCIPISAVSKKGLQLDVPMKVARFLRQYPSIFEEFTGPQYNHPWFRLTAEAAEIDRDE 140
PN IPI + KK LD+ K ++ +YPS F Q++ LT E+ +E
Sbjct: 55 PNNQIPIQTLQKKFKTLDLQGKALNWISKYPSCF------QFHQDHVLLTKRMMELVHEE 108
Query: 141 KRVYEECREDLRSRLRKMILMTKENVLPLKIIQGMLWYLGLPNDYLQYPEQNFDESFRFV 200
+ + + RL K+++++ N L + I + LG P+DYL + + FR
Sbjct: 109 QSLKDSLESVFVPRLAKLLMLSLNNCLNVMKINEIKNSLGFPDDYLIGIVAKYPDLFRIR 168
Query: 201 EMEDGLKGLAVE----SREKVCSVMEKNAMKRGLYSGGAMEAIEFPF---FPSNGLRLRR 253
+ VE + + S +E AMK G +E F PS+ ++
Sbjct: 169 NESGRRSSMVVELMKWNPDFAVSEVEALAMKNG---------VEVNFSCCLPSSWVKSLE 219
Query: 254 KIENWLHEFQKLPYISPYDDFSNLDPDSDIAEKRLVGFLHELLALFVEHSAERRKLFCLK 313
K HEF+ +PY+SPY D L S EKR VG +HELL+L + KL K
Sbjct: 220 K----FHEFELVPYVSPYSDPRGLVEGSKEMEKRNVGLVHELLSLTLWKKISIMKLGHFK 275
Query: 314 KHFGLPQKVHKAFERHPHMFYLSFRNKTCSVILKEAYCDESAIENHPILRVRKKYIKLMK 373
+ F LP KV+ +HP +FY+S + + +V+L+E Y ++ P++ V++K+ ++M+
Sbjct: 276 REFFLPDKVNVLLLKHPGIFYVSNKYRIYTVLLREGYVGSQLVDKDPLVVVKEKFGEIMQ 335
Query: 374 ES 375
E
Sbjct: 336 EG 337
>Medtr1g072550.1 | plant organelle RNA recognition domain protein |
HC | chr1:32201119-32198282 | 20130731
Length = 393
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 169/351 (48%), Gaps = 18/351 (5%)
Query: 36 HIQRHSYVNVYMKWKKDSYYDSIEHIHQSIQLKPVIALKNCITQDPNGCIPISAVSKKGL 95
H+ ++ + W+KD D + I Q + K + + +P IP+ + K+
Sbjct: 22 HVHTRLISSLKVVWRKDQSLD--QAIEQDKRFKQCARVVKEVLNEPGQVIPLRYLEKRRQ 79
Query: 96 QLDVPMKVARFLRQYPSIFEEF---TGPQYNHPWF-RLTAEAAEIDRDEKRVYEECREDL 151
++ + +K+ FL Q P +F+ + P+ F R++ + ++EKR+Y+E +
Sbjct: 80 RMRLKVKIDTFLNQNPFLFDVYYDRIKPKTEPVKFLRVSDHLLQFLQEEKRIYKENEPLI 139
Query: 152 RSRLRKMILMTKENVLPLKIIQGMLWYLGLPNDYLQYPEQNFDESFRFVEMEDGLKG--- 208
S+L K+++M+K+ ++ + + G PND+L + E FR GL G
Sbjct: 140 VSKLCKLLMMSKDKIVSADKLLHVKREFGFPNDFLVDLVPRYPEYFRLT----GLPGEGK 195
Query: 209 ----LAVESREKVCSVMEKNAMKRGLYSGGAMEAIEFPFFPSNGLRLRRKIENWLHEFQK 264
L + E SV+E+ A + +G + F G L++++ W+ ++ +
Sbjct: 196 SFLELVNWNPEFAKSVIERRAEEESRATGIRVRP-SFNVKLPPGFVLKKEMREWIRDWME 254
Query: 265 LPYISPYDDFSNLDPDSDIAEKRLVGFLHELLALFVEHSAERRKLFCLKKHFGLPQKVHK 324
L Y+SPY+D S+L+ S EKR VG HELL+L + L +
Sbjct: 255 LDYVSPYEDVSHLEQASREMEKRSVGVFHELLSLSLYKRVPVPILGKFCDEYRFSNAFSS 314
Query: 325 AFERHPHMFYLSFRNKTCSVILKEAYCDESAIENHPILRVRKKYIKLMKES 375
AF RH +FY+S + + +L+EAY + I+ P+L+++ ++ +L+KE
Sbjct: 315 AFTRHSGIFYMSLKGGIETAMLREAYDGDKLIDIDPLLQIKDRFAELLKEG 365
>Medtr1g072550.2 | plant organelle RNA recognition domain protein |
HC | chr1:32201119-32199304 | 20130731
Length = 393
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 169/351 (48%), Gaps = 18/351 (5%)
Query: 36 HIQRHSYVNVYMKWKKDSYYDSIEHIHQSIQLKPVIALKNCITQDPNGCIPISAVSKKGL 95
H+ ++ + W+KD D + I Q + K + + +P IP+ + K+
Sbjct: 22 HVHTRLISSLKVVWRKDQSLD--QAIEQDKRFKQCARVVKEVLNEPGQVIPLRYLEKRRQ 79
Query: 96 QLDVPMKVARFLRQYPSIFEEF---TGPQYNHPWF-RLTAEAAEIDRDEKRVYEECREDL 151
++ + +K+ FL Q P +F+ + P+ F R++ + ++EKR+Y+E +
Sbjct: 80 RMRLKVKIDTFLNQNPFLFDVYYDRIKPKTEPVKFLRVSDHLLQFLQEEKRIYKENEPLI 139
Query: 152 RSRLRKMILMTKENVLPLKIIQGMLWYLGLPNDYLQYPEQNFDESFRFVEMEDGLKG--- 208
S+L K+++M+K+ ++ + + G PND+L + E FR GL G
Sbjct: 140 VSKLCKLLMMSKDKIVSADKLLHVKREFGFPNDFLVDLVPRYPEYFRLT----GLPGEGK 195
Query: 209 ----LAVESREKVCSVMEKNAMKRGLYSGGAMEAIEFPFFPSNGLRLRRKIENWLHEFQK 264
L + E SV+E+ A + +G + F G L++++ W+ ++ +
Sbjct: 196 SFLELVNWNPEFAKSVIERRAEEESRATGIRVRP-SFNVKLPPGFVLKKEMREWIRDWME 254
