Miyakogusa Predicted Gene

Lj6g3v1588710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1588710.1 Non Characterized Hit- tr|G7IQG3|G7IQG3_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,39.57,4e-16,
,CUFF.59635.1
         (153 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g032870.1 | hypothetical protein | LC | chr2:12395704-1239...   129   1e-30
Medtr2g032900.1 | transmembrane protein, putative | LC | chr2:12...   103   4e-23
Medtr2g032740.1 | hypothetical protein | LC | chr2:12339667-1233...    89   1e-18
Medtr2g045410.1 | hypothetical protein | LC | chr2:19937993-1993...    89   2e-18
Medtr2g032860.1 | transmembrane protein, putative | LC | chr2:12...    80   1e-15
Medtr2g032770.1 | transmembrane protein, putative | HC | chr2:12...    76   1e-14
Medtr2g032720.1 | hypothetical protein | LC | chr2:12327038-1232...    70   6e-13

>Medtr2g032870.1 | hypothetical protein | LC |
           chr2:12395704-12394937 | 20130731
          Length = 255

 Score =  129 bits (323), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/154 (48%), Positives = 100/154 (64%), Gaps = 10/154 (6%)

Query: 4   IGNFKDCDFYVSDA--EDRSGIAFRIAYKTAKQSKNNKELCASWGSMMCAMSAGRLRVPV 61
           +GN  D +FY+SDA  +  + +AF +AYK AK SKNNKELCA  GSM+C++  G LR  V
Sbjct: 53  MGNMTDINFYISDAKGDKTTDMAFCVAYKAAKDSKNNKELCACVGSMLCSVVPG-LRNSV 111

Query: 62  DLALNRIGLIPREVKLPSEAEKFNINVTDVPEMDWPSILVTFGCCILFLFQ---NKSFQN 118
           + ALN IG+ PR V LPS+A + +I V+D+P++DWPSILV FG CI  L +   N+    
Sbjct: 112 EEALNGIGIRPRFVSLPSQAHENSIVVSDLPQLDWPSILVMFGYCIFLLCKSNFNERMIG 171

Query: 119 ETLYMIYMCDHIRELQKTVGYDPASANLGELDFP 152
            T Y  Y+   IRELQ    +DP++    +LD P
Sbjct: 172 YTPYNNYIPTCIRELQAKARFDPSN----KLDIP 201


>Medtr2g032900.1 | transmembrane protein, putative | LC |
           chr2:12405558-12404534 | 20130731
          Length = 328

 Score =  103 bits (258), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/116 (51%), Positives = 78/116 (67%), Gaps = 5/116 (4%)

Query: 4   IGNFKDCDFYVSDAE-DRSGIAFRIAYKTAKQ--SKNNKELCASWGSMMCAMSAGRLRVP 60
           +GN  DC+FYV DA  D +G++FR+AY  AKQ  S NNK+LC   GS++C++  G  R  
Sbjct: 2   MGNMTDCNFYVLDATGDTTGLSFRVAYIGAKQYRSGNNKDLCDCVGSLLCSVVPG-FRNS 60

Query: 61  VDLALNRIGLIPREVKLPSE-AEKFNINVTDVPEMDWPSILVTFGCCILFLFQNKS 115
           V+ ALN IG  PR V LPS+ A + +I ++DV E+DW SILV FG  IL LFQ  S
Sbjct: 61  VEAALNGIGARPRFVSLPSQQAHQKDIVMSDVLELDWSSILVVFGYFILLLFQMDS 116


>Medtr2g032740.1 | hypothetical protein | LC |
           chr2:12339667-12338630 | 20130731
          Length = 345

 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 78/142 (54%), Gaps = 20/142 (14%)

Query: 12  FYVSDAEDRSGIAFRIAYKTAKQSKNN-KELCASWGSMMCAMSAGRLRVPVDLALNRIGL 70
           FYVSD   R G+AF  AY  A +S +   ELC + GSM+C +  G  R  V+ AL RIG+
Sbjct: 49  FYVSDVSKR-GMAFYSAYDAAVESMDTVGELCTNVGSMLCDVYDG-FRNFVEEALYRIGV 106

Query: 71  IPREVKLPSEAEKFNINVTDVPEMDWPSILVTFGCCILFLFQNKSFQNETLYMIYMCDHI 130
            P  + LPS+         D  E+ WP ILV F CCI+ L   K F +E  Y  +M + I
Sbjct: 107 RPVVLWLPSD---------DTAEVYWPFILVNFACCIIMLL--KKFTDEINYHTFMIEFI 155

