Miyakogusa Predicted Gene
- Lj6g3v1601950.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1601950.3 tr|G7K852|G7K852_MEDTR Transmembrane protein 45B
OS=Medicago truncatula GN=MTR_5g027180 PE=4
SV=1,79.14,0,DUF716,Protein of unknown function DUF716, TMEM45;
SUBFAMILY NOT NAMED,NULL; EPIDIDYMAL MEMBRANE PRO,CUFF.59786.3
(278 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g027180.1 | transmembrane 45B-like protein | HC | chr5:112... 412 e-115
Medtr5g027180.2 | transmembrane 45B-like protein | HC | chr5:112... 412 e-115
Medtr8g071150.1 | transmembrane 45B-like protein | HC | chr8:301... 363 e-101
Medtr8g071150.2 | transmembrane 45B-like protein | HC | chr8:301... 363 e-101
Medtr8g071140.1 | transmembrane 45B-like protein | LC | chr8:301... 305 3e-83
Medtr2g021690.1 | T1.3 protein | HC | chr2:7380379-7382066 | 201... 94 2e-19
Medtr4g068340.1 | T1.3 protein | HC | chr4:25626826-25625439 | 2... 93 3e-19
Medtr1g112160.1 | T1.3 protein | HC | chr1:50718071-50718826 | 2... 69 7e-12
Medtr1g112150.1 | T1.3 protein | LC | chr1:50712643-50713536 | 2... 65 7e-11
>Medtr5g027180.1 | transmembrane 45B-like protein | HC |
chr5:11271754-11267763 | 20130731
Length = 278
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 194/278 (69%), Positives = 219/278 (78%)
Query: 1 MGSFKGHALPGTLFFVVGVWHIWCSVVRYWRNPKTFRVRVWNPVPGFNGRLKHLELYVIA 60
MGSFKGHALPGTLFFVVGVWHIW S+VRY RNPK FRVR WNPVPGF+GRLK+LELYV+A
Sbjct: 1 MGSFKGHALPGTLFFVVGVWHIWASIVRYVRNPKMFRVRAWNPVPGFDGRLKYLELYVVA 60
Query: 61 IGAFIDMCIELFYSTHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVPL 120
IGAFID+C+E YSTHLKIFVGGVLNPSHMNDFEHSGML MFFI GVV +L+EKTRF+PL
Sbjct: 61 IGAFIDLCVEFLYSTHLKIFVGGVLNPSHMNDFEHSGMLLMFFIYGVVALLSEKTRFLPL 120
Query: 121 PEGXXXXXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFP 180
EG HST+HKGLEG YHTLLV+ IGLCILSS+AGALLP +FP
Sbjct: 121 QEGVLCFLAAMAFSAEYLLFSFHSTSHKGLEGYYHTLLVFQIGLCILSSIAGALLPNNFP 180
Query: 181 VDLCKGIAITLQGIWFYQTAFVLYGPMLPDGCKIRDNSITCHSDDSEVRGEXXXXXXXXX 240
DL GIA+ LQGIWFYQTAFVLYGPMLPDGCKI+DN I C+S DSE+RGE
Sbjct: 181 ADLSNGIALALQGIWFYQTAFVLYGPMLPDGCKIKDNKIMCNSVDSEIRGELLANFQLFV 240
Query: 241 XXXXXXXGTLASYAYAASKYGNSQVTNLHIIQEGLDQD 278
GT+A+Y +AAS+Y NS+V +LH IQ+GLDQ+
Sbjct: 241 AILAVLVGTVAAYVFAASRYANSEVNDLHTIQDGLDQN 278
>Medtr5g027180.2 | transmembrane 45B-like protein | HC |
chr5:11270980-11267763 | 20130731
Length = 278