Query: 265 LPYISPYDDFSNLDPDSDIAEKRLVGFLHELLALFVEHSAERRKLFCLKKHFGLPQKVHK 324
L Y+SPY+D S+L+ S EKR VG HELL+L + L +
Sbjct: 255 LDYVSPYEDVSHLEQASREMEKRSVGVFHELLSLSLYKRVPVPILGKFCDEYRFSNAFSS 314
Query: 325 AFERHPHMFYLSFRNKTCSVILKEAYCDESAIENHPILRVRKKYIKLMKES 375
AF RH +FY+S + + +L+EAY + I+ P+L+++ ++ +L+KE
Sbjct: 315 AFTRHSGIFYMSLKGGIETAMLREAYDGDKLIDIDPLLQIKDRFAELLKEG 365
>Medtr3g029990.2 | ubiquitin carboxyl-terminal hydrolase family
protein | HC | chr3:9456270-9464177 | 20130731
Length = 626
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 144/302 (47%), Gaps = 26/302 (8%)
Query: 81 PNGCIPISAVSKKGLQLDVPMKVARFLRQYPSIFEEFTGPQYNHPWFRLTAEAAEIDRDE 140
PN IPI + KK LD+ K ++ +YPS F Q++ LT E+ +E
Sbjct: 55 PNNQIPIQTLQKKFKTLDLQGKALNWISKYPSCF------QFHQDHVLLTKRMMELVHEE 108
Query: 141 KRVYEECREDLRSRLRKMILMTKENVLPLKIIQGMLWYLGLPNDYLQYPEQNFDESFRFV 200
+ + + RL K+++++ N L + I + LG P+DYL + + FR
Sbjct: 109 QSLKDSLESVFVPRLAKLLMLSLNNCLNVMKINEIKNSLGFPDDYLIGIVAKYPDLFRIR 168
Query: 201 EMEDGLKGLAVE----SREKVCSVMEKNAMKRGLYSGGAMEAIEFPF---FPSNGLRLRR 253
+ VE + + S +E AMK G +E F PS+ ++
Sbjct: 169 NESGRRSSMVVELMKWNPDFAVSEVEALAMKNG---------VEVNFSCCLPSSWVKSLE 219
Query: 254 KIENWLHEFQKLPYISPYDDFSNLDPDSDIAEKRLVGFLHELLALFVEHSAERRKLFCLK 313
K EF+ +PY+SPY D L S EKR VG +HELL+L + KL K
Sbjct: 220 K----FREFELVPYVSPYSDPRGLVEGSKEMEKRNVGLVHELLSLTLWKKISIMKLGHFK 275
Query: 314 KHFGLPQKVHKAFERHPHMFYLSFRNKTCSVILKEAYCDESAIENHPILRVRKKYIKLMK 373
+ F LP KV+ +HP +FY+S + + +V+L+E Y ++ P++ V++K+ ++M+
Sbjct: 276 REFFLPDKVNVLLLKHPGIFYVSNKYRIYTVLLREGYVGSQLVDKDPLVVVKEKFGEIMQ 335
Query: 374 ES 375
E
Sbjct: 336 EG 337
>Medtr3g029990.1 | ubiquitin carboxyl-terminal hydrolase family
protein | HC | chr3:9456270-9462535 | 20130731
Length = 630
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 144/302 (47%), Gaps = 26/302 (8%)
Query: 81 PNGCIPISAVSKKGLQLDVPMKVARFLRQYPSIFEEFTGPQYNHPWFRLTAEAAEIDRDE 140
PN IPI + KK LD+ K ++ +YPS F Q++ LT E+ +E
Sbjct: 55 PNNQIPIQTLQKKFKTLDLQGKALNWISKYPSCF------QFHQDHVLLTKRMMELVHEE 108
Query: 141 KRVYEECREDLRSRLRKMILMTKENVLPLKIIQGMLWYLGLPNDYLQYPEQNFDESFRFV 200
+ + + RL K+++++ N L + I + LG P+DYL + + FR
Sbjct: 109 QSLKDSLESVFVPRLAKLLMLSLNNCLNVMKINEIKNSLGFPDDYLIGIVAKYPDLFRIR 168
Query: 201 EMEDGLKGLAVE----SREKVCSVMEKNAMKRGLYSGGAMEAIEFPF---FPSNGLRLRR 253
+ VE + + S +E AMK G +E F PS+ ++
Sbjct: 169 NESGRRSSMVVELMKWNPDFAVSEVEALAMKNG---------VEVNFSCCLPSSWVKSLE 219
Query: 254 KIENWLHEFQKLPYISPYDDFSNLDPDSDIAEKRLVGFLHELLALFVEHSAERRKLFCLK 313
K EF+ +PY+SPY D L S EKR VG +HELL+L + KL K
Sbjct: 220 K----FREFELVPYVSPYSDPRGLVEGSKEMEKRNVGLVHELLSLTLWKKISIMKLGHFK 275
Query: 314 KHFGLPQKVHKAFERHPHMFYLSFRNKTCSVILKEAYCDESAIENHPILRVRKKYIKLMK 373
+ F LP KV+ +HP +FY+S + + +V+L+E Y ++ P++ V++K+ ++M+
Sbjct: 276 REFFLPDKVNVLLLKHPGIFYVSNKYRIYTVLLREGYVGSQLVDKDPLVVVKEKFGEIMQ 335
Query: 374 ES 375
E
Sbjct: 336 EG 337
>Medtr7g117270.1 | plant organelle RNA recognition domain protein |
HC | chr7:48441549-48444050 | 20130731
Length = 530
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 169/346 (48%), Gaps = 26/346 (7%)
Query: 43 VNVYMKWKKDSYYDSIEHIHQSIQLKPVIALKNCITQDPNGCIPISAVSK--KGLQLDVP 100
++ +K +K+ +D++ I + +LK V+ ++ + P + + + K + L LD
Sbjct: 80 ISAAVKRRKELPFDNV--IQKDKKLKFVLKVRKILVSKPTRVMSLQELGKYRRELGLDKK 137
Query: 101 MKVARFLRQYPSIFEEFTGPQYNHPWFRLTAEAAEIDRDEKRVYEECREDLRSRLRKMIL 160
K+ LR++P +FE Y+ F++T+EA ++ +E RV E + + ++LRK+++
Sbjct: 138 RKLIVILRRFPGVFEIVEDGCYSLK-FKMTSEAEKLYLEELRVRNEMEDVVVTKLRKLLM 196
