Miyakogusa Predicted Gene

Lj6g3v1417010.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1417010.1 tr|Q9SY32|Q9SY32_ARATH F17F8.27 OS=Arabidopsis
thaliana PE=4 SV=1,48.6,5e-18,seg,NULL; coiled-coil,NULL,CUFF.59472.1
         (665 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g437720.1 | zinc finger, C3HC4 type (RING finger) protein ...   430   e-120
Medtr4g094795.1 | zinc finger, C3HC4 type (RING finger) protein ...   195   1e-49

>Medtr2g437720.1 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr2:14865351-14860695 | 20130731
          Length = 915

 Score =  430 bits (1106), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 293/611 (47%), Positives = 351/611 (57%), Gaps = 82/611 (13%)

Query: 49  MASSQVEIASSSPFGCVLRDRNRRDGCRESTG-------FQKNIKNFVMDHLNTCISTIS 101
           MASS VEIA+SS FGCVLRDRN RDGCRES+        FQ+NIKNFVMDHLNT + T+S
Sbjct: 1   MASSGVEIATSSSFGCVLRDRNHRDGCRESSKVKATHAVFQRNIKNFVMDHLNTRV-TMS 59

Query: 102 SDSATNENKEQNQM----NNAAASWVSKPANSNNLARLRFKRXXXXXXXXXXXXXXX--X 155
           SDSATNEN  ++QM    NN  +SW SK   S NLARL  KR                  
Sbjct: 60  SDSATNENNNESQMKNNNNNNVSSWASK--GSTNLARLHLKRNNHNGIINNNKDNENEPS 117

Query: 156 XXXLISPRHSRLLDRWAAKQARQMVSTLENEEAELLAIDXXXXXXXXXXXXXXXXXXXXX 215
              LISPRHSRLLDRWAA+QAR+MVS LENE AELL+ID                     
Sbjct: 118 LASLISPRHSRLLDRWAARQAREMVSNLENE-AELLSIDDNTNNNNDMPAVVRTSSSTSD 176

Query: 216 XXXXAKTKLGASSLVQIWEKRLNKSSVSKPNTPIERXXXXXXXXX-------------IE 262
                K  +GASSLVQ+WEKRLN S+ SKPNTP+E+                      IE
Sbjct: 177 ECSSEKLNVGASSLVQLWEKRLNNSNGSKPNTPMEKTSPTGVTSATCNNENVFVVNTPIE 236

Query: 263 --------------ITFSVAEQSRVLETGETGECCELPSGNEEPFP-----DWESDKTGQ 303
                         +   V E+ R  E GE  E   L SGNEE F      DW+SDKTG 
Sbjct: 237 KTSPTGGASATCNNVNVFVVEEQRGSEIGEGFEG-PLSSGNEESFSFSSFTDWDSDKTG- 294

Query: 304 SSDQS-VXXXXXXXXXXXXXXXXXVANIIKRL----------QTQNDDNDHEGCGGTSSV 352
             DQS +                 VA+IIK+L           +  D+NDHEGCGG  SV
Sbjct: 295 --DQSRLCSVDQSRKNSSESDRVSVADIIKKLTATSQTQSSPPSSGDENDHEGCGG-GSV 351

Query: 353 ADSPS---AAENSEQRVFPQVTCTPRVRGRKAFDDLLMKLEQDRHGELKNLSERGAVSKF 409
           A SP    A E SEQR FPQVTC+ R+RGR+AF+DLLM+LE+DRHGELKNL+ERG VSKF
Sbjct: 352 ASSPRKDFAPELSEQRAFPQVTCSTRIRGRRAFNDLLMQLERDRHGELKNLAERGTVSKF 411

Query: 410 TQRGRIQASXXXXXXXXXXXXNEPYRLKSTASEVNR--QPAQGSAIMQLREKFSNGAEQR 467
            Q+GRIQA             N P   KST+SEV R  QP  GSAIMQLR  FS   E++
Sbjct: 412 AQKGRIQA-LLRLKLLRGAAANVPSHQKSTSSEVYRRVQP-HGSAIMQLRRNFSTRVEEK 469

Query: 468 KTVQAEVASPKSPHKEIANKTTQLDNSSSVDQINKDKSSKTSHGTANQSTESTQKSVSKT 527
            TVQAEVA+ +SP KEI N  TQL+NS++ DQI+KD S +  HGT +++ E T KS ++T
Sbjct: 470 NTVQAEVANTRSPPKEIVNNITQLENSTTADQISKDTSGQIVHGTVSRAIELT-KSETQT 528

