Miyakogusa Predicted Gene
- Lj6g3v1480340.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1480340.1 tr|B9HKI3|B9HKI3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_820184 PE=4
SV=1,37.12,3e-18,FAMILY NOT NAMED,NULL; no description,TRAF-type;
meprin and TRAF homology,MATH; MATH,MATH; TRAF doma,gene.g66282.t1.1
(298 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g107200.1 | MATH (meprin and TRAF-C-like) domain protein |... 234 6e-62
Medtr8g011730.1 | MATH domain protein | LC | chr8:3242928-324428... 217 9e-57
Medtr1g042160.2 | MATH domain protein | HC | chr1:15824709-15827... 182 2e-46
Medtr1g042160.1 | MATH domain protein | HC | chr1:15824760-15827... 182 2e-46
Medtr7g107160.1 | MATH domain protein | LC | chr7:43693556-43690... 179 2e-45
Medtr7g107170.1 | hypothetical protein | LC | chr7:43696455-4369... 158 6e-39
Medtr2g034780.1 | hypothetical protein | LC | chr2:13334670-1333... 117 1e-26
Medtr5g091180.1 | ubiquitin carboxyl-terminal hydrolase, putativ... 91 2e-18
Medtr3g079840.1 | ubiquitin carboxyl-terminal hydrolase-like pro... 89 4e-18
Medtr3g079840.2 | ubiquitin carboxyl-terminal hydrolase-like pro... 89 4e-18
Medtr1g041240.1 | ubiquitin carboxyl-terminal hydrolase-like pro... 86 4e-17
Medtr1g041240.2 | ubiquitin carboxyl-terminal hydrolase-like pro... 86 4e-17
Medtr1g041240.3 | ubiquitin carboxyl-terminal hydrolase-like pro... 86 5e-17
Medtr5g086700.2 | ubiquitin carboxyl-terminal hydrolase-like pro... 86 5e-17
Medtr5g086700.1 | ubiquitin carboxyl-terminal hydrolase-like pro... 86 5e-17
Medtr5g091450.1 | MATH (meprin and TRAF-C-like) domain protein |... 85 9e-17
Medtr5g091550.1 | ubiquitin carboxyl-terminal hydrolase | HC | c... 72 6e-13
Medtr5g091550.2 | ubiquitin carboxyl-terminal hydrolase | HC | c... 72 7e-13
Medtr3g106700.1 | CGS1 mRNA stability protein | HC | chr3:493155... 63 3e-10
Medtr8g011750.1 | hypothetical protein | LC | chr8:3238767-32396... 60 2e-09
Medtr1g073800.1 | meprin and TRAF (MATH)-like domain protein | H... 58 1e-08
Medtr1g044450.2 | meprin and TRAF (MATH)-like domain protein | H... 55 9e-08
Medtr1g044450.1 | meprin and TRAF (MATH)-like domain protein | H... 55 9e-08
Medtr1g073790.2 | meprin and TRAF (MATH)-like domain protein | H... 53 3e-07
Medtr1g073790.1 | meprin and TRAF (MATH)-like domain protein | H... 53 3e-07
Medtr2g096285.1 | hypothetical protein | LC | chr2:41126970-4112... 53 3e-07
Medtr4g123750.1 | BTB/POZ and MATH domain protein | HC | chr4:51... 51 2e-06
Medtr3g062340.1 | NB-ARC domain disease resistance protein | LC ... 48 9e-06
>Medtr7g107200.1 | MATH (meprin and TRAF-C-like) domain protein | LC
| chr7:43710995-43709256 | 20130731
Length = 378
Score = 234 bits (598), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 139/374 (37%), Positives = 201/374 (53%), Gaps = 81/374 (21%)
Query: 1 MVEKFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGN-DSDDCLSLYLYAGDL 59
+ EKF+W + F++ + S +++ SE F + G+P W++++YP GN D+ + +S+YL D
Sbjct: 10 LFEKFSWKVEKFARVS-SIQKVYSEPFVLCGYP-WRILVYPYGNGDNTNSMSIYL---DT 64