Query: 161 MTKENVLPLKIIQGMLWYLGLPNDYLQYPEQNFDESFRFVEMEDGLK--------GLAVE 212
M E + L+ I + LGLP ++ + E F+ V+ E G LAV
Sbjct: 197 MPLEKRILLEKIGHLANDLGLPREFRDTICHRYPEFFKVVQTERGPALELTHWDPHLAVS 256
Query: 213 SRE------KVCSVMEKNAMKRGLYSGGAMEAIEFPFFPSNGLRLRRKIENWLHEFQKLP 266
+ E ++ V E+N + + ++ P GL L + + +F+ +P
Sbjct: 257 AAELSAEENRIREVEEQNLI---IDRAPKFNRVKLP----KGLSLSKGEMRKIMQFRDIP 309
Query: 267 YISPYDDFSNLDPDSDIAEKRLVGFLHELLALFVEHSAERRKLFCLKKHFGLPQKVHKAF 326
YISPY DFS + ++ EK G +HE+L+L +E ++ F Q++
Sbjct: 310 YISPYSDFSMIGLNTPEKEKHACGVIHEILSLTLEKRTLVDNFTHFREEFRFSQQLRGML 369
Query: 327 ERHPHMFYLSFRNKTCSVILKEAYCDESAIENHPILRVRKKYIKLM 372
RHP MFY+S + SV L+EAY D ++ +L V++K L+
Sbjct: 370 IRHPDMFYISLKGDRDSVFLREAYRDSQLVDKDRLLLVKEKLRSLV 415
>Medtr1g032380.1 | plant organelle RNA recognition domain protein |
HC | chr1:11495605-11496780 | 20130731
Length = 391
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 163/340 (47%), Gaps = 22/340 (6%)
Query: 49 WKKDSYYDSIEHIHQSIQLKPVIALKNCITQDPNGCIPISAVSKKGLQLDVPMKVARFLR 108
W+KD D + I Q + K + + +P IP+ + K+ ++ + +K+ FL
Sbjct: 35 WRKDPSLD--QAIEQDKRFKQCFRVVKEVLNEPGQVIPLRYLEKRRQRMRLKVKIDTFLN 92
Query: 109 QYPSIFEEF---TGPQYNHPWF-RLTAEAAEIDRDEKRVYEECREDLRSRLRKMILMTKE 164
Q P +F+ + P+ F R++ + +EKR+Y+E + S+L K+++M+K+
Sbjct: 93 QNPFLFDVYYDRIKPKTKPVKFLRVSDHLLQFLEEEKRIYKENEPLIVSKLCKLLMMSKD 152
Query: 165 NVLPLKIIQGMLWYLGLPNDYLQYPEQNFDESFRFVEMEDGLKG-------LAVESREKV 217
V+ + + G PND+L + E FR GL G L + E
Sbjct: 153 KVVSADKLLHVKREFGFPNDFLVDLVPRYPEYFRLT----GLPGEGKSFLELVNWNPEFA 208
Query: 218 CSVMEKNAMKRGLYSGGAMEAIEFPFFPSNGLRLRRKIENWLHEFQKLPYISPYDDFSNL 277
SV+EK A + +G + F G L++++ W+ ++ +L Y+SPY+D S+
Sbjct: 209 KSVVEKRAEEESSATGIRVRP-SFNVKLPPGFVLKKEMREWIRDWMELDYVSPYEDVSHF 267
Query: 278 DPDSDIAEKRLVGFLHELLALFVEHSAERRKL--FCLKKHFGLPQKVHKAFERHPHMFYL 335
+ S EKR VG HELL+L + L FC + F AF RH +FYL
Sbjct: 268 EQSSREMEKRSVGVFHELLSLSLYKRIPVPILGKFCDEYRFS--NAFSSAFTRHSGIFYL 325
Query: 336 SFRNKTCSVILKEAYCDESAIENHPILRVRKKYIKLMKES 375
S + + +L+EAY + I P+L+++ ++ +L+ E
Sbjct: 326 SLKGGIETAMLREAYEGDKLIHIDPLLQIKDRFAELLNEG 365
>Medtr1g032040.1 | plant organelle RNA recognition domain protein |
HC | chr1:11336962-11338761 | 20130731
Length = 391
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 163/340 (47%), Gaps = 22/340 (6%)
Query: 49 WKKDSYYDSIEHIHQSIQLKPVIALKNCITQDPNGCIPISAVSKKGLQLDVPMKVARFLR 108
W+KD D + I Q + K + + +P IP+ + K+ ++ + +K+ FL
Sbjct: 35 WRKDPSLD--QAIEQDKRFKQCFRVVKEVLNEPGQVIPLRYLEKRRQRMRLKVKIDTFLN 92
Query: 109 QYPSIFEEF---TGPQYNHPWF-RLTAEAAEIDRDEKRVYEECREDLRSRLRKMILMTKE 164
Q P +F+ + P+ F R++ + +EKR+Y+E + S+L K+++M+K+
Sbjct: 93 QNPFLFDVYYDRIKPKTKPVKFLRVSDHLLQFLEEEKRIYKENEPLIVSKLCKLLMMSKD 152
Query: 165 NVLPLKIIQGMLWYLGLPNDYLQYPEQNFDESFRFVEMEDGLKG-------LAVESREKV 217
V+ + + G PND+L + E FR GL G L + E
Sbjct: 153 KVVSADKLLHVKREFGFPNDFLVDLVPRYPEYFRLT----GLPGEGKSFLELVNWNPEFA 208
Query: 218 CSVMEKNAMKRGLYSGGAMEAIEFPFFPSNGLRLRRKIENWLHEFQKLPYISPYDDFSNL 277
SV+EK A + +G + F G L++++ W+ ++ +L Y+SPY+D S+
Sbjct: 209 KSVVEKRAEEESSATGIRVRP-SFNVKLPPGFVLKKEMREWIRDWMELDYVSPYEDVSHF 267
Query: 278 DPDSDIAEKRLVGFLHELLALFVEHSAERRKL--FCLKKHFGLPQKVHKAFERHPHMFYL 335
+ S EKR VG HELL+L + L FC + F AF RH +FYL
Sbjct: 268 EQSSREMEKRSVGVFHELLSLSLYKRIPVPILGKFCDEYRFS--NAFSSAFTRHSGIFYL 325
Query: 336 SFRNKTCSVILKEAYCDESAIENHPILRVRKKYIKLMKES 375
S + + +L+EAY + I P+L+++ ++ +L+ E
