Miyakogusa Predicted Gene

Lj6g3v1392600.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1392600.1 tr|A4S0M9|A4S0M9_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901)
GN=OSTLU_24859,23.78,2e-18,seg,NULL,CUFF.59532.1
         (468 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g035830.1 | pigment defective 320 protein | HC | chr2:1520...   754   0.0  
Medtr8g009290.1 | pigment defective 320 protein, putative | HC |...   243   3e-64

>Medtr2g035830.1 | pigment defective 320 protein | HC |
           chr2:15204496-15199089 | 20130731
          Length = 468

 Score =  754 bits (1946), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/468 (76%), Positives = 400/468 (85%)

Query: 1   MRKLRWVMDGGAFWDLDVSTPKTLDGLACPVPEDPLPLGLSRGTRLSRPKQLHFMHTFMH 60
           MRKLRWVMDGG FWDLD+STPKTLDG ACPVPEDPL LGLSRGTRLSRP+QL FM  FM+
Sbjct: 1   MRKLRWVMDGGGFWDLDISTPKTLDGSACPVPEDPLTLGLSRGTRLSRPRQLQFMQLFMN 60

Query: 61  ALLLPSYAKPHGLTLQRVLSLPFSENWIVYLLGQFNLQRFVSSVKSSKETPEGFSSWLKN 120
           A L P++++P G +LQRVLSLPFS+NW V+LLGQFNLQ+FVSSVKSS E P  FSSWLKN
Sbjct: 61  APLHPTFSQPQGFSLQRVLSLPFSDNWFVFLLGQFNLQKFVSSVKSSDEKPARFSSWLKN 120

Query: 121 IGKHLQQKSLYALGFCSEFQLTPNDTLLFGLDGYDYADKPRGKAVLHHEFPHHDLKVEAV 180
            G+HLQQKSLYALG CSEFQLTP+DTLLFGLD YDY DKPRGKAV HH+FPHHDL VEAV
Sbjct: 121 FGRHLQQKSLYALGLCSEFQLTPDDTLLFGLDSYDYTDKPRGKAVFHHKFPHHDLTVEAV 180

Query: 181 YPGLFVDKTGNYWDVPFSMAIDLASVTTCDSSMGYHLSAQYTSGAPEQFESNQNQTVRVP 240
           YPGLFVDK GNYWDVP SMA+DLAS+TT DSS GYHLSA Y SG+P+QFES Q +  RVP
Sbjct: 181 YPGLFVDKIGNYWDVPLSMAVDLASLTTSDSSAGYHLSAHYNSGSPKQFESIQYENDRVP 240

Query: 241 PTLLPGLAFKSVFSYRMNTDIWRSEGRKLKLVQPYDIFLSSPHVXXXXXXXXXXXXXFGD 300
            TLLPGLAFKSVFSYR N DIWRSE  KLKL+QPYDIFLS+P +             FG+
Sbjct: 241 QTLLPGLAFKSVFSYRKNLDIWRSETPKLKLIQPYDIFLSNPLLSASGMIGAAATAYFGE 300

Query: 301 NSARAQVDDDRQGSPGFFIQAAGIKSSFVADMFASITLTAQHGNFQRLFLDLTRFQARLD 360
           NS RAQ+DDD Q S G F+QA GIKSSF+AD+F S++ TAQHGNFQRLFLDL+RFQARLD
Sbjct: 301 NSTRAQIDDDGQQSSGLFLQAPGIKSSFLADIFGSVSFTAQHGNFQRLFLDLSRFQARLD 360

Query: 361 FPRGSKFLSGATNLAQDLLNSQKPNMDDVQAICPNATLSLQQQIVGPVSFRVDSGVTIDV 420
           FP GSKFL GAT+LAQDLLNSQKPNM+ VQAICPNATLSLQQQIVGP+SFRVDSG+ ID+
Sbjct: 361 FPSGSKFLLGATSLAQDLLNSQKPNMEAVQAICPNATLSLQQQIVGPISFRVDSGIAIDL 420