Query: 60 SIFPNDW---SIFANFNLALINQVYSQKTITK---------------------VEFNNAS 95
PN + + F L + NQ S +I + VE +N
Sbjct: 65 MQSPNSYQGGTRDVTFRLVVFNQFDSTMSIKQQTHHVFSERERDWGFTSFMPLVELHNHR 124
Query: 96 SGFIVNDTCIVEVEIAV---RKHEHVNQVDPAVCSEIIEHVA------------------ 134
GFIVND+CIV E+ V R +N+ + S + +
Sbjct: 125 LGFIVNDSCIVGAEVYVHNSRYENEMNRTGNLMASLLSNSITYGSHISGGHMEVPRPEAQ 184
Query: 135 -----------------------------SDGEVVDFKSFGKIEKAFIPLLDEVCSLHPS 165
S GE++DF G++E F+PLL++ CS HPS
Sbjct: 185 VPNLESLSEFPILVRTEPTRDIDMEFFKYSIGELMDFMGLGQVETYFVPLLEKACSQHPS 244
Query: 166 LIDCQQKRSRRFTEWAFTALGQVLHFLKSRKVKDMNADACSHLQALWEKLQTFNFELTWL 225
LI+CQQ+RSRRFTEWAFTALG+VL+FLK+RK KDMN AC LQ LWE+L+ F F+L WL
Sbjct: 245 LIECQQRRSRRFTEWAFTALGRVLYFLKTRKAKDMNDQACKDLQILWEELEIFGFDLAWL 304
Query: 226 QPHIRSALSMKSYIEKAQELKTMKENLATLEMETKSLKEKIFTAEVDLEIARRHLA-KGL 284
+PH++ AL MKSY+EK +++ +KEN + +E + LK K+ T EVDL IAR L +G
Sbjct: 305 EPHVQFALRMKSYVEKDVQMEMLKENAEGIALEMERLKTKLATLEVDLNIARDLLMEEGF 364
Query: 285 EERDLDAELAYGVP 298
DL+ EL YG+P
Sbjct: 365 NGIDLNVELGYGIP 378
>Medtr8g011730.1 | MATH domain protein | LC | chr8:3242928-3244284 |
20130731
Length = 356
Score = 217 bits (553), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 131/358 (36%), Positives = 193/358 (53%), Gaps = 78/358 (21%)
Query: 2 VEKFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDD---CLSLYLYAGD 58
+E+FTWTI NFSK + ++ S++F++ G+P W++++ PKGN+++ LS+ D
Sbjct: 12 IEQFTWTIKNFSK---CDSQMYSDSFFLNGYP-WRIVMNPKGNENNSGYLSLSILSVVAD 67
Query: 59 LSIFPNDWSIFANFNLALINQVYSQKTITKV---------------------EFNNASSG 97
++ F DW + N LAL NQ + TI K E +N +
Sbjct: 68 ITDFSKDWKRYVNLELALTNQANALLTIVKETEQELNASNYCWSVDKFIHLDELHNPWNA 127
Query: 98 FIVNDTCIVEVEI-AVRKHEH---VNQ--------VDPAVCSEI---IEHVASDGEVVDF 142
FIVNDTCI++ I +V +HE+ +NQ P EI V +VDF
Sbjct: 128 FIVNDTCIIKARIISVSEHEYERLINQEVSKMDSPAQPISVKEISLVPSCVNLCVNLVDF 187
Query: 143 KSFGKIEKAFIPLLDEVCSLHPSLID-------------CQQKRSR-----------RFT 178
+ GK++K F+PLL+E CS HPSL+ C RSR RFT
Sbjct: 188 RGLGKVDKKFVPLLEEACSWHPSLLGKVDNKFVPLIEEACSWHRSRVENQRKRKHTLRFT 247
Query: 179 EWAFTALGQVLHFLKSRKVKDMNADACSHLQALWEKLQTFNFELTWLQPHIRSALSMKSY 238
EWAFTALG+VLHFL +++VKDMN +AC+HLQ LWE+L+T F+L+WL+P+ SA+ KSY
Sbjct: 248 EWAFTALGRVLHFLNTKRVKDMNEEACNHLQILWEELETVGFDLSWLKPYFESAIDKKSY 307
Query: 239 IEKAQELKTMKENLATLEMETKSLKEKIFTAEVDLEIARRHLAKGLEERDLDAELAYG 296
++ + +++ + LE + +E++ AE K ERDLDA+L YG
Sbjct: 308 AQRYASVNRLRKTIEALESDHAKAREELIEAE-----------KEFVERDLDAKLGYG 354
>Medtr1g042160.2 | MATH domain protein | HC | chr1:15824709-15827639
| 20130731
Length = 309
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/317 (37%), Positives = 170/317 (53%), Gaps = 41/317 (12%)
Query: 1 MVEKFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSD-DCLSLYLYAGDL 59
+ EKFTW I NFS+ + ++L SE + + G+P W++ L+PKG+ S D L ++L A
Sbjct: 10 IFEKFTWKIENFSRL--NVDKLYSEPYVLSGYP-WRIALFPKGSSSAVDQLGIFLEAMKT 66
Query: 60 SIFPNDWSIFANFNLALINQVYSQKTITK---------------------VEFNNASSGF 98
+ W A F A+ NQV +TITK + GF
Sbjct: 67 ANMSEGWKRDAKFKFAVFNQVEDNRTITKETSQEFSASEDEWGYFSFMTLAALRDPGRGF 126