Sbjct: 326 SLKGGIETAMLREAYEGDKLIHIDPLLQIKDRFAELLNEG 365
>Medtr1g098960.1 | plant organelle RNA recognition domain protein |
HC | chr1:44599463-44600719 | 20130731
Length = 418
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 145/303 (47%), Gaps = 28/303 (9%)
Query: 81 PNGCIPISAVSKKGLQLDVPMKVARFLRQYPSIFEEFTGPQYNHPWFRLTAEAAEIDRDE 140
PN IPI + KK LD+ K ++ +YPS F Q++ LT ++ +E
Sbjct: 57 PNNQIPILTLQKKFKTLDLQGKALNWISKYPSCF------QFHQDHVLLTKRMMKLVHEE 110
Query: 141 KRVYEECREDLRSRLRKMILMTKENVLPLKIIQGMLWYLGLPNDYLQYPEQNFDESFRFV 200
+ + + RL K+++++ N L + I + GLP+DYL + + FR +
Sbjct: 111 QSLKDSLESVFVLRLAKLLMLSLNNCLNVMKINEIKNSFGLPDDYLIGIVAKYSDLFR-I 169
Query: 201 EMEDGLKGLAVESREK-----VCSVMEKNAMKRGLYSGGAMEAIEFPF---FPSNGLRLR 252
E G + V K S +E AMK G +E F PS+ ++
Sbjct: 170 RNESGRRSSMVVELMKWNPDFAVSEVEALAMKNG---------VEVNFSCCLPSSWVKSL 220
Query: 253 RKIENWLHEFQKLPYISPYDDFSNLDPDSDIAEKRLVGFLHELLALFVEHSAERRKLFCL 312
K EF+ +PY+SPY D L S EKR +G +HELL+L + KL
Sbjct: 221 EK----FREFELVPYVSPYSDPRRLVEGSKEMEKRNLGLVHELLSLTLWKKISIMKLGHF 276
Query: 313 KKHFGLPQKVHKAFERHPHMFYLSFRNKTCSVILKEAYCDESAIENHPILRVRKKYIKLM 372
K+ F LP KV+ +H +FY+S + + +V+L+E Y ++ +P++ V++K+ K+M
Sbjct: 277 KREFFLPDKVNVLLLKHHGIFYVSNKYRIYTVLLREGYVGSQLVDKNPLVAVKEKFGKIM 336
Query: 373 KES 375
+E
Sbjct: 337 QEG 339
>Medtr3g105530.1 | plant organelle RNA recognition domain protein |
HC | chr3:48661486-48663294 | 20130731
Length = 431
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 153/315 (48%), Gaps = 14/315 (4%)
Query: 70 VIALKNCITQDPNGCIPISAVS--KKGLQLDVPMKVARFLRQYPSIFEEFTGPQYNHPWF 127
++ L + Q+P IP+ ++S +K + L P +++ FLR+ P +FE + + W
Sbjct: 55 IVFLIELLEQEPEIVIPVRSLSHYRKQISLPKPHRISDFLRKTPKLFELYKD-RNGVLWC 113
Query: 128 RLTAEAAEIDRDEKRVYEECREDLRSRLRKMILMTKENVLPLKIIQGMLWYLGLPNDYLQ 187
LT +A + + KRV EE + + ++++M+ + + L I GLP D+
Sbjct: 114 GLTQKAEVLMEEHKRVIEENEDKAAEYVTRLLMMSVDKRVQLDKIAHFRRDFGLPMDFRT 173
Query: 188 YPEQNFDESFRFVE--MEDG--LKGLAVESREKVCSVMEKNAM-----KRGLYSGGAMEA 238
+ + + FR V+ ++D L+ ++ S + + +KN M ++ G + +
Sbjct: 174 HWVHKYPQLFRVVKPSLDDVEFLELVSWNSEWAITEIEKKNKMILEGVTETEHTPGLL-S 232
Query: 239 IEFPF-FPSNGLRLRRKIENWLHEFQKLPYISPYDDFSNLDPDSDIAEKRLVGFLHELLA 297
+ FP FP+N R+ + FQ+ Y+SPY D L P S +KR V +HELL+
Sbjct: 233 LPFPLKFPANFKRVHSYYGEKIKMFQERTYLSPYADAKGLKPGSLEFDKRAVAVMHELLS 292
Query: 298 LFVEHSAERRKLFCLKKHFGLPQKVHKAFERHPHMFYLSFRNKTCSVILKEAYCDESAIE 357
VE L + +PQK+ + +H +FY+S R K SV L EAY IE
Sbjct: 293 FTVEKRLVTDHLTHFRWELVMPQKLMRLLLKHCGIFYVSERGKRFSVFLTEAYEGSELIE 352
Query: 358 NHPILRVRKKYIKLM 372
P+ R+K + L+
Sbjct: 353 KSPLFLWREKLLSLV 367
>Medtr3g063230.1 | plant organelle RNA recognition domain protein |
HC | chr3:28611519-28613057 | 20130731
Length = 425
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 144/317 (45%), Gaps = 15/317 (4%)
Query: 70 VIALKNCITQDP-NGCIPISAVSKKGLQLDVPMKVARFLRQYPSIFEEFTGPQYNHPWFR 128
VIA+ + I +P N + + +S +L + FLR++P IF + P P+ R
Sbjct: 71 VIAVHDLILANPKNRSVSVDFLSNLSQRLHLNRGATAFLRKFPHIFNIYYEPSKLQPFCR 130
Query: 129 LTAEAAEIDRDEKRVYEECREDLRSRLRKMILMTKENVLPLKIIQGMLWYLGLPNDYLQY 188
LT A ++ R E + RL +++ M+ +PL+ + + LGLP+D+ +
Sbjct: 131 LTDAALDVSRQEAEAINTSLPLVVERLVRILSMSASKTVPLRAVFKVWRELGLPDDFEES 190
Query: 189 PEQNFDESFRFVEMEDG----LKGLAVESREKVCSVMEKNAMKRGLYSGGAMEAIEFPF- 243
F+ + ++ LK + + +E + ++ ++E +
Sbjct: 191 VIAANSSVFQLCDADEQNTHLLKLVGDVPSSGFRAAVEDWRVVECCKDESSVNSMEMRYS 250
Query: 244 ----FPSNGLRLRRKIENWLHEFQKLPYISPYDDFSNLDPDSDIA----EKRLVGFLHEL 295