Query: 421 KNPDWLVHAQEPVFAVEYALEVLGSAKAVAWYCPKRQEFMAELRFYET 468
           KN  W + AQ+P++AVE+AL+VLGSAKAVAW CPKRQEFM ELRFYET
Sbjct: 421 KNHKWPIQAQDPIYAVEWALQVLGSAKAVAWCCPKRQEFMVELRFYET 468


>Medtr8g009290.1 | pigment defective 320 protein, putative | HC |
           chr8:2111759-2106435 | 20130731
          Length = 465

 Score =  243 bits (620), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 164/482 (34%), Positives = 245/482 (50%), Gaps = 33/482 (6%)

Query: 1   MRKLRWVMDGGAFWDLDVSTPKTLDGLACPVPEDPLPLGLSRGTRLSRPKQL-HFMHTFM 59
           M KLR  +D  +FWDL++S+P+ LDG A  VP DP+PL  S  +RL R +QL H    F 
Sbjct: 1   MAKLRTAIDS-SFWDLNISSPQNLDGWAKFVPGDPIPLDASVSSRLYRHQQLPHITPHFP 59

Query: 60  HALL---LPSYAKPHG-LTLQRVLSLPFSENWIVYLLGQFNLQRFVSSVKSSKETPEGFS 115
             ++   +PS  K HG  +LQ +L       W +   GQF  ++ +  +K+       F+
Sbjct: 60  FGIIPSSVPSPKKEHGSFSLQSLLLDFTGPRWWLAATGQFRPRKMIVDIKNEICNAAEFN 119

Query: 116 -SWLKNIGKHLQQKSLYALGFCSEFQLTPNDTLLFGLDGYDYADKPRGKAVLHHEFPHHD 174
            S  K++ KH   KSL++ G  S+F L+P+ ++LFGL+G+   +K R K V   E   HD
Sbjct: 120 LSTAKSVAKHFIDKSLFSYGLNSQFALSPSTSVLFGLEGHGEKEKHRKKVVFFQELSDHD 179

Query: 175 LKVEAVYPGLFVDKTGNYWDVPFSMAIDLASVTTCDSSMGYHLSAQYTSGAPEQFESNQN 234
           L VEA +P LFVD  G YWDVP S+++DLAS+      + Y       +G+P+   +  +
Sbjct: 180 LTVEAAWPQLFVDHKGRYWDVPESISVDLASL-VARRGLRYRFGMHKNNGSPQATNATDS 238

Query: 235 QTVRVPPTLLPGLAFKSVFSYRMNTDIWRS--EGRKLKLVQPYDIFLSSPHVXXXXXXXX 292
            T   P +LLPGL  K+  +Y     +WR+     + K + P+D  L  PH         
Sbjct: 239 DT---PLSLLPGLCAKASVTYDKIKYLWRNTETEEEYKDLFPHDQGLMVPHEAVSGIIGS 295

Query: 293 XXXXXFGDNSARAQVDDDRQGSPGFFIQAAGIKSSFVADMFASITLTAQHGNFQRLFLDL 352
                  +        +D        +     +S F A++F S+  T Q G F + F DL
Sbjct: 296 SCASWIWNGKNLIDTGEDPA------VSKRRKRSRFNAEIFGSVCYTFQQGRFSKKFGDL 349

Query: 353 TRFQARLDFPRGSKFLSGATNLAQDLLNSQKPNMDDV---QAICPNATLSLQQQIVGPVS 409
           TR  ARLD       +S A+ LA+ +LN  K +  D+    +  P   L  QQQ+ GPV 
Sbjct: 350 TRVDARLD-------ISSASGLAKKILNGFKSSSADIIEQPSASPRLNLIFQQQVAGPVV 402

Query: 410 FRVDSGVTIDVKNPDWLVHAQEPVFAVEYALEV----LGSAKAVAWYCPKRQEFMAELRF 465
           FR DS ++ID  +    +  ++ + ++ + ++     + S K VAWY PKR E M ELR 
Sbjct: 403 FRADSRISIDSLSRKHGISIEDFICSLNFYMDPNTSDMESGKIVAWYSPKRNEGMVELRL 462

Query: 466 YE 467
           YE
Sbjct: 463 YE 464