Query: 99 IVNDTCIVEVEIAVRKHEHVNQVDPAVCSEIIEHVASDGEVVDFKSFGKIEKAFIPLLDE 158
IVNDTCIV EI V K H Q++ V E+ E+ K + P ++
Sbjct: 127 IVNDTCIVGAEIFVCKSAHEKQINQTVKMEV--------ELPRPKPEDRG-----PNIET 173
Query: 159 VCSLHPSLIDCQQKRSRRFTEWAFTALGQVLHFLKSRKVKDMNADACSHLQALWEKLQTF 218
V + SL+ + + E F ALG+VL+FLK+RK +DMN AC LQ LWE+L F
Sbjct: 174 VSPVS-SLVFIEPTKDPD-AELVFAALGKVLYFLKTRKARDMNEQACKDLQVLWEELAKF 231
Query: 219 NFELTWLQPHIRSALSMKSYIEKAQELKTMKENLATLEMETKSLKEKIFTAEVDLEIARR 278
F++TWL+ H+ AL +K Y+EKA E + MKEN+ LE+E + LK K AE++L++ R
Sbjct: 232 KFDITWLESHVHYALGIKRYMEKALEAEKMKENMVVLELEMERLKVKSLAAEMNLDMERD 291
Query: 279 HL-AKGLEERDLDAELA 294
L +KG +E DLD+EL
Sbjct: 292 LLKSKGFKELDLDSELG 308
>Medtr1g042160.1 | MATH domain protein | HC | chr1:15824760-15827536
| 20130731
Length = 309
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/317 (37%), Positives = 170/317 (53%), Gaps = 41/317 (12%)
Query: 1 MVEKFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSD-DCLSLYLYAGDL 59
+ EKFTW I NFS+ + ++L SE + + G+P W++ L+PKG+ S D L ++L A
Sbjct: 10 IFEKFTWKIENFSRL--NVDKLYSEPYVLSGYP-WRIALFPKGSSSAVDQLGIFLEAMKT 66
Query: 60 SIFPNDWSIFANFNLALINQVYSQKTITK---------------------VEFNNASSGF 98
+ W A F A+ NQV +TITK + GF
Sbjct: 67 ANMSEGWKRDAKFKFAVFNQVEDNRTITKETSQEFSASEDEWGYFSFMTLAALRDPGRGF 126
Query: 99 IVNDTCIVEVEIAVRKHEHVNQVDPAVCSEIIEHVASDGEVVDFKSFGKIEKAFIPLLDE 158
IVNDTCIV EI V K H Q++ V E+ E+ K + P ++
Sbjct: 127 IVNDTCIVGAEIFVCKSAHEKQINQTVKMEV--------ELPRPKPEDRG-----PNIET 173
Query: 159 VCSLHPSLIDCQQKRSRRFTEWAFTALGQVLHFLKSRKVKDMNADACSHLQALWEKLQTF 218
V + SL+ + + E F ALG+VL+FLK+RK +DMN AC LQ LWE+L F
Sbjct: 174 VSPVS-SLVFIEPTKDPD-AELVFAALGKVLYFLKTRKARDMNEQACKDLQVLWEELAKF 231
Query: 219 NFELTWLQPHIRSALSMKSYIEKAQELKTMKENLATLEMETKSLKEKIFTAEVDLEIARR 278
F++TWL+ H+ AL +K Y+EKA E + MKEN+ LE+E + LK K AE++L++ R
Sbjct: 232 KFDITWLESHVHYALGIKRYMEKALEAEKMKENMVVLELEMERLKVKSLAAEMNLDMERD 291
Query: 279 HL-AKGLEERDLDAELA 294
L +KG +E DLD+EL
Sbjct: 292 LLKSKGFKELDLDSELG 308
>Medtr7g107160.1 | MATH domain protein | LC | chr7:43693556-43690971
| 20130731
Length = 447
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 177/336 (52%), Gaps = 57/336 (16%)
Query: 3 EKFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIF 62
E FTW + NFS++ SE F +GG+P W I K + D GDLSIF
Sbjct: 129 ETFTWNVENFSRWNGG---TYSEPFVLGGYP-WYAICMNKFSHEDTSYQWGDNVGDLSIF 184
Query: 63 ---------PNDWSIFANFNLALINQVYSQKTI----TKVEFNNAS-------------- 95
WS F L ++NQV S +TI + EF +S
Sbjct: 185 LSVVETANMSKGWSRHVKFKLFVLNQVDSNRTIFSDEAQHEFTASSNGWGVGSLVSSTVL 244
Query: 96 ----SGFIVNDTCIVEVEIAVRKHEHVNQVDPAVCSEIIEHVASDGEVVDFKSFGKIEKA 151
SGF+V D CIV VE++ K ++ QV+ A + E ++ +
Sbjct: 245 HDPHSGFLVKDVCIVGVEVSFYKSKYKKQVNQATSLTTSSTSSGQTENLEVE-------V 297
Query: 152 FIPLLDE--VCSLH---PSLIDCQQKRSRRFTEWAFTALGQVLHFLKSRKVKDMNADACS 206
P+L++ +C+LH PS +C +F EWAFTALG+VL+FLK+RK KDMN +CS
Sbjct: 298 TRPMLEKCVLCTLHLLSPSRKEC------KFREWAFTALGRVLYFLKTRKGKDMNDLSCS 351
Query: 207 -HLQALWEKLQTFNFELTWLQPHIRSALSMKSYIEKAQELKTMKENLATLEMETKSLKEK 265
LQ WE+LQ F F+L+WL+ H++SAL MKS++EK +E++ K+N+ LEME + L K