+P G+RL + + E+Q LPY+ PY+ S S EKR V +HE
Sbjct: 251 FKQRYPP-GMRLSKNFRANVKEWQSLPYMGPYEMVSEKKKTSKAGMMAMEKRAVSIVHEF 309
Query: 296 LALFVEHSAERRKLFCLKKHFGLPQKVHKAFERHPHMFYLSFRNKTCSVILKEAYCDESA 355
++L VE E K+ +K FG+ + F HP +FYLS + K +V L+EAY
Sbjct: 310 MSLTVEKMVEVEKISQFRKWFGIDFNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCL 369
Query: 356 IENHPILRVRKKYIKLM 372
I +P+ R++ + L+
Sbjct: 370 IHPNPVYDARRRLLDLV 386
>Medtr7g088530.1 | plant organelle RNA recognition domain protein |
HC | chr7:34489084-34490337 | 20130731
Length = 417
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 159/351 (45%), Gaps = 22/351 (6%)
Query: 51 KDSYYDSIEHIHQSIQLKPVIALKNCITQDPNGC-IPISAVSKKGLQLDVPMKVARFLRQ 109
+D+++D + + + L V+ +N I+ G + + +S+ + + V FL++
Sbjct: 48 RDTHFDKLTTHFKKLSL--VLKTRNLISNRKRGSFVSLQLMSRWKNITGLNVTVTSFLQK 105
Query: 110 YPSIFEEFTGPQYNHPWFRLTAEAAEIDRDEKRVYEECREDLRSRLRKMILMTKENVLPL 169
YP +F F P + R+T + E+ E+ V + ++ R++K+++M+ L L
Sbjct: 106 YPHVFYLFVHPFRRNMCCRMTKKMKELILLEEVVVRQHEVEVVKRVKKLLMMSVNGTLHL 165
Query: 170 KIIQGMLWYLGLPNDYLQYPEQNFDESFRFVEME-------DGLKGLAVESREKVCSVME 222
++ + LGLP D+ + + + FR V++E D G+A + E
Sbjct: 166 HALRLIRRELGLPCDFRESILGRYSDEFRLVDLEIVALVGWDDELGMARVEEWREREYRE 225
Query: 223 KNAMKRGLYSGGAMEAIEFPFFPSNGLRLRRKIENWLHEFQKLPYISPYDDFSNLDPDSD 282
K + FP G ++ R L +Q+L Y PY+ +
Sbjct: 226 K-------WLSEFETKFAFPINFPTGFKIERGFREKLKGWQRLSYTKPYERKNVKCGGVQ 278
Query: 283 IAEKRLVGFLHELLALFVEHSAERRKLFCLKKHFGLPQKVHKAFERHPHMFYLSFRNKTC 342
EKR V LHELL+L VE E +L ++ F + V + RHP +FY+S +
Sbjct: 279 RYEKRAVAVLHELLSLTVEKMVEVDQLAHFRRDFDIEVNVRELLLRHPGIFYISTKGNAQ 338
Query: 343 SVILKEAYCDESAIENHPILRVRKKYIKLMKESKVILRNKRVNGRFSNCSE 393
+V L+EAY IE +P+ VR+ ++L V+L ++ ++C E
Sbjct: 339 TVFLREAYEKGGLIEPNPVYEVRRNMLEL-----VLLGRRKTKQLLASCDE 384
>Medtr6g033595.1 | plant organelle RNA recognition domain protein |
HC | chr6:10945964-10948263 | 20130731
Length = 466
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 164/347 (47%), Gaps = 39/347 (11%)
Query: 51 KDSYYDSIEHIHQSIQLKPVIALKNCITQDPNGCIPISAVSKKGLQLDVPMKVA-RFLRQ 109
+D YD+ I + + + V+ +N I +PN IPIS + + ++ A F+ +
Sbjct: 50 RDHGYDNYMEIEK--KTRKVLKFQNLILSEPNQSIPISRLETQAHRIGFTRHEAIAFILK 107
Query: 110 YPSIFEEFTGPQYNHPWFRLTAEAAEIDRDEKRVYEECREDLRSRLRKMILMTKENVLPL 169
+ +FE F P + RLT +A E+ + E +RLRKMI+M+ L L
Sbjct: 108 FLHVFEIFEHPVQRILFCRLTRKAILQIEQERLALADQVERAVTRLRKMIMMSNGLRLRL 167
Query: 170 KIIQGMLWYLGLPNDY-----LQYPE--------QNFDESFRFVEMEDGLKGLAVE-SRE 215
+ ++ LGLP+D+ L+YPE + ++ VE + L A+E +RE
Sbjct: 168 EHVRIARSALGLPDDFEYSVVLRYPEFFRLVDAKETRNKYIELVEFDPKLAKCAIEDARE 227
Query: 216 KVCSVMEKNAMKRGLYSGGAMEAIEFPF---FPSNGLRLRRKIENWLHEFQKLPYISPYD 272
+V G E I F F FP G ++ + + ++Q+LPY SPY+
Sbjct: 228 RVYR-----------ERGSEAEDIRFSFLIDFPP-GFKISKYFRIAMWKWQRLPYWSPYE 275
Query: 273 DFSNLDPDSDIAEKRL----VGFLHELLALFVEHSAERRKLFCLKKHFGLPQKVHKAFER 328
D D S A+KR+ V +HELL+L VE ++ + LP+K+ + +
Sbjct: 276 DVLGYDLRSIEAQKRMEKRAVATIHELLSLTVEKKITLERIAHFRMAMNLPKKLKEFLLQ 335
Query: 329 HPHMFYLSFR---NKTCSVILKEAYCDESAIENHPILRVRKKYIKLM 372
H +FY+S R K +V L+EAY +E + + R+K ++L+
Sbjct: 336 HQGIFYVSTRGNHGKLHTVFLREAYSKGELVEPNDLYLARRKLVELV 382
>Medtr8g102038.1 | plant organelle RNA recognition domain protein |
HC | chr8:42900320-42901238 | 20130731
Length = 238
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 100/185 (54%), Gaps = 9/185 (4%)
