Miyakogusa Predicted Gene

Lj6g3v1421150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1421150.1 Non Characterized Hit- tr|K3Y106|K3Y106_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si007868,30.91,2e-18,seg,NULL,CUFF.59478.1
         (356 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g437600.1 | hypothetical protein | HC | chr2:14789893-1479...   287   1e-77
Medtr8g070690.1 | hypothetical protein | LC | chr8:29854562-2985...   207   9e-54

>Medtr2g437600.1 | hypothetical protein | HC |
           chr2:14789893-14791388 | 20130731
          Length = 333

 Score =  287 bits (734), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 181/348 (52%), Positives = 213/348 (61%), Gaps = 38/348 (10%)

Query: 32  MESFQKEKQIMVDPLSLKDSHSPTKHLM------LPTVITNSGTAATLFHPPPLQPPTER 85
           ME FQKEKQIMVDPLSLK+S  P K +       LPT+IT   T++T+ HPP LQPP  R
Sbjct: 1   MEGFQKEKQIMVDPLSLKNS--PIKQMYNQETTKLPTIIT---TSSTILHPPTLQPPKLR 55

Query: 86  FXXXXXXXXXXXXXRFGSALXXXXXXXXXPEPKC--EASKFDNKLQDLLHEVHLGKSKSC 143
           F             RF S            E +C    +     LQDLL E   GKSKSC
Sbjct: 56  FLSLSLPNSVNSSPRFDSI---KKSNSGSLETQCLKSTNNVTTTLQDLLQEARFGKSKSC 112

Query: 144 GEARSLTPFEEFVSFDHWLSKTSAVEQVKLH-HDGKISKTEAVKESPKSNKSIKHMKTPE 202
           G+ R     EEF  FD WL+K S  E  K   H G  +K E VKESPK+   +K MKT  
Sbjct: 113 GDGRESASLEEF-DFDQWLTKLSTKELEKWEWHYGTFTKQEHVKESPKN--VVKQMKTTT 169

Query: 203 -NDGLKCSALCLYLPGFGGSKVKPVKTRKEGSKREA-VMSRTVSLENFECGSWASAAMFH 260
            +DG KC++LCL+LP F G K+KP+K RKE S++ A  MSR VSLENFECGSWASAAM H
Sbjct: 170 PHDGFKCNSLCLFLPNFVG-KIKPIKIRKEVSEKVAPTMSRNVSLENFECGSWASAAMSH 228

Query: 261 EIEGDSVNNYYFDLPIELMKHNSASEECSPV-----------KGVLKNSSSRGSARKSDT 309
           EI+GDS NN YFDLP+ELMK+ SA E  SP+           KGVLKN S+RGSARKS+ 
Sbjct: 229 EIDGDS-NNSYFDLPLELMKYGSAIEVDSPISSSLVYEKDQLKGVLKNGSARGSARKSEV 287

Query: 310 SSPRHHVRFTTXXXXXXXXXXXXX-CITPRLRKARDDFNSFLAAAQSA 356
            SPR HVRF+               CI+PRLRKAR+DFN+FLAAAQ+A
Sbjct: 288 -SPR-HVRFSLSSSSSPSYPASPAFCISPRLRKAREDFNTFLAAAQTA 333


>Medtr8g070690.1 | hypothetical protein | LC |
           chr8:29854562-29853609 | 20130731
          Length = 317

 Score =  207 bits (528), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 144/341 (42%), Positives = 189/341 (55%), Gaps = 45/341 (13%)

Query: 25  DYPIISIMESFQKEKQIMVDPLSLKDSHSPTKHLMLPTVITNSGTAATLFHPPPLQPPTE 84
           D+P+ +IME+ QK+KQ ++D LSLK+S     H    T              PPLQ    
Sbjct: 6   DFPV-TIMENLQKQKQNVMDALSLKES--SINHAFYDT-------------SPPLQLSKP 49

Query: 85  RFXXXXXXXXXXXXXRFGSALXXXXXXXXXPEPKCEASKFDNKLQDLLHEVHLGKSKSCG 144
           +               F S           P    +AS    K Q LL E+ L KSKSCG
Sbjct: 50  KSTSLSLPNSINSSPLFTSKRKSKGSVVESP---GQASNLTLKHQYLLKEIKLRKSKSCG 106

Query: 145 EAR-SLTPFEEFVSFDHWLSKTSAVEQ--VKLHHDGKISKTEAVKESPKSNKSIKHMKTP 201
           E R SL+PF+EF   DHWL K S VE     + H+   S+ EA+KE   ++     ++T 
Sbjct: 107 EGRASLSPFDEF---DHWLIKPSMVEHDYTNIKHES-FSENEAIKEHHTNDSD---LETN 159

Query: 202 ENDGLKCSALCLYLPGFGGSKVKPVKTRKEGSKREAVMSRTVSLENFECGSWASAAMFHE 261
             +G KCS LC++LPGFG  K K  KT+KEGS+ E  +SRTVSLE FECGSWAS+A+F++
Sbjct: 160 AEEGFKCSVLCMFLPGFG--KAKSAKTKKEGSEMEGTISRTVSLEKFECGSWASSALFND 217

Query: 262 IEGDSVNNYYFDLPIELMKHNSASEECSPV----------KGVLKNSSSRGSARKSDTSS 311
           IE D+ ++ YFDLP+EL+K +S ++  +PV          KGVLKN SSR +ARKSDTS 
Sbjct: 218 IETDNTSS-YFDLPLELIKGSSYNDVHAPVTSAFVFEKDLKGVLKNGSSRTNARKSDTSP 276

Query: 312 PRHHVRFTTXXXXXXXXXXXXXCITPRLRKARDDFNSFLAA 352
             +HVRF+T             C TP LR  + DFN+FL A
Sbjct: 277 --YHVRFST-SSTSHYSPSPASCNTPSLRNTKVDFNAFLEA 314