Miyakogusa Predicted Gene

Lj6g3v1538090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1538090.1 Non Characterized Hit- tr|B8LMP5|B8LMP5_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,39.84,6e-19,seg,NULL,CUFF.59589.1
         (221 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g034760.1 | Novel family | HC | chr2:13321067-13323053 | 2...   218   3e-57
Medtr1g083900.1 | Novel family | HC | chr1:37369158-37367841 | 2...   130   1e-30

>Medtr2g034760.1 | Novel family | HC | chr2:13321067-13323053 |
           20130731
          Length = 234

 Score =  218 bits (556), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 98/128 (76%), Positives = 117/128 (91%), Gaps = 3/128 (2%)

Query: 89  DPSQIVTKALLCFNDKYIYQSCEESYRLNENGNLEVPTEKTDEFCEGPCLSETNLVLSCI 148
           DPSQI++KALLCFNDKYIYQSCEESYRL ENGNL+VP+EKTD FCEGPC+SETNLVL CI
Sbjct: 103 DPSQIISKALLCFNDKYIYQSCEESYRLTENGNLDVPSEKTDAFCEGPCMSETNLVLGCI 162

Query: 149 DNIFSHFIFYNRATIQDIKETVQAGCGYGPQRGNFDVSEHLQAEESKALKATTTTSHVVM 208
           DNIFSHFIFYNRAT++D+KET+ AGCGYGP+RGNF+V+EH+QAEE++A+KA   TSHV+M
Sbjct: 163 DNIFSHFIFYNRATLEDVKETILAGCGYGPERGNFNVAEHIQAEENQAVKA---TSHVLM 219

Query: 209 GIALVITG 216
            +  +I G
Sbjct: 220 SLVFIIWG 227


>Medtr1g083900.1 | Novel family | HC | chr1:37369158-37367841 |
           20130731
          Length = 163

 Score =  130 bits (327), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 56/108 (51%), Positives = 76/108 (70%)

Query: 89  DPSQIVTKALLCFNDKYIYQSCEESYRLNENGNLEVPTEKTDEFCEGPCLSETNLVLSCI 148
           D  Q + KAL CF +K IY  C+++YRLN +GN+ VP E TD FC GPCL ET LVL CI
Sbjct: 34  DGGQDIVKALSCFENKLIYAGCDDAYRLNPSGNIRVPPEATDFFCSGPCLIETQLVLECI 93

Query: 149 DNIFSHFIFYNRATIQDIKETVQAGCGYGPQRGNFDVSEHLQAEESKA 196
           DN+ S+FIFYN+AT+Q ++  + +GC Y  QRGNF++  ++  E + A
Sbjct: 94  DNMLSNFIFYNKATVQQMRYALNSGCSYSRQRGNFNLEGYIGGETNNA 141