Sbjct: 352 MDLQIFWEELQPFGFDLSWLEYHVQSALGMKSFLEKMKEVEKQKDNVVALEMEKERLMAK 411
Query: 266 IFTAEVDLEIARRHL---AKGLEERDLDAELAYGVP 298
+ T V+L A+ L A+ LEE DLDAEL + P
Sbjct: 412 LATVNVNLYAAKDVLMLIAEDLEEIDLDAELGFVKP 447
>Medtr7g107170.1 | hypothetical protein | LC |
chr7:43696455-43695357 | 20130731
Length = 269
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 114/160 (71%), Gaps = 9/160 (5%)
Query: 138 EVVDFKSFGKIEKAFIPLLDEVCSLHPSLIDCQQKRSRRFTEWAFTALGQVLHFLKSRKV 197
E++DF S G++E+ + S +PSL + KRSR+FT+ AF ALG+V++FLK+RKV
Sbjct: 114 ELMDFSSVGQMEETY--------SDNPSLSERPSKRSRKFTDLAFAALGRVIYFLKTRKV 165
Query: 198 KDMNADACSHLQALWEKLQTFNFELTWLQPHIRSALSMKSYIEKAQELKTMKENLATLEM 257
+DMN AC LQ LWE+L+ F F++ WL PH++SAL +KSY+EKA E++ +K+N+A +E+
Sbjct: 166 RDMNDQACKDLQVLWEELEKFKFDMAWLDPHVQSALGIKSYVEKAVEVEKLKDNVAAVEL 225
Query: 258 ETKSLKEKIFTAEVDLEIARRHL-AKGLEERDLDAELAYG 296
E+ LK K+ A +L++ R L KG EERDLD+EL G
Sbjct: 226 ESGRLKAKLIAARANLDMERNLLKTKGFEERDLDSELGCG 265
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%)
Query: 200 MNADACSHLQALWEKLQTFNFELTWLQPHIRSALSMKSYIEKAQELKTMKENLATLEMET 259
MN AC LQ WE+L F F L WL H++SAL MK Y+EK E++ +K+N+ LE+E
Sbjct: 1 MNDLACKDLQIFWEELGPFGFYLIWLGLHVQSALGMKCYLEKLNEVEKLKDNVVALELEM 60
Query: 260 KSLKEKIFTAEVDLEIAR 277
+ LK K+ T E++L AR
Sbjct: 61 ERLKSKMATVEINLNAAR 78
>Medtr2g034780.1 | hypothetical protein | LC |
chr2:13334670-13335871 | 20130731
Length = 274
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 92/141 (65%), Gaps = 3/141 (2%)
Query: 140 VDFKSFGKIEKAFIPLLDEVCSLHPSLIDCQQKRSRRFTEWAFTALGQVLHFLKSRKVKD 199
+ G ++ ++PLL++VC++HP LI+CQ+KR+ ++ EWAFTALG+VL+FL+ KV +
Sbjct: 114 IKLNMLGNLDNVYVPLLEKVCNIHPCLIECQRKRTPKYVEWAFTALGRVLYFLEITKVDE 173
Query: 200 MNADACSHLQALWEKLQTFNFELTWLQPHIRSALSMKSYIEKAQELKTMKENLATLEMET 259
MN + LQ LW+++Q F F+L+WL P + +Y+EK ++ ++E +LE+
Sbjct: 174 MNEEEFEWLQLLWDEVQVFGFDLSWLAPQVEFLF---NYVEKMSKVNKLEEEKKSLEVRI 230
Query: 260 KSLKEKIFTAEVDLEIARRHL 280
+ L ++F E ++E ++ L
Sbjct: 231 QELSMELFEREKEMESSKGDL 251
>Medtr5g091180.1 | ubiquitin carboxyl-terminal hydrolase, putative |
LC | chr5:39731988-39738190 | 20130731
Length = 711
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 74/129 (57%), Gaps = 24/129 (18%)
Query: 4 KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFP 63
KFTW I FS +E +LCS+ F +GG+ W VI++P+G+++ D LS+Y D P
Sbjct: 46 KFTWRIERFS--WRNEIKLCSDVFDVGGYK-WHVIIFPEGDNAMDHLSMYFGVADSENLP 102
Query: 64 NDWSIFANFNLALINQVYSQKTITK---------------------VEFNNASSGFIVND 102
N WSI+A F ++L+NQ+ ++ ++TK E ++ S G++VN+
Sbjct: 103 NGWSIYAQFTMSLVNQINAEDSVTKDLRHRFNEQECDWGEPSFIPLDELSDPSRGYVVNN 162
Query: 103 TCIVEVEIA 111
T +VEVE+
Sbjct: 163 TLVVEVEVT 171
>Medtr3g079840.1 | ubiquitin carboxyl-terminal hydrolase-like
protein | HC | chr3:36048639-36064377 | 20130731
Length = 1119
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 80/132 (60%), Gaps = 25/132 (18%)
Query: 4 KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFP 63
+FTW I+NF++ + ++L SE F +G + W+V+++PKGN+ D LS+YL D + P
Sbjct: 57 RFTWRIDNFTRL--NTKKLYSEVFVVGAYK-WRVLIFPKGNNVD-YLSMYLDVADSTSLP 112
