Miyakogusa Predicted Gene

Lj6g3v1444540.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1444540.1 tr|C1N8I6|C1N8I6_MICPC Predicted protein
OS=Micromonas pusilla (strain CCMP1545)
GN=MICPUCDRAFT_3024,59.57,9e-19,seg,NULL;
coiled-coil,NULL,CUFF.59497.1
         (121 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g436860.1 | hypothetical protein | HC | chr2:14401447-1439...   190   2e-49

>Medtr2g436860.1 | hypothetical protein | HC |
           chr2:14401447-14397221 | 20130731
          Length = 148

 Score =  190 bits (483), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 95/106 (89%), Positives = 101/106 (95%)

Query: 15  TKENITPISSKIAELNESRSELLGRIQGLKQDLQGWRSKLDTQVKVYRDELSELKKTLNV 74
           TKENITPISSKIAELNESRSELLGRIQ LKQDLQGWRSKLDTQVKVYRDELS+LK+TLNV
Sbjct: 18  TKENITPISSKIAELNESRSELLGRIQSLKQDLQGWRSKLDTQVKVYRDELSDLKQTLNV 77

Query: 75  EVEQLRTEFQDLRTTLQQQQEDVTASLRNLGLQDVSADVKKAESQE 120
           EVEQLR EFQDLRTTLQQQQEDV ASLRN+ L+DVSAD K+A+SQE
Sbjct: 78  EVEQLRAEFQDLRTTLQQQQEDVNASLRNIRLEDVSADAKQAQSQE 123