Query: 131 RELQKTVGYDPASANLGELDFP 152
            EL++ +GYD       +LDFP
Sbjct: 156 NELKEIIGYD------ADLDFP 171


>Medtr2g045410.1 | hypothetical protein | LC |
           chr2:19937993-19938981 | 20130731
          Length = 315

 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 79/139 (56%), Gaps = 5/139 (3%)

Query: 9   DCDFYVSDAE-DRSGIAFRIAYK-TAKQSKNN-KELCASWGSMMCAMSAGRLRVPVDLAL 65
           D   Y+ D   D +G AFR  Y  TA   +NN KELC   GSM+C++  G  R  ++ AL
Sbjct: 2   DSTLYIPDETGDNTGFAFRSTYHATAMYHRNNDKELCTYVGSMLCSVVPG-FRNSIEEAL 60

Query: 66  NRIGLIPREVKLPSEAEKFNINVTDVPEMDWPSILVTFGCCILFLFQNKSF-QNETLYMI 124
           N IG+ PR + LPS+++  NI   + P +DWPSILV +G C L +F+   F ++   +  
Sbjct: 61  NGIGVRPRFISLPSQSQVHNIVEAEFPLLDWPSILVIYGYCFLTIFKLIKFDEDANSFRN 120

Query: 125 YMCDHIRELQKTVGYDPAS 143
            M   I EL+  VG  P++
Sbjct: 121 KMTKWISELRVKVGCAPSN 139


>Medtr2g032860.1 | transmembrane protein, putative | LC |
           chr2:12393542-12392508 | 20130731
          Length = 344

 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 72/131 (54%), Gaps = 16/131 (12%)

Query: 22  GIAFRIAYKTAKQSKNNKELCASWGSMMCAMSAGRLRVPVDLALNRIGLIPREVKLPSEA 81
           G+AF  +Y+ A QS + KELC + GSM+C +  G  R  V+ AL  IG+    V LPS+ 
Sbjct: 59  GMAFYESYEEAMQSSDYKELCTNVGSMLCDVYHG-FRSSVEEALYGIGVKTTVVWLPSD- 116

Query: 82  EKFNINVTDVPEMDWPSILVTFGCCILFLFQNKSFQNETLYMIYMCDHIRELQKTVGYDP 141
               I   D+    WP ILV FGC I+ L +N  F +E  +  +M   I EL++ +GYD 
Sbjct: 117 ---EITTEDIV---WPFILVNFGCIIIMLLKN--FTDERNFKTFMIKLISELKEIIGYD- 167

Query: 142 ASANLGELDFP 152
                 +LDFP
Sbjct: 168 -----ADLDFP 173


>Medtr2g032770.1 | transmembrane protein, putative | HC |
           chr2:12358132-12357040 | 20130731
          Length = 225

 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 3/112 (2%)

Query: 5   GNFKDCDFYVSDAED--RSGIAFRIAYKTAKQSKNNKELCASWGSMMCAMSAGRLRVPVD 62
           GN ++    ++  ED   +G+AF  AY   K SKN+KELC   GSM+C +     R PV+
Sbjct: 11  GNQEESSNALNQYEDDPTTGMAFSAAYDATKDSKNSKELCTYVGSMLCFV-VPEFRKPVE 69

Query: 63  LALNRIGLIPREVKLPSEAEKFNINVTDVPEMDWPSILVTFGCCILFLFQNK 114
            AL  IG+  R V LPS+A + N   + +P+++   ILV FG CI  LF  +
Sbjct: 70  AALKEIGVSLRFVSLPSQAHENNNVDSKLPQLNRFYILVIFGYCIFLLFNAR 121


>Medtr2g032720.1 | hypothetical protein | LC |
           chr2:12327038-12325842 | 20130731
          Length = 398

 Score = 70.5 bits (171), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 7/121 (5%)

Query: 25  FRIAYKTAKQSKNNKELCASWGSMMCAMSAGRLRVPVDLALNRIGLIPREVKLPSEA-EK 83
           F  AYK A  S+NNKELC    +M+  +SA   + P   AL  IG+ P   +   +   +
Sbjct: 28  FTTAYKVAVVSENNKELCICVCAMITYVSA-EFQNPALTALGAIGIKPNAWRSTIDNYTR 86

Query: 84  FNINVT---DVPEMDWPSILVTFGCCILFLFQNKSFQNETLYMIYMCDHIRELQKTVGYD 140
           + I           DWPSILV FGCCI+ LF  K F  E  Y I+M + IREL+     D
Sbjct: 87  WGIQTYAGYQTMNFDWPSILVYFGCCIIVLF--KEFTTEESYNIFMTNSIRELRVRAKCD 144

Query: 141 P 141
           P
Sbjct: 145 P 145