Query: 64 NDWSIFANFNLALINQVYSQKTI---TKVEFN------------------NASSGFIVND 102
WS +A F+LA++NQ++++ T+ T+ +FN + S G++VND
Sbjct: 113 YGWSRYAQFSLAIVNQIHNKFTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVND 172
Query: 103 TCIVEVEIAVRK 114
T I+E E+ VRK
Sbjct: 173 TLIIEAEVLVRK 184
>Medtr3g079840.2 | ubiquitin carboxyl-terminal hydrolase-like
protein | HC | chr3:36048376-36064377 | 20130731
Length = 1118
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 80/132 (60%), Gaps = 25/132 (18%)
Query: 4 KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFP 63
+FTW I+NF++ + ++L SE F +G + W+V+++PKGN+ D LS+YL D + P
Sbjct: 56 RFTWRIDNFTRL--NTKKLYSEVFVVGAYK-WRVLIFPKGNNVD-YLSMYLDVADSTSLP 111
Query: 64 NDWSIFANFNLALINQVYSQKTI---TKVEFN------------------NASSGFIVND 102
WS +A F+LA++NQ++++ T+ T+ +FN + S G++VND
Sbjct: 112 YGWSRYAQFSLAIVNQIHNKFTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVND 171
Query: 103 TCIVEVEIAVRK 114
T I+E E+ VRK
Sbjct: 172 TLIIEAEVLVRK 183
>Medtr1g041240.1 | ubiquitin carboxyl-terminal hydrolase-like
protein | HC | chr1:18377655-18355307 | 20130731
Length = 1119
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 26/134 (19%)
Query: 2 VEKFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSI 61
+ +FTWTI+NFS+ ++ S+ F +GG+ W+++++PKGN+++ LS+Y+ D
Sbjct: 57 IGRFTWTIDNFSRLP---KKHYSDVFTVGGYK-WRILIFPKGNNAEH-LSMYIDVADAGS 111
Query: 62 FPNDWSIFANFNLALINQVYSQKTITK---------------------VEFNNASSGFIV 100
P W+ FA F+L ++NQV+S+ ++ K E + S G++V
Sbjct: 112 MPYGWTRFAQFSLTVVNQVHSKYSVRKETQHQFNARESDWGFTNFMPLAELYDPSRGYVV 171
Query: 101 NDTCIVEVEIAVRK 114
D CI+E ++ VRK
Sbjct: 172 EDRCILEADVNVRK 185
>Medtr1g041240.2 | ubiquitin carboxyl-terminal hydrolase-like
protein | HC | chr1:18377688-18355186 | 20130731
Length = 1118
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 26/134 (19%)
Query: 2 VEKFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSI 61
+ +FTWTI+NFS+ ++ S+ F +GG+ W+++++PKGN+++ LS+Y+ D
Sbjct: 56 IGRFTWTIDNFSRLP---KKHYSDVFTVGGYK-WRILIFPKGNNAEH-LSMYIDVADAGS 110
Query: 62 FPNDWSIFANFNLALINQVYSQKTITK---------------------VEFNNASSGFIV 100
P W+ FA F+L ++NQV+S+ ++ K E + S G++V
Sbjct: 111 MPYGWTRFAQFSLTVVNQVHSKYSVRKETQHQFNARESDWGFTNFMPLAELYDPSRGYVV 170
Query: 101 NDTCIVEVEIAVRK 114
D CI+E ++ VRK
Sbjct: 171 EDRCILEADVNVRK 184
>Medtr1g041240.3 | ubiquitin carboxyl-terminal hydrolase-like
protein | HC | chr1:18377688-18355186 | 20130731
Length = 1117
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 26/134 (19%)
Query: 2 VEKFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSI 61
+ +FTWTI+NFS+ ++ S+ F +GG+ W+++++PKGN+++ LS+Y+ D
Sbjct: 55 IGRFTWTIDNFSRLP---KKHYSDVFTVGGYK-WRILIFPKGNNAEH-LSMYIDVADAGS 109
Query: 62 FPNDWSIFANFNLALINQVYSQKTITK---------------------VEFNNASSGFIV 100
P W+ FA F+L ++NQV+S+ ++ K E + S G++V
Sbjct: 110 MPYGWTRFAQFSLTVVNQVHSKYSVRKETQHQFNARESDWGFTNFMPLAELYDPSRGYVV 169
Query: 101 NDTCIVEVEIAVRK 114
D CI+E ++ VRK
Sbjct: 170 EDRCILEADVNVRK 183
>Medtr5g086700.2 | ubiquitin carboxyl-terminal hydrolase-like
protein | HC | chr5:37479368-37457121 | 20130731
Length = 1120