Query: 528 SEDHKRQEAHPSSDITLQETRFEARYDVKQETAEATTSRPDSIPDERTDKAETSNQQHAM 587
           SE     E HPSS +  QET FEA++D  +E  E    + D    +   + E SNQ +A 
Sbjct: 529 SE-----EDHPSSTVMSQETCFEAQHDYSEE--EEINQQNDETSCDCAVEEEASNQNYA- 580

Query: 588 SKSSYEETLDE 598
            +SSYEE ++E
Sbjct: 581 -ESSYEEMVEE 590


>Medtr4g094795.1 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr4:39016144-39012687 | 20130731
          Length = 817

 Score =  195 bits (496), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 167/516 (32%), Positives = 236/516 (45%), Gaps = 68/516 (13%)

Query: 121 SWVSKPANSNNLARLRFKRXXXXXXXXXXXXXXXXXXXLISPRHSRLLDRWAAKQARQMV 180
           +WVS  A  N    L F +                   L+SPRHS+++DRWAA+QA+++ 
Sbjct: 16  TWVSSVAKKNKPGSLNFNKKFPNVFGDKNDSSLSA---LVSPRHSKIIDRWAARQAQEVA 72

Query: 181 STLE--NEEAELLAIDXXXXXXXXXXXXXXXXXXXXXXXXXAKTK---LGASSLVQIWEK 235
             LE  NE   +   D                            K   +GASSLVQ+WEK
Sbjct: 73  KNLEKNNENVVVKRFDNFPSRSSSFNSRRGSVSPPRSDGSSESEKTFNIGASSLVQMWEK 132

Query: 236 RLN-KSSVSKPNTPIERXXXXXXXXXIEITFSVAEQSRVLETGETGECCELPSGNEEPFP 294
           RLN +S+ +K N P             EI  S  E+    E GE+ +         E + 
Sbjct: 133 RLNNQSNCTKQNAP-SYVRTNSDASSNEINASSVEEP---EKGESSD---------EAYS 179

Query: 295 DWESDKTGQSSDQSVXXXXXXXXXXXXXXXXXVANIIKRLQTQNDDNDHEGCGGTSSVAD 354
             E DK   S D++                  VA+IIK+L   ND+NDHE    ++S   
Sbjct: 180 YGEYDKPRLSIDETCSPKVHYNLDAFKSEKIKVADIIKKLSVTNDENDHEQ---SNSATG 236

Query: 355 SPSAA---ENSEQRVFPQVTCTPRVRGRKAFDDLLMKLEQDRHGELKNLSERGAVSKFTQ 411
           SP  +   + +E R F QVT  PR+RGR+AF+DL+M+ E DRHGEL NL+ERGAVSKFTQ
Sbjct: 237 SPCISTPKQLAEHRGFGQVTSHPRIRGRQAFNDLIMQFECDRHGELNNLAERGAVSKFTQ 296

Query: 412 RGRIQASXXXXXXXXXXXXNEPYRLKSTASEVNRQPA-------------------QGSA 452
           RGRIQ+              +P  LK T  E N++ +                   QGS 
Sbjct: 297 RGRIQSLLRLRLLQRGVAAFDPSSLKLTTLEGNKKQSTTPEGNKKQSTTPEGNKKQQGSV 356

Query: 453 IMQLREKFSNGAEQRKTVQAEVASPKSPHKEIANKTTQLDNSSSVDQINKDKSSKTSHGT 512
           IMQLRE+F+   EQ+ +   EV+ P+S  +E  N T QL+   + +Q+NK+     S   
Sbjct: 357 IMQLRERFNTKDEQKTSSLIEVSEPRSIDRETINNTAQLNKFHTTNQLNKEIV--CSKIV 414

Query: 513 ANQSTESTQKS-VSKTSEDHKRQEAHPSSDITLQETRFEARYDVK----QETAEATTSRP 567
            N  T+  + + VS+T  D K            +E R    +D +    +E     +S+ 
Sbjct: 415 TNIHTKKNKLNVVSQTRADIK------------EEARIIYGFDPQNHGPKEIPVELSSKV 462

Query: 568 DSIPDERTDKAETSNQQ--HAMSKSSYEETLDELEA 601
           DS  ++ TDK E  +QQ    +  + Y E L+E E 
Sbjct: 463 DSNANDITDKVEARDQQLYDTIETNYYNEMLEEKEC 498