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 194/278 (69%), Positives = 219/278 (78%)
Query: 1 MGSFKGHALPGTLFFVVGVWHIWCSVVRYWRNPKTFRVRVWNPVPGFNGRLKHLELYVIA 60
MGSFKGHALPGTLFFVVGVWHIW S+VRY RNPK FRVR WNPVPGF+GRLK+LELYV+A
Sbjct: 1 MGSFKGHALPGTLFFVVGVWHIWASIVRYVRNPKMFRVRAWNPVPGFDGRLKYLELYVVA 60
Query: 61 IGAFIDMCIELFYSTHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVPL 120
IGAFID+C+E YSTHLKIFVGGVLNPSHMNDFEHSGML MFFI GVV +L+EKTRF+PL
Sbjct: 61 IGAFIDLCVEFLYSTHLKIFVGGVLNPSHMNDFEHSGMLLMFFIYGVVALLSEKTRFLPL 120
Query: 121 PEGXXXXXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFP 180
EG HST+HKGLEG YHTLLV+ IGLCILSS+AGALLP +FP
Sbjct: 121 QEGVLCFLAAMAFSAEYLLFSFHSTSHKGLEGYYHTLLVFQIGLCILSSIAGALLPNNFP 180
Query: 181 VDLCKGIAITLQGIWFYQTAFVLYGPMLPDGCKIRDNSITCHSDDSEVRGEXXXXXXXXX 240
DL GIA+ LQGIWFYQTAFVLYGPMLPDGCKI+DN I C+S DSE+RGE
Sbjct: 181 ADLSNGIALALQGIWFYQTAFVLYGPMLPDGCKIKDNKIMCNSVDSEIRGELLANFQLFV 240
Query: 241 XXXXXXXGTLASYAYAASKYGNSQVTNLHIIQEGLDQD 278
GT+A+Y +AAS+Y NS+V +LH IQ+GLDQ+
Sbjct: 241 AILAVLVGTVAAYVFAASRYANSEVNDLHTIQDGLDQN 278
>Medtr8g071150.1 | transmembrane 45B-like protein | HC |
chr8:30189066-30192021 | 20130731
Length = 269
Score = 363 bits (933), Expect = e-101, Method: Compositional matrix adjust.
Identities = 171/264 (64%), Positives = 200/264 (75%)
Query: 1 MGSFKGHALPGTLFFVVGVWHIWCSVVRYWRNPKTFRVRVWNPVPGFNGRLKHLELYVIA 60
MGSF GH LPGTLF +VGVWHIWCSVVRY +PKTF+VR WNPVPGF GRLK+LELYVI+
Sbjct: 1 MGSFIGHILPGTLFLLVGVWHIWCSVVRYVSSPKTFQVRAWNPVPGFEGRLKYLELYVIS 60
Query: 61 IGAFIDMCIELFYSTHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVPL 120
IGAFID+C+EL +T LK FVGGVLN +++N+FEHSGML MF I GVV +L+EKTR++PL
Sbjct: 61 IGAFIDLCVELLVATQLKFFVGGVLNSTYLNNFEHSGMLLMFLIFGVVSLLSEKTRYIPL 120
Query: 121 PEGXXXXXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFP 180
PEG HS THKGLEG YH LL +LIGLCILSS+AGA+LPT FP
Sbjct: 121 PEGALCLIAATAFTAEYLLFNFHSATHKGLEGYYHVLLAFLIGLCILSSIAGAVLPTCFP 180
Query: 181 VDLCKGIAITLQGIWFYQTAFVLYGPMLPDGCKIRDNSITCHSDDSEVRGEXXXXXXXXX 240
VDL KGI ITLQGIWFYQTAFVL+GPMLP GC ++DN +TCHS +SEVRGE
Sbjct: 181 VDLSKGIGITLQGIWFYQTAFVLFGPMLPSGCSMKDNVVTCHSKESEVRGELLANVQLFS 240
Query: 241 XXXXXXXGTLASYAYAASKYGNSQ 264
GT+AS+ +AAS+YGN +
Sbjct: 241 AVLAVHVGTIASFGFAASRYGNFE 264
>Medtr8g071150.2 | transmembrane 45B-like protein | HC |
chr8:30189649-30192021 | 20130731
Length = 269
Score = 363 bits (933), Expect = e-101, Method: Compositional matrix adjust.