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 80/132 (60%), Gaps = 25/132 (18%)
Query: 4 KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFP 63
+FTW I+NFS+ + ++L S+ F +G + W+V+++PKGN+ D LS+YL D + P
Sbjct: 61 RFTWRIDNFSRV--NLKKLYSDVFVVGSYK-WRVLIFPKGNNVD-YLSMYLDVADSTSLP 116
Query: 64 NDWSIFANFNLALINQVYSQKTI---TKVEFN------------------NASSGFIVND 102
WS +A F+LA++NQ++++ T+ T+ +FN + S G+++ND
Sbjct: 117 YGWSRYAQFSLAVVNQIHNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLMND 176
Query: 103 TCIVEVEIAVRK 114
T I+E E+ VR+
Sbjct: 177 TLIIEAEVLVRR 188
>Medtr5g086700.1 | ubiquitin carboxyl-terminal hydrolase-like
protein | HC | chr5:37479517-37457082 | 20130731
Length = 1123
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 80/132 (60%), Gaps = 25/132 (18%)
Query: 4 KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFP 63
+FTW I+NFS+ + ++L S+ F +G + W+V+++PKGN+ D LS+YL D + P
Sbjct: 61 RFTWRIDNFSRV--NLKKLYSDVFVVGSYK-WRVLIFPKGNNVD-YLSMYLDVADSTSLP 116
Query: 64 NDWSIFANFNLALINQVYSQKTI---TKVEFN------------------NASSGFIVND 102
WS +A F+LA++NQ++++ T+ T+ +FN + S G+++ND
Sbjct: 117 YGWSRYAQFSLAVVNQIHNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLMND 176
Query: 103 TCIVEVEIAVRK 114
T I+E E+ VR+
Sbjct: 177 TLIIEAEVLVRR 188
>Medtr5g091450.1 | MATH (meprin and TRAF-C-like) domain protein | LC
| chr5:39868751-39863030 | 20130731
Length = 792
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 24/129 (18%)
Query: 4 KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFP 63
+FTW I FS + +L S+ F +GG+ W+V+L+PKGN+ D LS+YL D + P
Sbjct: 33 RFTWRIGGFSSI--NTIKLYSDVFEVGGYK-WRVLLFPKGNNVSDHLSMYLDVQDSANLP 89
Query: 64 NDWSIFANFNLALINQV---YSQKTITKVEFN------------------NASSGFIVND 102
N WS +A F+L ++NQ+ YS + T+ +FN + G+++ND
Sbjct: 90 NGWSSYAQFSLTVVNQINNKYSVRRDTQHQFNEQERDWGFTSLIRLGKLHDPRRGYLMND 149
Query: 103 TCIVEVEIA 111
T +VEVE+
Sbjct: 150 TLVVEVEVT 158
>Medtr5g091550.1 | ubiquitin carboxyl-terminal hydrolase | HC |
chr5:39914063-39909438 | 20130731
Length = 483
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 25/136 (18%)
Query: 2 VEKFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSI 61
++ +TW FS+ + L S+ F GG+ W+ I++P+GN++D LS+YL D +
Sbjct: 17 IQSYTWRTERFSRVRATV--LYSDVFEAGGYK-WRAIIHPRGNNTD-YLSIYLCTADSAS 72
Query: 62 FPNDWSIFANFNLALINQVYSQKTITKVEFN---------------------NASSGFIV 100
P+ WS + F L ++NQ+ + ++TKV + + S G++V
Sbjct: 73 LPDGWSSYVEFTLKVVNQIEYKYSVTKVAKHKFTKLISDWGHKNVIPLGILFDPSRGYLV 132
Query: 101 NDTCIVEVEIAVRKHE 116
NDT +VE+E+ + E
Sbjct: 133 NDTLVVEIEVTYSEDE 148
>Medtr5g091550.2 | ubiquitin carboxyl-terminal hydrolase | HC |
chr5:39914063-39909438 | 20130731
Length = 488
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 25/136 (18%)
Query: 2 VEKFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSI 61
++ +TW FS+ + L S+ F GG+ W+ I++P+GN++D LS+YL D +
Sbjct: 17 IQSYTWRTERFSRVRATV--LYSDVFEAGGYK-WRAIIHPRGNNTD-YLSIYLCTADSAS 72
Query: 62 FPNDWSIFANFNLALINQVYSQKTITKVEFN---------------------NASSGFIV 100
P+ WS + F L ++NQ+ + ++TKV + + S G++V
