Miyakogusa Predicted Gene

Lj6g3v1444510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1444510.1 Non Characterized Hit- tr|D8SQ60|D8SQ60_SELML
Putative uncharacterized protein OS=Selaginella moelle,46.49,4e-19,
,CUFF.59492.1
         (108 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g436880.1 | flowering-promoting factor-like protein | HC |...   168   1e-42
Medtr4g119790.1 | flowering-promoting factor-like protein | HC |...   147   2e-36
Medtr1g009900.1 | flowering-promoting factor-like protein | HC |...   135   7e-33
Medtr2g096990.1 | flowering-promoting factor-like protein | HC |...   109   7e-25

>Medtr2g436880.1 | flowering-promoting factor-like protein | HC |
           chr2:14419086-14418255 | 20130731
          Length = 112

 Score =  168 bits (425), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 89/113 (78%), Positives = 99/113 (87%), Gaps = 8/113 (7%)

Query: 1   MSGVWVFRNNGVMKLVENPGAEALESGRRR-----KVLVHTASNEVITSYAVLEHKLYSL 55
           MSGVWVF+N GV++LV+  G EA+E GR+      KVLVHTASNE+ITSYAVLE KL SL
Sbjct: 1   MSGVWVFKN-GVVRLVD--GVEAMEGGRQGSGGRRKVLVHTASNEIITSYAVLERKLSSL 57

Query: 56  GWERYYDDPDLLQFHKRSTVHLISLPRDFSRFKSMHMFDIVVKNKNSFEVRDM 108
           GWERYYDDPDLLQFHKRSTVHLISLP DF+RFKSMHM+DIVVKNKNSFEVR+M
Sbjct: 58  GWERYYDDPDLLQFHKRSTVHLISLPMDFNRFKSMHMYDIVVKNKNSFEVREM 110


>Medtr4g119790.1 | flowering-promoting factor-like protein | HC |
           chr4:49633553-49634198 | 20130731
          Length = 111

 Score =  147 bits (372), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 81/110 (73%), Positives = 93/110 (84%), Gaps = 4/110 (3%)

Query: 1   MSGVWVFRNNGVMKLVENPGAEALESGRRR--KVLVHTASNEVITSYAVLEHKLYSLGWE 58
           MSGVWVF+N GV++LVENPG E  ES   R  KVLV+T +NEVITSY++LE KL SLGWE
Sbjct: 1   MSGVWVFKN-GVVRLVENPGGEGGESSSGRSRKVLVYTPTNEVITSYSLLERKLQSLGWE 59

Query: 59  RYYDDPD-LLQFHKRSTVHLISLPRDFSRFKSMHMFDIVVKNKNSFEVRD 107
           RYYDDPD LLQFHKRSTV+LISLP+DF++ K MHM+DIVVKNKN F VRD
Sbjct: 60  RYYDDPDHLLQFHKRSTVYLISLPKDFNKLKPMHMYDIVVKNKNYFHVRD 109


>Medtr1g009900.1 | flowering-promoting factor-like protein | HC |
           chr1:1591062-1590188 | 20130731
          Length = 109

 Score =  135 bits (341), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 68/108 (62%), Positives = 82/108 (75%), Gaps = 2/108 (1%)

Query: 1   MSGVWVFRNNGVMKLVENPGAEALESGRRRKVLVHTASNEVITSYAVLEHKLYSLGWERY 60
           MSGVWVF+N GV +LVENP AE+     +RK+LVH  + EV+TSYA LE  L  LGWERY
Sbjct: 1   MSGVWVFKN-GVFRLVENPQAESEVRHGKRKMLVHLPTGEVVTSYAFLERILIGLGWERY 59

Query: 61  YD-DPDLLQFHKRSTVHLISLPRDFSRFKSMHMFDIVVKNKNSFEVRD 107
           YD D DL QFHK  ++ LISLP+DFS+F S+HM+DIV+KN N F VRD
Sbjct: 60  YDGDVDLYQFHKHCSIDLISLPKDFSKFNSIHMYDIVIKNPNVFHVRD 107


>Medtr2g096990.1 | flowering-promoting factor-like protein | HC |
           chr2:41468376-41467999 | 20130731
          Length = 125

 Score =  109 bits (272), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 56/122 (45%), Positives = 78/122 (63%), Gaps = 15/122 (12%)

Query: 1   MSGVWVFRNNGVMKLVENPGAEALE------------SGRRRKVLVHTASNEVITSYAVL 48
           MSGVWVF   GV++L+ NP  E+ E             G R +VLV+  +N+VI S++ L
Sbjct: 1   MSGVWVFDKKGVVRLITNPTRESFEHKTEPGTGTATAPGARPRVLVYLPTNQVIHSFSQL 60

Query: 49  EHKLYSLGWERYYDD--PDLLQFHKRST-VHLISLPRDFSRFKSMHMFDIVVKNKNSFEV 105
           E +L  LGW RY     PD +QFH+  T  HL+SLPR+F+ FK  HM+DIV++N++ F+V
Sbjct: 61  EQRLTELGWTRYSHSHLPDHIQFHRSDTSPHLLSLPRNFNSFKHFHMYDIVIQNRSFFQV 120

Query: 106 RD 107
           RD
Sbjct: 121 RD 122