Miyakogusa Predicted Gene

Lj6g3v1414820.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1414820.1 tr|Q653D6|Q653D6_ORYSJ Molybdenum cofactor
sulfurase protein-like OS=Oryza sativa subsp. japonica
GN,61.04,2e-18,MOSC_N,MOSC, N-terminal beta barrel; MOLYBDOPTERIN
COFACTOR SULFURASE (MOSC),NULL; MOSC N-terminal d,CUFF.59484.1
         (141 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g035470.1 | Mo-molybdopterin cofactor sulfurase | HC | chr...   130   3e-31
Medtr2g035480.1 | Mo-molybdopterin cofactor sulfurase | HC | chr...   124   2e-29
Medtr2g035460.1 | Mo-molybdopterin cofactor sulfurase | HC | chr...   116   6e-27
Medtr2g035460.2 | Mo-molybdopterin cofactor sulfurase | HC | chr...    56   1e-08

>Medtr2g035470.1 | Mo-molybdopterin cofactor sulfurase | HC |
           chr2:15096715-15100323 | 20130731
          Length = 319

 Score =  130 bits (328), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 81/111 (72%), Gaps = 6/111 (5%)

Query: 15  LTITASATTTE--IPGGKVSDIFVYPIKSCRGISVSSAPFTPAGFRWDREWMVVNSRGKA 72
           +++ AS + TE   P  KVS IF+YP+KSCRGIS+S AP TP+GFRWDR+WMVVNS+G+A
Sbjct: 1   MSVAASKSVTESATPEAKVSGIFIYPVKSCRGISLSQAPLTPSGFRWDRQWMVVNSKGRA 60

Query: 73  ISQRNEPKLALVHVDLPNEAFAEDWQAPEDSFMGI----LHLLRVLLCKQF 119
            +QR EPKLALV V+ P EAF E W+   DSFM +    +  L+V L KQ+
Sbjct: 61  CTQRVEPKLALVEVEFPPEAFDEHWEPTTDSFMVLKAPGMEPLKVCLNKQY 111


>Medtr2g035480.1 | Mo-molybdopterin cofactor sulfurase | HC |
           chr2:15090768-15095115 | 20130731
          Length = 315

 Score =  124 bits (312), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 59/105 (56%), Positives = 77/105 (73%), Gaps = 4/105 (3%)

Query: 19  ASATTTEIPGGKVSDIFVYPIKSCRGISVSSAPFTPAGFRWDREWMVVNSRGKAISQRNE 78
            +A +T I   K+S IF+YPIKSCRGIS+S +P TP+G RWDR+W+VVNS+G+A +QR E
Sbjct: 2   GAAPSTSIAEAKISAIFIYPIKSCRGISLSHSPLTPSGLRWDRQWVVVNSKGRACTQRVE 61

Query: 79  PKLALVHVDLPNEAFAEDWQAPEDSFMGI----LHLLRVLLCKQF 119
           PKLALV V+LP EAF E W+   DSFM +    +  L+V L KQ+
Sbjct: 62  PKLALVEVELPPEAFDEHWEPTTDSFMVLKAPGMEPLKVFLNKQY 106


>Medtr2g035460.1 | Mo-molybdopterin cofactor sulfurase | HC |
           chr2:15100868-15106361 | 20130731
          Length = 324

 Score =  116 bits (291), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 52/98 (53%), Positives = 72/98 (73%), Gaps = 4/98 (4%)

Query: 27  PGGKVSDIFVYPIKSCRGISVSSAPFTPAGFRWDREWMVVNSRGKAISQRNEPKLALVHV 86
           P  KV+ +F+YP+KSCRGI +S+AP TP+GFRWDR+WMVVNS+G+A + R EP+ AL+ V
Sbjct: 19  PDAKVTGLFIYPVKSCRGIPLSNAPLTPSGFRWDRQWMVVNSKGRACTIRVEPRFALIDV 78

Query: 87  DLPNEAFAEDWQAPEDSFMGI----LHLLRVLLCKQFS 120
           +LP EAF + W+   DSFM +    +  L+V L KQ+ 
Sbjct: 79  ELPPEAFLQHWEPTTDSFMVLKAPGMEPLKVCLNKQYE 116


>Medtr2g035460.2 | Mo-molybdopterin cofactor sulfurase | HC |
           chr2:15101357-15106361 | 20130731
          Length = 269

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 4/61 (6%)

Query: 64  MVVNSRGKAISQRNEPKLALVHVDLPNEAFAEDWQAPEDSFMGI----LHLLRVLLCKQF 119
           MVVNS+G+A + R EP+ AL+ V+LP EAF + W+   DSFM +    +  L+V L KQ+
Sbjct: 1   MVVNSKGRACTIRVEPRFALIDVELPPEAFLQHWEPTTDSFMVLKAPGMEPLKVCLNKQY 60

Query: 120 S 120
            
Sbjct: 61  E 61