Sbjct: 73 LPDGWSSYVEFTLKVVNQIEYKYSVTKVAKHKFTKLISDWGHKNVIPLGILFDPSRGYLV 132
Query: 101 NDTCIVEVEIAVRKHE 116
NDT +VE+E+ + E
Sbjct: 133 NDTLVVEIEVTYSEDE 148
>Medtr3g106700.1 | CGS1 mRNA stability protein | HC |
chr3:49315548-49304426 | 20130731
Length = 1677
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 30/148 (20%)
Query: 2 VEKFTWTINNFSKFADSEEE-----LC--SETFYIGGHPLWQVILYPKGNDSDDC-LSLY 53
+ KFTW I NF++ D ++ LC S F IG ++I+YP+G C LS++
Sbjct: 404 IGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDC-RLIVYPRGQSQPPCHLSVF 462
Query: 54 LYAGDLSIFPNDWSIFANFNLALINQVYSQKTITKVEFNNAS------------------ 95
L D +DWS F + L+++NQ K++TK N S
Sbjct: 463 LEVTDSRNSSSDWSCFVSHRLSVVNQKTEDKSVTKESQNRYSKAAKDWGWREFVTLTSLF 522
Query: 96 ---SGFIVNDTCIVEVEIAVRKHEHVNQ 120
SGF+V DT I E+ + K + Q
Sbjct: 523 DQDSGFLVQDTVIFSAEVLILKETSIMQ 550
>Medtr8g011750.1 | hypothetical protein | LC | chr8:3238767-3239675
| 20130731
Length = 184
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 50/143 (34%)
Query: 158 EVCSLHPSLIDCQQKRSRRFT--EWAFTALGQVLHFLKSRKVKDMNADACSHLQALWEKL 215
+VCS + SL+D Q+KR R EW FTALG+VL+FL ++KVKDMN D
Sbjct: 90 KVCSWYQSLVDDQRKRKRTRRFTEWVFTALGRVLYFLNTKKVKDMNED------------ 137
Query: 216 QTFNFELTWLQPHIRSALSMKSYIEKAQELKTMKENLATLEMETKSLKEKIFTAEVDLEI 275
+ +K +++N+ +E + + ++++ AE
Sbjct: 138 -------------------------REANVKKLRKNVELIERDLATARKELIEAE----- 167
Query: 276 ARRHLAKGLEERDLDAELAYGVP 298
KG ERDLDA+L YG P
Sbjct: 168 ------KGFVERDLDAKLGYGAP 184
>Medtr1g073800.1 | meprin and TRAF (MATH)-like domain protein | HC |
chr1:32768339-32763615 | 20130731
Length = 451
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 4 KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFP 63
K+TW I F++ ++ EL S F +GG+ W +++YP+G D D LSL+L +
Sbjct: 49 KYTWKIEKFNQI--TKRELRSNAFEVGGYK-WYILIYPQGCDVSDHLSLFLCVANHDKLL 105
Query: 64 NDWSIFANFNLALINQ 79
WS FA F +A+IN+
Sbjct: 106 PGWSHFAQFTIAVINK 121
>Medtr1g044450.2 | meprin and TRAF (MATH)-like domain protein | HC |
chr1:16771154-16782814 | 20130731
Length = 1136
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 4 KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFP 63
K+TW I NFSK ++ EL S F +G + W +++YP+G D + LSL+L +
Sbjct: 65 KYTWKIENFSKI--TKRELRSNAFEVGNY-KWYILIYPQGCDVCNHLSLFLCVANHDKLL 121
Query: 64 NDWSIFANFNLALINQ 79
WS FA F +A++N+
Sbjct: 122 PGWSHFAQFTIAVVNK 137
>Medtr1g044450.1 | meprin and TRAF (MATH)-like domain protein | HC |
chr1:16770515-16782821 | 20130731
Length = 1136
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 4 KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFP 63
K+TW I NFSK ++ EL S F +G + W +++YP+G D + LSL+L +
Sbjct: 65 KYTWKIENFSKI--TKRELRSNAFEVGNY-KWYILIYPQGCDVCNHLSLFLCVANHDKLL 121
Query: 64 NDWSIFANFNLALINQ 79
WS FA F +A++N+
Sbjct: 122 PGWSHFAQFTIAVVNK 137
>Medtr1g073790.2 | meprin and TRAF (MATH)-like domain protein | HC |
chr1:32759046-32746070 | 20130731
Length = 1131
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 4 KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFP 63
K+TW I F++ ++ EL S F +GG+ W +++YP+G D + LSL+L +