Identities = 171/264 (64%), Positives = 200/264 (75%)
Query: 1 MGSFKGHALPGTLFFVVGVWHIWCSVVRYWRNPKTFRVRVWNPVPGFNGRLKHLELYVIA 60
MGSF GH LPGTLF +VGVWHIWCSVVRY +PKTF+VR WNPVPGF GRLK+LELYVI+
Sbjct: 1 MGSFIGHILPGTLFLLVGVWHIWCSVVRYVSSPKTFQVRAWNPVPGFEGRLKYLELYVIS 60
Query: 61 IGAFIDMCIELFYSTHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVPL 120
IGAFID+C+EL +T LK FVGGVLN +++N+FEHSGML MF I GVV +L+EKTR++PL
Sbjct: 61 IGAFIDLCVELLVATQLKFFVGGVLNSTYLNNFEHSGMLLMFLIFGVVSLLSEKTRYIPL 120
Query: 121 PEGXXXXXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFP 180
PEG HS THKGLEG YH LL +LIGLCILSS+AGA+LPT FP
Sbjct: 121 PEGALCLIAATAFTAEYLLFNFHSATHKGLEGYYHVLLAFLIGLCILSSIAGAVLPTCFP 180
Query: 181 VDLCKGIAITLQGIWFYQTAFVLYGPMLPDGCKIRDNSITCHSDDSEVRGEXXXXXXXXX 240
VDL KGI ITLQGIWFYQTAFVL+GPMLP GC ++DN +TCHS +SEVRGE
Sbjct: 181 VDLSKGIGITLQGIWFYQTAFVLFGPMLPSGCSMKDNVVTCHSKESEVRGELLANVQLFS 240
Query: 241 XXXXXXXGTLASYAYAASKYGNSQ 264
GT+AS+ +AAS+YGN +
Sbjct: 241 AVLAVHVGTIASFGFAASRYGNFE 264
>Medtr8g071140.1 | transmembrane 45B-like protein | LC |
chr8:30184509-30186960 | 20130731
Length = 366
Score = 305 bits (781), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 146/249 (58%), Positives = 174/249 (69%)
Query: 14 FFVVGVWHIWCSVVRYWRNPKTFRVRVWNPVPGFNGRLKHLELYVIAIGAFIDMCIELFY 73
F G+WHIW SVVRY +PKTF+VRVWNPVPGF+GR+KHLELY I+IG FI +C+EL
Sbjct: 111 FLAFGLWHIWSSVVRYASSPKTFQVRVWNPVPGFHGRIKHLELYFISIGVFISLCVELLI 170
Query: 74 STHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVPLPEGXXXXXXXXXX 133
T LKIF GG+LN +++N+FEHSG + FI G V +L+E TR+V +PEG
Sbjct: 171 GTQLKIFDGGILNATYLNNFEHSGTMLFSFIFGFVTLLSENTRYVTVPEGALCFIFSTAF 230
Query: 134 XXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKGIAITLQG 193
HSTTH GLEG YH LL +L+ LCILS++AGALLPTSFPVDLC I ITLQG
Sbjct: 231 STEYILFYYHSTTHIGLEGYYHILLGFLVRLCILSTIAGALLPTSFPVDLCSSITITLQG 290
Query: 194 IWFYQTAFVLYGPMLPDGCKIRDNSITCHSDDSEVRGEXXXXXXXXXXXXXXXXGTLASY 253
IW YQTAFVLYGPML GC +RDN ITCHS++SE+ GE GT ASY
Sbjct: 291 IWLYQTAFVLYGPMLLAGCTMRDNIITCHSNESEIHGELLANFQLFFAVLVVLVGTTASY 350
Query: 254 AYAASKYGN 262
+AAS+YGN
Sbjct: 351 GFAASRYGN 359
>Medtr2g021690.1 | T1.3 protein | HC | chr2:7380379-7382066 |
20130731
Length = 318
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 12/237 (5%)
Query: 1 MGSFKGHALPGTLFFVVGVWHIWCSVVRYWRNPKTFRVRVWNPVPGFNGRLKHLELYVIA 60
MG+ GH PG F ++G+WH++ + + +NP ++ W P F K+LELY+I
Sbjct: 1 MGTLVGHVAPGFAFLILGLWHLFNHIKLHIKNPNSYISPTWFPTSKF----KYLELYLIM 56
Query: 61 IGAFIDMCIELFY--STHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFV 118
+ + +ELF + H G + H+++FEH+ + FF I+ +K
Sbjct: 57 LATTASISMELFIGPARHQPFDTDGTIPSYHLHNFEHALISMAFFAYAASSIILDKIE-N 115
Query: 119 PLPEGXXXXXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTS 178
HS H G EG YH LL L+ + + +++ G + S
Sbjct: 116 QAKLALTQFLASMAFFQQLLLFHLHSADHMGPEGQYHLLLQVLVFVSLSTTLLGIPMQKS 175