Query: 125 PWFRLTAEAAEIDRDEKRVYEE--CREDLRSRLRKMILMTKENVLPLKIIQGMLWYLGLP 182
P +LTA+A + ++E V+ RED RL +++++ P+ +I+ + W +GLP
Sbjct: 52 PRVKLTAQALALHKEEMEVHNSRTNREDAAQRLSRLLMLAGMARFPIYVIEKLKWDMGLP 111
Query: 183 NDYLQYPEQNFDESFRFVEMEDGLKG---LAVE----SREKVCSVMEKNAMKRGLYSGGA 235
+DY+ ++ + F +ED L G LA+E +E S +EK M +
Sbjct: 112 HDYVTTLLAHYPDYFDVCVVEDPLSGKEVLALEFVLWRKELSVSELEKRVMGFNYGADNR 171
Query: 236 MEAIEFPFFPSNGLRLRRKIENWLHEFQKLPYISPYDDFSNLDPDSDIAEKRLVGFLHEL 295
I+FP F L ++++ W+ +Q LPYISPY++ +LD +SD AEK V LHEL
Sbjct: 172 RYDIQFPMFLPKSFALEKRVKTWVEGWQTLPYISPYENAFHLDSNSDQAEKWSVAILHEL 231
Query: 296 LALFV 300
L+L V
Sbjct: 232 LSLLV 236
>Medtr3g030020.1 | plant organelle RNA recognition domain protein |
HC | chr3:9470357-9471627 | 20130731
Length = 373
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 22/275 (8%)
Query: 106 FLRQYPSIFEEFTGPQYNHPWFRLTAEAAEIDRDEKRVYEECREDLRSRLRKMILMTKEN 165
++ +YPS F Q++ LT E+ +E+ + + RL K+++ + N
Sbjct: 37 WISKYPSCF------QFHQDHVLLTKRMMELVHEEQSLKDSLESVFVPRLAKLLMFSLNN 90
Query: 166 VLPLKIIQGMLWYLGLPNDYLQYPEQNFDESFRFVEMEDGLKGLAVE----SREKVCSVM 221
L + I + LG P+DYL + + FR + + VE + + S +
Sbjct: 91 CLNVMKINEIKNSLGFPDDYLIGIVMKYPDLFRIRNESGRISSMVVELMKWNPDFSVSEV 150
Query: 222 EKNAMKRGLYSGGAMEAIEFPF-FPSNGLRLRRKIENWLHEFQKLPYISPYDDFSNLDPD 280
AMK G+ + F + PS+ ++ K EF+ +PY+SPY D L
Sbjct: 151 AALAMKNGV-------EVNFSYCLPSSWVKSLEK----FREFELVPYVSPYSDPRGLVEG 199
Query: 281 SDIAEKRLVGFLHELLALFVEHSAERRKLFCLKKHFGLPQKVHKAFERHPHMFYLSFRNK 340
S EKR VG +HELL+L + KL K+ F LP KV+ +HP +FY+S + +
Sbjct: 200 SKEMEKRNVGLVHELLSLTLWKKISIMKLGHFKREFFLPDKVNVLLLKHPGIFYVSNKYR 259
Query: 341 TCSVILKEAYCDESAIENHPILRVRKKYIKLMKES 375
+V+L+E Y ++ P++ V++K+ ++M+E
Sbjct: 260 IYTVLLREGYVGSQLVDKDPLVVVKEKFGEIMQEG 294
>Medtr3g063230.2 | plant organelle RNA recognition domain protein |
HC | chr3:28611460-28613057 | 20130731
Length = 401
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 135/315 (42%), Gaps = 35/315 (11%)
Query: 70 VIALKNCITQDP-NGCIPISAVSKKGLQLDVPMKVARFLRQYPSIFEEFTGPQYNHPWFR 128
VIA+ + I +P N + + +S +L + FLR++P IF + P P+ R
Sbjct: 71 VIAVHDLILANPKNRSVSVDFLSNLSQRLHLNRGATAFLRKFPHIFNIYYEPSKLQPFCR 130
Query: 129 LTAEAAEIDRDEKRVYEECREDLRSRLRKMILMTKENVLPLKII-------QGMLWYLGL 181
LT A ++ R E + RL +++ M+ +PL+ + + L L
Sbjct: 131 LTDAALDVSRQEAEAINTSLPLVVERLVRILSMSASKTVPLRAVFKLCDADEQNTHLLKL 190
Query: 182 PNDYLQYPEQNFDESFRFVEMEDGLKGLAVESREKVCSVMEKNAMKRGLYSGGAMEAIEF 241
D + E +R VE + V S+ + + K+ +
Sbjct: 191 VGDVPSSGFRAAVEDWRVVE--------CCKDESSVNSMEMRYSFKQ-----------RY 231
Query: 242 PFFPSNGLRLRRKIENWLHEFQKLPYISPYDDFSNLDPDSDIA----EKRLVGFLHELLA 297
P G+RL + + E+Q LPY+ PY+ S S EKR V +HE ++
Sbjct: 232 P----PGMRLSKNFRANVKEWQSLPYMGPYEMVSEKKKTSKAGMMAMEKRAVSIVHEFMS 287
Query: 298 LFVEHSAERRKLFCLKKHFGLPQKVHKAFERHPHMFYLSFRNKTCSVILKEAYCDESAIE 357
L VE E K+ +K FG+ + F HP +FYLS + K +V L+EAY I
Sbjct: 288 LTVEKMVEVEKISQFRKWFGIDFNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIH 347
Query: 358 NHPILRVRKKYIKLM 372
+P+ R++ + L+
Sbjct: 348 PNPVYDARRRLLDLV 362
>Medtr3g074730.1 | plant organelle RNA recognition domain protein |
HC | chr3:33769164-33767587 | 20130731
Length = 404
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 126/290 (43%), Gaps = 22/290 (7%)
Query: 74 KNCITQDPNGCIPISAVSKKGLQLDVPM--KVARFLRQYPSIFEEFTGPQYNHP----WF 127
KN ++ P + + K +L P K+A+ ++Q+P +F Y H WF
Sbjct: 80 KNYLSNQPEHVLQLDDAGKLHRELGFPRGRKIAKSIQQHPPLF-----LTYRHTDGKMWF 134