Sbjct: 62 KYTWKIEKFNQI--TKRELRSNAFEVGGY-KWYILIYPQGCDVCNHLSLFLCVANHDKLL 118
Query: 64 NDWSIFANFNLALINQ 79
WS FA F +A++N+
Sbjct: 119 PGWSHFAQFTIAVVNK 134
>Medtr1g073790.1 | meprin and TRAF (MATH)-like domain protein | HC |
chr1:32759225-32746070 | 20130731
Length = 1131
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 4 KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFP 63
K+TW I F++ ++ EL S F +GG+ W +++YP+G D + LSL+L +
Sbjct: 62 KYTWKIEKFNQI--TKRELRSNAFEVGGY-KWYILIYPQGCDVCNHLSLFLCVANHDKLL 118
Query: 64 NDWSIFANFNLALINQ 79
WS FA F +A++N+
Sbjct: 119 PGWSHFAQFTIAVVNK 134
>Medtr2g096285.1 | hypothetical protein | LC |
chr2:41126970-41126581 | 20130731
Length = 94
Score = 53.1 bits (126), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 132 HVASDGEVVDFKSFGKIEKAFIPLLDEVCSLHPSLID 168
H + G ++DFK G+++KAF+PLL+E CS HPSL+D
Sbjct: 40 HFSKIGVLMDFKGLGQVDKAFVPLLEEACSHHPSLVD 76
>Medtr4g123750.1 | BTB/POZ and MATH domain protein | HC |
chr4:51005939-51007753 | 20130731
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 27/132 (20%)
Query: 4 KFTWTINNFSKFADSEEELC-SETFYIGGHPLWQVILYPKGNDSD--DCLSLYLYAGDLS 60
K W I +FSK + E C S+ F +G + WQ+ LYPKG +D L+LYL + +
Sbjct: 176 KHVWEIKDFSKL---DSECCDSKPFNVGNYK-WQIKLYPKGKATDLGRYLALYLTLANPT 231
Query: 61 IFPNDWSIFANFNLALINQVYSQKTITKVEFNNASS--------------------GFIV 100
P I+A L +++Q S+ K + ++S G++V
Sbjct: 232 TIPPGSKIYAQTILRILDQKQSKHQFWKANYWFSASSHEHGTSRFILCSNFTSQYLGYLV 291
Query: 101 NDTCIVEVEIAV 112
D C V+VE+ V
Sbjct: 292 KDICFVDVEVTV 303
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 38/201 (18%)
Query: 16 ADSEEELCSETFYIGGHPLWQVILYPKGNDSD---DCLSLYLYAGDLSIFPNDWSIFANF 72
+S E S F GGH W+++LYP GN S D +SLYL + S W I+ NF
Sbjct: 32 TNSIERYESGRFEAGGHK-WKLVLYPSGNKSKNVKDHISLYLALEESSSLHPGWEIYVNF 90
Query: 73 NLALINQ-----------VYSQKTITKV-------------EFNNASSGFIVNDTCIVEV 108
L + +Q V +K ++ +FN S G++++D C
Sbjct: 91 KLFVYDQNNDNYLVLQDDVKKEKRFHRMKVEWGFDQFIPLKDFNIGSKGYLLDDICAFGA 150
Query: 109 EIAVRKHEHVNQVDPAVCSEIIEHVASDGEVVDFKSFGKIEKAFIPLLDEVCSLHPSLID 168
E+ V + + + + + +++ V + K F K++ E C P +
Sbjct: 151 EVFVCRENYTGKGESLI---MMKDALPYKHVWEIKDFSKLD-------SECCDSKPFNVG 200
Query: 169 CQQKRSRRFTEWAFTALGQVL 189
+ + + + + T LG+ L
Sbjct: 201 NYKWQIKLYPKGKATDLGRYL 221
>Medtr3g062340.1 | NB-ARC domain disease resistance protein | LC |
chr3:28140012-28152822 | 20130731
Length = 1949
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 21/192 (10%)
Query: 122 DPAVCSEIIEHVASD----GEVVDFKSFGKIEKAFIPLLDEVCSLHPSLIDCQQKRSRRF 177
DP S+I E ++S GE+ + S + + LL + HPS++ S R+
Sbjct: 1761 DP---SQIDEDLSSSFVVTGELENLVSNNHLAIEKLSLLTDFLVKHPSVLLRDTSLSSRY 1817
Query: 178 TEWAFTALGQVLHFLKSRKVKDMNADACSHLQALWEKLQTFNFELTWLQ--------PHI 229
+A+ +L ++L FL++ V D+ + S L + ++ F F+ WL P +
Sbjct: 1818 KGYAYNSLAELLKFLQTHSVLDVLGSSNSEFVELLQDVRRFPFDKEWLDDVEMRALFPDL 1877
Query: 230 R-SALSMKSYIEKAQ----ELKTMKENLATLEMETKSLKEKIFTAEVDLEIARRHLAKGL 284
+ S +++ ++ Q E++ M+ + + LK ++ ++E DLE + AK L
Sbjct: 1878 QFSQNALQKLLDSEQRVTKEVEEMRLKINIFNQHLEDLKHQLTSSEADLETIIQQKAKIL 1937
Query: 285 EER-DLDAELAY 295
E + L A L Y
Sbjct: 1938 ETKAALSAPLGY 1949