Miyakogusa Predicted Gene

Lj6g3v1412710.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1412710.1 tr|B2KZH0|B2KZH0_PICAB Quartet 3 (Fragment)
OS=Picea abies GN=QRT3 PE=2
SV=1,64.44,0.000000002,seg,NULL,gene.g66187.t1.1
         (192 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g035790.1 | polygalacturonase QRT3-like protein | HC | chr...   265   1e-71
Medtr4g094732.1 | polygalacturonase QRT3-like protein | HC | chr...   260   5e-70
Medtr2g035760.1 | polygalacturonase QRT3-like protein | HC | chr...   186   2e-47
Medtr6g015785.1 | polygalacturonase QRT3-like protein | HC | chr...   181   4e-46

>Medtr2g035790.1 | polygalacturonase QRT3-like protein | HC |
           chr2:15178610-15181077 | 20130731
          Length = 488

 Score =  265 bits (678), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 134/165 (81%), Positives = 144/165 (87%), Gaps = 2/165 (1%)

Query: 1   MITGVHCYNKATAFGGIGILVKLAGYSQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGGA 60
           +ITGVHCYNKAT FGGIGIL+KLAG SQTRIDNCYMDY  IVMEDPVQVHVT+GFFLG A
Sbjct: 297 IITGVHCYNKATGFGGIGILLKLAGNSQTRIDNCYMDYNSIVMEDPVQVHVTDGFFLGDA 356

Query: 61  NIVLKSIKGKVSGLNIVDNMFSGKW-NQVPIVALDGQFSSIDQVVIDRNNVYGSMSLRST 119
           NIVLKSIKGKV GLNIV+NMFSG   N VPIV LDG FS+IDQVVIDRNNV G M LRST
Sbjct: 357 NIVLKSIKGKVYGLNIVNNMFSGNPNNNVPIVKLDGGFSNIDQVVIDRNNVIG-MILRST 415

Query: 120 VSKLTVAGNGSKWVADFSNVLVFPNRISHFQYSFYSQGEPKFLAH 164
           V KL+V GNG+KWV DFSNVLVFPNRISHFQYSF++   PKF+AH
Sbjct: 416 VGKLSVDGNGTKWVGDFSNVLVFPNRISHFQYSFHTLEGPKFVAH 460


>Medtr4g094732.1 | polygalacturonase QRT3-like protein | HC |
           chr4:38860963-38858816 | 20130731
          Length = 480

 Score =  260 bits (665), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 126/165 (76%), Positives = 146/165 (88%), Gaps = 2/165 (1%)

Query: 1   MITGVHCYNKATAFGGIGILVKLAGYSQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGGA 60
           +++GVHCYNKA  FGGIGILVKLAG S TRIDNCYMDYTGIV EDPVQVHVTN  FLG A
Sbjct: 289 ILSGVHCYNKAAGFGGIGILVKLAGNSLTRIDNCYMDYTGIVTEDPVQVHVTNCLFLGDA 348

Query: 61  NIVLKSIKGKVSGLNIVDNMFSGKWN-QVPIVALDGQFSSIDQVVIDRNNVYGSMSLRST 119
           NI++K+ +G++ GLNIVDNMF+G  N +VPIV+L+GQFS++DQVVIDRNNV G M LRST
Sbjct: 349 NILIKAAEGQILGLNIVDNMFNGDPNKKVPIVSLEGQFSNVDQVVIDRNNVNG-MGLRST 407

Query: 120 VSKLTVAGNGSKWVADFSNVLVFPNRISHFQYSFYSQGEPKFLAH 164
           V KLTV+GNG+KW ADFS+VLVFPNRISH QYSFY+QGEPKF+AH
Sbjct: 408 VGKLTVSGNGTKWEADFSSVLVFPNRISHVQYSFYAQGEPKFVAH 452


>Medtr2g035760.1 | polygalacturonase QRT3-like protein | HC |
           chr2:15158916-15161418 | 20130731
          Length = 497

 Score =  186 bits (471), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/158 (58%), Positives = 117/158 (74%), Gaps = 4/158 (2%)

Query: 3   TGVHCYNKATAFGGIGILVKLAGYSQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGGANI 62
           +GVHCYNKAT FGG GI +KL G +QTRI N YMDYT IV EDPVQ+H+++ FFLG ANI
Sbjct: 303 SGVHCYNKATGFGGTGIYLKLPGLTQTRIVNSYMDYTSIVAEDPVQLHISSSFFLGDANI 362

Query: 63  VLKSIKGKVSGLNIVDNMFSGKWNQVPIVALD---GQFSSIDQVVIDRNNVYGSMSLRST 119
           VLKS+KG ++G+ IVDNMFSG    V ++ LD   G F  IDQV +DRN   G M+L++T
Sbjct: 363 VLKSMKGVLNGVTIVDNMFSGSNQGVEVIHLDKSNGPFHQIDQVTVDRNVATG-MNLKAT 421

Query: 120 VSKLTVAGNGSKWVADFSNVLVFPNRISHFQYSFYSQG 157
           V+K ++ GNG+ W  DF+N+L+FPN I + QYS  S G
Sbjct: 422 VAKRSLQGNGTSWNVDFNNILLFPNLIKNVQYSLSSTG 459


>Medtr6g015785.1 | polygalacturonase QRT3-like protein | HC |
           chr6:5462771-5458842 | 20130731
          Length = 494

 Score =  181 bits (459), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 92/160 (57%), Positives = 117/160 (73%), Gaps = 4/160 (2%)

Query: 2   ITGVHCYNKATAFGGIGILVKLAGYSQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGGAN 61
           I+GVHCYNKA+ FGG GI +KL G +QTRI N YMDYT IV EDPVQ+H+++ FFLG A 
Sbjct: 299 ISGVHCYNKASGFGGTGIYLKLPGLTQTRIVNSYMDYTNIVAEDPVQLHISSSFFLGDAK 358

Query: 62  IVLKSIKGKVSGLNIVDNMFSGKWNQVPIVALD---GQFSSIDQVVIDRNNVYGSMSLRS 118
           IVLKSIKG V+GLNIVDNMFSG  +   IV LD     F  IDQV + RN V G M+L++
Sbjct: 359 IVLKSIKGIVNGLNIVDNMFSGSNHGDEIVKLDTSISPFKQIDQVFVARNVVNG-MNLKA 417

Query: 119 TVSKLTVAGNGSKWVADFSNVLVFPNRISHFQYSFYSQGE 158
           T + +++ GNG+ W+ADF+ +L+FPN I + QYS  + G 
Sbjct: 418 TSAMISLHGNGTSWIADFNKILIFPNLIRNVQYSLSASGN 457