Query: 128 RLTAEAAEIDRDEKRVYEECREDLRSRLRKMILMTKENVLPLKIIQGMLWYLGLPNDYLQ 187
T E+ +EK + E D ++RK+++M++ + + L I + G+P+D+
Sbjct: 135 GFTDLMEELLAEEKSIMESMELDRVEKVRKLLMMSRFHRISLAKIHHVRNLFGIPDDFRD 194
Query: 188 YPEQNFDESFRFVEMEDGLKGLAVESREKV-------CSVMEKNAMKRGLYSGGAMEAIE 240
E+ + FR V+ ++ G V E V S +EK M + A
Sbjct: 195 RVEK-YPNYFRIVDDKNKDDGKKVRVLELVNWDPLLAVSAIEKEFM---VNEDDAKRKFT 250
Query: 241 FPFFPSNGLRLRRKIENWLHEFQKLPYISPYDDFSNLDPDSDIAEKRLVGFLHELLALFV 300
FP L L + E ++ LP +SPY D + D + AEK VG +HE L+L +
Sbjct: 251 FPVKHGKDLELGIEDERKMNLLNALPLVSPYSDGAKFDVWTLEAEKYRVGLIHEFLSLTL 310
Query: 301 EHSAERRKLFCLKKHFGLPQKVHKAFERHPHMFYLSFRNKTCSVILKEAY 350
E A L K+ F L + + + P FYL+ V LKE Y
Sbjct: 311 EKRASIHHLVEFKEEFSLTKHTYHMLVKQPRAFYLAGTEMNWVVFLKEGY 360
>Medtr0153s0070.2 | plant organelle RNA recognition domain protein |
HC | scaffold0153:34902-38440 | 20130731
Length = 335
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 134/276 (48%), Gaps = 14/276 (5%)
Query: 70 VIALKNCITQDPNGCIPISAVS--KKGLQLDVPMKVARFLRQYPSIFEEFTGPQYNHPWF 127
++ L + Q+P IP+ ++S +K + L P +++ FLR+ P +FE + + W
Sbjct: 62 IVFLIELLEQEPEIVIPVRSLSHYRKQISLPKPHRISDFLRKTPKLFELYKD-RNGVLWC 120
Query: 128 RLTAEAAEIDRDEKRVYEECREDLRSRLRKMILMTKENVLPLKIIQGMLWYLGLPNDYLQ 187
LT +A + + KRV EE + + ++++M+ + + L I GLP D+
Sbjct: 121 GLTQKAEVLMEEHKRVIEENEDKAAEYVTRLLMMSVDKRVQLDKIAHFRRDFGLPMDFRT 180
Query: 188 YPEQNFDESFRFVE--MEDG--LKGLAVESREKVCSVMEKNAM-KRGL----YSGGAMEA 238
+ + + FR V+ ++D L+ ++ S + + +KN M G+ ++ G + +
Sbjct: 181 HWVHKYPQLFRVVKPSLDDVEFLELVSWNSEWAITEIEKKNKMIMEGVTETEHTPGLL-S 239
Query: 239 IEFPF-FPSNGLRLRRKIENWLHEFQKLPYISPYDDFSNLDPDSDIAEKRLVGFLHELLA 297
+ FP FP+N R+ + FQ+ Y+SPY D L P S +KR V +HELL+
Sbjct: 240 LPFPLKFPANFKRVHSYYGEKIKMFQERTYLSPYADAKGLKPGSLEFDKRAVAVMHELLS 299
Query: 298 LFVEHSAERRKLFCLKKHFGLPQKVHKAFERHPHMF 333
VE L + +PQK+ + +H +F
Sbjct: 300 FTVEKRLVTDHLTHFRWELVMPQKLMRLLLKHCGIF 335
>Medtr0153s0070.1 | plant organelle RNA recognition domain protein |
HC | scaffold0153:36398-37624 | 20130731
Length = 373
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 127/260 (48%), Gaps = 14/260 (5%)
Query: 70 VIALKNCITQDPNGCIPISAVS--KKGLQLDVPMKVARFLRQYPSIFEEFTGPQYNHPWF 127
++ L + Q+P IP+ ++S +K + L P +++ FLR+ P +FE + + W
Sbjct: 32 IVFLIELLEQEPEIVIPVRSLSHYRKQISLPKPHRISDFLRKTPKLFELYKD-RNGVLWC 90
Query: 128 RLTAEAAEIDRDEKRVYEECREDLRSRLRKMILMTKENVLPLKIIQGMLWYLGLPNDYLQ 187
LT +A + + KRV EE + + ++++M+ + + L I GLP D+
Sbjct: 91 GLTQKAEVLMEEHKRVIEENEDKAAEYVTRLLMMSVDKRVQLDKIAHFRRDFGLPMDFRT 150
Query: 188 YPEQNFDESFRFVE--MEDG--LKGLAVESREKVCSVMEKNAM-----KRGLYSGGAMEA 238
+ + + FR V+ ++D L+ ++ S + + +KN M ++ G + +
Sbjct: 151 HWVHKYPQLFRVVKPSLDDVEFLELVSWNSEWAITEIEKKNKMIMEGVTETEHTPGLL-S 209
Query: 239 IEFPF-FPSNGLRLRRKIENWLHEFQKLPYISPYDDFSNLDPDSDIAEKRLVGFLHELLA 297
+ FP FP+N R+ + FQ+ Y+SPY D L P S +KR V +HELL+
Sbjct: 210 LPFPLKFPANFKRVHSYYGEKIKMFQERTYLSPYADAKGLKPGSLEFDKRAVAVMHELLS 269
Query: 298 LFVEHSAERRKLFCLKKHFG 317
VE +R +F + + G
Sbjct: 270 FTVEKRGKRFSVFLTEAYEG 289
>Medtr3g083350.1 | plant organelle RNA recognition domain protein |
HC | chr3:37619083-37621215 | 20130731
Length = 568
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 149/330 (45%), Gaps = 23/330 (6%)
Query: 60 HIHQSIQLKPVIALKNCITQDPNGCIPISAVSK--KGLQLDVPMKVARFLRQYPSIFEEF 117
H+ +++ V LK + P +PI +SK L L P + + +YPSIFE F
Sbjct: 65 HVVMRNRIRFVQKLKTLLLSKPKHFLPIKILSKCRAYLSLHKPRSLLSMIHRYPSIFELF 124
