Miyakogusa Predicted Gene

Lj6g3v1588720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1588720.1 tr|D8LXP9|D8LXP9_BLAHO Singapore isolate B
(sub-type 7) whole genome shotgun sequence assembly,
scaf,35.32,8e-19,Rib_5-P_isom_A,Ribose 5-phosphate isomerase, type A;
seg,NULL; NagB/RpiA/CoA transferase-like,NULL; ,CUFF.59636.1
         (291 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g032540.1 | ribose-5-phosphate isomerase A | HC | chr2:122...   456   e-128
Medtr7g114900.1 | ribose-5-phosphate isomerase A | HC | chr7:474...   110   2e-24
Medtr7g114900.2 | ribose-5-phosphate isomerase A | HC | chr7:474...   110   2e-24
Medtr1g108440.1 | ribose-5-phosphate isomerase A | HC | chr1:490...   109   3e-24

>Medtr2g032540.1 | ribose-5-phosphate isomerase A | HC |
           chr2:12237722-12242093 | 20130731
          Length = 295

 Score =  456 bits (1172), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 222/260 (85%), Positives = 238/260 (91%)

Query: 32  VLRMVTRSCLDDSSALLRAAQYTVDTYVKSGMVVGLGSGHASGMAIQHLGRQLRTGNLKD 91
           V  M  RSCLDD+S+LL+AAQYTVDTYVKSGMVVGLGSGHASGMAIQHLGRQLR GNLKD
Sbjct: 36  VRMMPIRSCLDDTSSLLQAAQYTVDTYVKSGMVVGLGSGHASGMAIQHLGRQLRNGNLKD 95

Query: 92  IVGTPMSISSASEAAKAGIPLDTYQDSSQIDLAFDDADVIEEGTLVGIIGRRKLQGEESI 151
           +VG P S++SASEAAKAGIPLDTYQDSSQID+AFDDAD +EEGT V IIGRRKLQ EESI
Sbjct: 96  VVGIPTSVASASEAAKAGIPLDTYQDSSQIDIAFDDADGVEEGTFVAIIGRRKLQSEESI 155

Query: 152 IQEKSILNASNKLVFIIEENQYKRGLEGSIPVLIQSINWMATAEEIDDMFLGDAEVWRRP 211
           IQEKSILN +NKLVFIIEENQYK GLEGSIPVLIQS+NW+A AEEIDDMFLGDAEVWRRP
Sbjct: 156 IQEKSILNNANKLVFIIEENQYKGGLEGSIPVLIQSLNWLAAAEEIDDMFLGDAEVWRRP 215

Query: 212 SIGQAGPLGGNFPLVTREGHNVLDVIFTSPIVSLAEVAKSLNKVDGVVDHGVISKIPCTV 271
           +IGQAGPLGG+FPLVT EGHNVLDVIFTSPI SLAEVAK L+ VDGVVDHGVISK PCTV
Sbjct: 216 AIGQAGPLGGDFPLVTGEGHNVLDVIFTSPIPSLAEVAKILDNVDGVVDHGVISKTPCTV 275

Query: 272 VIASQKELNILDKLTADIVG 291
           VIAS   LN+LDKLTAD+VG
Sbjct: 276 VIASPNGLNVLDKLTADVVG 295


>Medtr7g114900.1 | ribose-5-phosphate isomerase A | HC |
           chr7:47437147-47436305 | 20130731
          Length = 280

 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 143/276 (51%), Gaps = 19/276 (6%)

Query: 12  TRLLLHSPTTLLGXXXXXSNVLRMVTRSCLDDSSALLRAAQYTVDTYVKSGMVVGLGSGH 71
           +RL L +P++L       S  ++ +T +  DD   L  AA   V+ YVKSGMV+GLG+G 
Sbjct: 21  SRLNLRTPSSLKLRTKPLSFSVKAITLTQ-DDLKKL--AADKAVE-YVKSGMVLGLGTGS 76

Query: 72  ASGMAIQHLGRQLRTGNLKDIVGTPMSISSASEAAKAGIPLDTYQDSSQIDLAFDDADVI 131
            +   +  LG  L +G L +I+G P S  +  +A   GIPL    D+ ++DLA D AD +
Sbjct: 77  TAAFVVSKLGELLNSGELTNIIGVPTSKRTEEQARSLGIPLSVLDDNPRLDLAIDGADEV 136

Query: 132 EEGTLVGIIGRRKLQGEESIIQEKSILNASNKLVFIIEENQYKRGLEGS---IPVLIQSI 188
           +    + ++  R      ++++EK +  AS+K V ++++ +   GL GS   +PV +   
Sbjct: 137 D--PFLNLVKGRG----GALLREKMVEAASDKFVVVVDDTKLVSGLGGSGLAMPVEVVQF 190