Query: 179 FPVDLCKGIAITLQGIWFYQTAFVLYGP-MLPDGCKIRDNS----ITCHSDDSEVRG 230
F V + ++I QG+W ++L+ P ++ GC + + C ++S R
Sbjct: 176 FLVSFVRSLSIFFQGLWLMVMGYMLWTPSLIAKGCFMNSEEGHKVVRCSDEESLHRA 232
>Medtr4g068340.1 | T1.3 protein | HC | chr4:25626826-25625439 |
20130731
Length = 293
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 109/242 (45%), Gaps = 18/242 (7%)
Query: 1 MGSFKGHALPGTLFFVVGVWHIWCSVVRYW-RNPKTFRVRVWNPVPGFNGRLKHLELYVI 59
M F H + G +G+WHI ++ Y + P F +R W + + KHLEL I
Sbjct: 1 MDLFIAHLVQGLALTFLGLWHIINTIKSYLVKGPSNFTIRFWYHFNTPHFKFKHLELVSI 60
Query: 60 AIGAFIDMCIELFYSTHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVP 119
+ + + +++ H +++FEH+ M + +LTE T +
Sbjct: 61 LSFSILAILMQILDFPHFHY-------AFKLDNFEHATMFIHLALFAGFSLLTELTDSLE 113
Query: 120 LPEGXXXXXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSF 179
L G HST H G EG YH LL ++ + +++S+A A+ P SF
Sbjct: 114 LFSGFVAILVSSVFSQELFLLHFHSTDHVGPEGHYHWLLQLIVFVSLIASLAAAVFPNSF 173
Query: 180 PVDLCKGIAITLQGIWFYQTAFVLYGP-MLPDGCKI---RDN------SITCHSDDSEVR 229
+ I++ QG WF F+LY P +P+GC + R++ ++TC S +++ R
Sbjct: 174 NAAIVLSISLIFQGCWFINMGFMLYIPTFVPEGCVMNLARESASEIHGAVTCGSKEADFR 233
Query: 230 GE 231
+
Sbjct: 234 AK 235
>Medtr1g112160.1 | T1.3 protein | HC | chr1:50718071-50718826 |
20130731
Length = 251
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Query: 83 GVLNPSHMNDFEHSGMLFMFFILGV-VIILTEKTRFVPLPEGXXXXXXXXXXXXXXXXXX 141
G + +H+++FEHS M F + +IL K+
Sbjct: 27 GTIPSNHLHNFEHSSMALSFLVYATFAMILDRKSTSTKSQNEITHLLAAIAFAQQFLLIH 86
Query: 142 XHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKGIAITLQGIWFYQTAF 201
HS H G+EG YH LL LI +C ++++ G P SF V + ++IT QG+W
Sbjct: 87 LHSRDHMGIEGQYHYLLQVLISICFVTTLMGIGYPMSFLVSFVRSVSITFQGLWLMFMGL 146
Query: 202 VLYGP-MLPDGCKIR---DNSITCHSDDSEV 228
+L+ P P GC + D + SD+ +
Sbjct: 147 MLFTPGFEPKGCFTKLEGDQYVVKCSDEKAL 177
>Medtr1g112150.1 | T1.3 protein | LC | chr1:50712643-50713536 |
20130731
Length = 297
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 98/243 (40%), Gaps = 27/243 (11%)
Query: 1 MGSFKGHALPGTLFFVVGVWHIWCSVVRYWRNPKTFRVRVWNPVPGFNGRLKHLELYVIA 60
M + +GH G +FFV+G WH++ + ++ + W P ++LELY I
Sbjct: 1 MIALEGHICMGFVFFVLGFWHLFNYLKLHFLCSSNTSLPFWFPTK----ISRYLELYFIV 56
Query: 61 IGAFIDMCIELFYSTHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIIL--------T 112
I E+F ++ G + +H++ EH+ + F I I+ T
Sbjct: 57 ASCAIFSAAEIFEASS-----NGTIPTNHIHQVEHTSITLSFLIYATFAIILDTKKSTIT 111
Query: 113 EKTRFVPLPEGXXXXXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAG 172
EKT++ HS +H G+EG YH L LI + +++ G
Sbjct: 112 EKTQY-----EITLLLAAIAFGQEFLLFHLHSRSHMGIEGQYHYCLQVLIMIGFFTTLMG 166
Query: 173 ALLPTSFPVDLCKGIAITLQGIWFYQTAFVLYGP-MLPDGCKIRDNS----ITCHSDDSE 227
P SF V + +++ QG++ VL P P GC + I C+ + +
Sbjct: 167 IGFPKSFLVCFLRSVSMIFQGLFIMFMGLVLSRPGYQPKGCFLEYEGDQLMIRCNDEKAM 226
Query: 228 VRG 230
R
Sbjct: 227 HRA 229