Query: 118 TGPQYNHPW----------FRLTAEAAEIDRDEKRVYEECREDLRSRLRKMILMTKENVL 167
T P P RLT AA + +E + L ++L+K+++++ L
Sbjct: 125 TIPWPPTPLNATKLYPQLCVRLTPAAAALAAEELNLKSSISTVLANKLQKLLMLSSHRRL 184
Query: 168 PLKIIQGMLWYLGLPNDYLQYPEQNFDESFRFVEMEDGLKGLAVESREKVCSVMEKNAMK 227
L + + LGLP ++ + + F+ V+ G + L + S + + + K
Sbjct: 185 LLAKLVHLAPDLGLPPNFRSRLCNDHPDKFKIVDTSYG-RALELVSWD---TNLAKPLPP 240
Query: 228 RGLYSGGAMEAIEFPFFP---SNGLRLRRKIENWLHEFQKLPYISPYDDFSNLDPDSDI- 283
R +S + F GL L+R ++L +F+++P + PY++ + I
Sbjct: 241 RESHSLDLIVDRPLKFKQLRLRKGLNLKRPHRDYLLKFEEMPEVCPYNNPAESSTKESIE 300
Query: 284 AEKRLVGFLHELLALFVEHSAERRKLFCLKKHFGLPQKVHKAFERHPHMFYLSFRNKTCS 343
AEKR + E+L + +E L +K FGLP K+ RHP +FY S + + S
Sbjct: 301 AEKRCCAVIREVLGMTIEKRTLIDHLTHFRKEFGLPNKLRGMIVRHPELFYTSLKGQRDS 360
Query: 344 VILKEAYCDESA--IENHPILRVRKKYIKL 371
V L E + DE +E +L ++ K++ L
Sbjct: 361 VFLVERF-DEKGNLLEKDEVLALQDKWMDL 389
>Medtr3g448960.1 | plant organelle RNA recognition domain protein |
HC | chr3:16485012-16487013 | 20130731
Length = 463
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 131/303 (43%), Gaps = 53/303 (17%)
Query: 81 PNGCIPISAVSKKGLQLDVPMKVARFLRQYPSIFEEFTGPQYNHPWFRLTAEAAEIDRDE 140
PN IPI + KK LD+ K ++ +YPS F Q++ LT ++ +E
Sbjct: 57 PNNQIPILTLQKKFKTLDLQGKALNWISKYPSCF------QFHQDHVLLTKRMMKLVHEE 110
Query: 141 KRVYEECREDLRSRLRKMILMTKENVLPLKIIQGMLWYLGLPNDYLQYPEQNFDESFRFV 200
+ + + RL K+++++ N L + I + GLP+DYL + + FR +
Sbjct: 111 QSLKDSLESVFVLRLAKLLMLSLNNCLNVMKINEIKNSFGLPDDYLIGIVAKYSDLFR-I 169
Query: 201 EMEDGLKGLAVESREK-----VCSVMEKNAMKRGLYSGGAMEAIEFPF---FPSNGLRLR 252
E G + V K S +E AMK G +E F PS+ ++
Sbjct: 170 RNESGRRSSMVVELMKWNPDFAVSEVEALAMKNG---------VEVNFSCCLPSSWVKSL 220
Query: 253 RKIENWLHEFQKLPYISPYDDFSNLDPDSDIAEKRLVGFLHELLALFVEHSAERRKLFCL 312
K EF+ +PY+SPY D L S EKR +G +HELL+L + KL
Sbjct: 221 EK----FREFELVPYVSPYSDPRRLVEGSKEMEKRNLGLVHELLSLTLWKKISIMKLGHF 276
Query: 313 KKHFGLPQKVHKAFERHPHMFYLSFRNKTCSVILKEAYCDESAIENHPILRVRKKYIKLM 372
KK +F+ +++E Y ++ +P++ V++K+ K+M
Sbjct: 277 KK----------------GVFF---------CLIREGYVGSQLVDKNPLVAVKEKFGKIM 311
Query: 373 KES 375
+E
Sbjct: 312 QEG 314
>Medtr2g067960.1 | plant organelle RNA recognition domain protein |
HC | chr2:28431693-28434356 | 20130731
Length = 431
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 150/320 (46%), Gaps = 27/320 (8%)
Query: 73 LKNCITQDPNGCIPISAVSKKGLQLDVPM-KVARFLRQYPSIFEEFTGPQYNHPWFRLTA 131
+ I + N IPI + ++ + + F+ ++P +FE F + RLT
Sbjct: 35 ISELILSELNQSIPIPRLETLAHRIGFTRHEASAFILKFPYVFEIFEHLVQRILFCRLTR 94
Query: 132 EAA-EIDRDEKRVYEECREDLRSRLRKMILMTKENVLPLKIIQGMLWYLGLPNDY----- 185
+ +I+++ + ++ + LRKMI+M+ L L+ ++ LGL +D+
Sbjct: 95 KTILQIEQERLALADQVGRTVTC-LRKMIMMSNGLRLRLEHVRIARSALGLRDDFEYLVV 153
Query: 186 LQYPEQNFDESFRFVEMEDGLKGLA--VESREKVCSVMEKNAMKRGLYS--GGAMEAIEF 241
L+YPE FR V+ ++ VE K+ + ++A +R +Y G E I F
Sbjct: 154 LRYPE-----FFRLVDAKETRNKYIELVEFDPKLATCAIEDARER-VYRERGSEAEDIRF 207
Query: 242 PFFPS--NGLRLRRKIENWLHEFQKLPYISPYDDFSNLDPDSDIAEKRL----VGFLHEL 295
F G ++ + + ++Q LPY SPY+D D S A+KR+ V +HEL
Sbjct: 208 SFLIDFLPGFKISKYFRIAMWKWQSLPYWSPYEDVWGYDLRSPEAQKRMEKRAVATIHEL 267
Query: 296 LALFVEHSAERRKLFCLKKHFGLPQKVHKAFERHPHMFYLSFR---NKTCSVILKEAYCD 352
L+L VE ++ + LP+K+ + +H +FY+S R K +V L+EAY
Sbjct: 268 LSLTVEKKITLERIAHFQMAMNLPKKLKEFLLQHQGIFYVSTRGNHGKLHTVFLREAYRK 327
Query: 353 ESAIENHPILRVRKKYIKLM 372
+E + + R+K +++
Sbjct: 328 GELVEPNDLYLARRKLAEVV 347