Query: 189 NWMATAEEIDDMFLGDAEVWRRPSIGQAGPLGGNFPLVTREGHNVLDVIFTSPIVSLAEV 248
            W      + ++F  +  V  +  + ++G      P VT   + ++D+ F +PI      
Sbjct: 191 CWKYNLIRLQELFKEEG-VDAKLRVDESGK-----PYVTDNSNYIVDLYFKTPIRDANAA 244

Query: 249 AKSLNKVDGVVDHGVISKIPCTVVIASQKELNILDK 284
              ++ ++GVV+HG+   +  +V+IA +  + + DK
Sbjct: 245 GAEISSLEGVVEHGLFLNMATSVIIAGKTGVEVKDK 280


>Medtr7g114900.2 | ribose-5-phosphate isomerase A | HC |
           chr7:47437147-47436305 | 20130731
          Length = 280

 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 143/276 (51%), Gaps = 19/276 (6%)

Query: 12  TRLLLHSPTTLLGXXXXXSNVLRMVTRSCLDDSSALLRAAQYTVDTYVKSGMVVGLGSGH 71
           +RL L +P++L       S  ++ +T +  DD   L  AA   V+ YVKSGMV+GLG+G 
Sbjct: 21  SRLNLRTPSSLKLRTKPLSFSVKAITLTQ-DDLKKL--AADKAVE-YVKSGMVLGLGTGS 76

Query: 72  ASGMAIQHLGRQLRTGNLKDIVGTPMSISSASEAAKAGIPLDTYQDSSQIDLAFDDADVI 131
            +   +  LG  L +G L +I+G P S  +  +A   GIPL    D+ ++DLA D AD +
Sbjct: 77  TAAFVVSKLGELLNSGELTNIIGVPTSKRTEEQARSLGIPLSVLDDNPRLDLAIDGADEV 136

Query: 132 EEGTLVGIIGRRKLQGEESIIQEKSILNASNKLVFIIEENQYKRGLEGS---IPVLIQSI 188
           +    + ++  R      ++++EK +  AS+K V ++++ +   GL GS   +PV +   
Sbjct: 137 D--PFLNLVKGRG----GALLREKMVEAASDKFVVVVDDTKLVSGLGGSGLAMPVEVVQF 190

Query: 189 NWMATAEEIDDMFLGDAEVWRRPSIGQAGPLGGNFPLVTREGHNVLDVIFTSPIVSLAEV 248
            W      + ++F  +  V  +  + ++G      P VT   + ++D+ F +PI      
Sbjct: 191 CWKYNLIRLQELFKEEG-VDAKLRVDESGK-----PYVTDNSNYIVDLYFKTPIRDANAA 244

Query: 249 AKSLNKVDGVVDHGVISKIPCTVVIASQKELNILDK 284
              ++ ++GVV+HG+   +  +V+IA +  + + DK
Sbjct: 245 GAEISSLEGVVEHGLFLNMATSVIIAGKTGVEVKDK 280


>Medtr1g108440.1 | ribose-5-phosphate isomerase A | HC |
           chr1:49010907-49013898 | 20130731
          Length = 268

 Score =  109 bits (273), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 122/241 (50%), Gaps = 14/241 (5%)

Query: 47  LLRAAQYTVDTYVKSGMVVGLGSGHASGMAIQHLGRQLRTGNLKDIVGTPMSISSASEAA 106
           L + A Y    YV+SGMV+GLG+G  +  A+  +G  +R G LK+I+G P S  +  +A 
Sbjct: 39  LKKIAAYKAVEYVESGMVLGLGTGSTAKHAVARIGELIRQGKLKNIIGIPTSTITHEQAV 98

Query: 107 KAGIPLDTYQDSSQIDLAFDDADVIEEGTLVGIIGRRKLQGEESIIQEKSILNASNKLVF 166
             GIPL        IDLA D AD ++   L  + GR       S+++EK +  A  K V 
Sbjct: 99  SLGIPLSDLDSHPVIDLAIDGADEVDP-YLNLVKGRGG-----SLLREKMVEGACKKFVC 152

Query: 167 IIEENQYKRGLEGS---IPVLIQSINWMATAEEIDDMFLGDAEVWRRPSIGQAGPLGGNF 223
           I++E++    L GS   +PV +    W  TA  + ++F     V +  + G+ G      
Sbjct: 153 IVDESKLVNYLGGSGLAMPVEVIRFCWKFTAGRLQNLFEESGCVAKLRTSGEKGE----- 207

Query: 224 PLVTREGHNVLDVIFTSPIVSLAEVAKSLNKVDGVVDHGVISKIPCTVVIASQKELNILD 283
           P VT  G+ ++D+ F   I  L   + ++  + GVV+HG+   +  TV++A +  L +  
Sbjct: 208 PYVTDNGNYIVDLYFKKSIGDLRVASDAILNIAGVVEHGMFLDMATTVIVAGELGLTVKS 267

Query: 284 K 284
           K
Sbjct: 268 K 268