Miyakogusa Predicted Gene

Lj6g3v1574600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1574600.1 Non Characterized Hit- tr|D8SGJ5|D8SGJ5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,50,6e-16,Complex1_LYR_1,Complex 1 LYR protein,CUFF.59628.1
         (85 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g032700.1 | complex 1 protein, LYR family protein | HC | c...   158   9e-40

>Medtr2g032700.1 | complex 1 protein, LYR family protein | HC |
          chr2:12314059-12310408 | 20130731
          Length = 95

 Score =  158 bits (400), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 72/85 (84%), Positives = 80/85 (94%)

Query: 1  MPSLQTALPPELANNAIRLYRECLRRAKYIGQWNYNTELLVDMVRQQFKKNIHETDPEKI 60
          MP+LQT+LPPELANNAIRLYRECLRRAKYIG   +NT+LLVDMVRQQFKKN+HETDP+K+
Sbjct: 1  MPTLQTSLPPELANNAIRLYRECLRRAKYIGHRQHNTQLLVDMVRQQFKKNLHETDPDKV 60

Query: 61 QKFKDDAARGLINHILYESETMSGR 85
          QK KDDAARGLINHILYESE +SGR
Sbjct: 61 QKLKDDAARGLINHILYESEKISGR 85