Miyakogusa Predicted Gene

Lj6g3v1392570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1392570.1 tr|A9VBI3|A9VBI3_MONBE Predicted protein
OS=Monosiga brevicollis GN=29580 PE=4
SV=1,26.72,0.000000000000007,seg,NULL; Pectin lyase-like,Pectin lyase
fold/virulence factor; Beta_helix,NULL,gene.g66174.t1.1
         (358 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g035790.1 | polygalacturonase QRT3-like protein | HC | chr...   512   e-145
Medtr4g094732.1 | polygalacturonase QRT3-like protein | HC | chr...   488   e-138
Medtr2g035760.1 | polygalacturonase QRT3-like protein | HC | chr...   342   3e-94
Medtr6g015785.1 | polygalacturonase QRT3-like protein | HC | chr...   331   5e-91

>Medtr2g035790.1 | polygalacturonase QRT3-like protein | HC |
           chr2:15178610-15181077 | 20130731
          Length = 488

 Score =  512 bits (1318), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 258/327 (78%), Positives = 282/327 (86%), Gaps = 10/327 (3%)

Query: 5   VQGGTLRASDKFPPDRHLVELSASNSHNLQEPAASIHRHHHHGFNSKKLQQNIGIYYEDI 64
           V+GGTLRAS+ FP DR+LVEL AS+S  LQ    +        +N+K LQQ IGIYYEDI
Sbjct: 143 VKGGTLRASNTFPTDRYLVELCASSSKVLQNATTA--------YNNKLLQQTIGIYYEDI 194

Query: 65  TFRDIFFDSSYRGGGILIVDSARVRITNCFFLHFTTEGIQVQRGHETYISSTFLGQHSTV 124
           TFRDI FDSSYRGGGI IVDSAR+RI NCFFLHF TEGI+VQ GHET+ISS+FLGQHSTV
Sbjct: 195 TFRDILFDSSYRGGGIFIVDSARIRIDNCFFLHFNTEGIKVQSGHETFISSSFLGQHSTV 254

Query: 125 GGDKGEREFSGTAIDLASNDNAITDVSIFSAAIGIVLRGQANMITGVHCYNKATAFGGIG 184
           GGDKGER+FSGTAIDLASNDNAITDV+IFSAAIGIV+RGQAN+ITGVHCYNKAT FGGIG
Sbjct: 255 GGDKGERQFSGTAIDLASNDNAITDVAIFSAAIGIVVRGQANIITGVHCYNKATGFGGIG 314

Query: 185 ILVKLAGYSQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGGANIVLKSIKGKVSGLNIVD 244
           IL+KLAG SQTRIDNCYMDY  IVMEDPVQVHVT+GFFLG ANIVLKSIKGKV GLNIV+
Sbjct: 315 ILLKLAGNSQTRIDNCYMDYNSIVMEDPVQVHVTDGFFLGDANIVLKSIKGKVYGLNIVN 374

Query: 245 NMFSGKW-NQVPIVALDGQFSSIDQVVIDRNNVYGSMSLRSTVSKLTVAGNGSKWVADFS 303
           NMFSG   N VPIV LDG FS+IDQVVIDRNNV G M LRSTV KL+V GNG+KWV DFS
Sbjct: 375 NMFSGNPNNNVPIVKLDGGFSNIDQVVIDRNNVIG-MILRSTVGKLSVDGNGTKWVGDFS 433

Query: 304 NVLVFPNRISHFQYSFYSQGEPKFLAH 330
           NVLVFPNRISHFQYSF++   PKF+AH
Sbjct: 434 NVLVFPNRISHFQYSFHTLEGPKFVAH 460


>Medtr4g094732.1 | polygalacturonase QRT3-like protein | HC |
           chr4:38860963-38858816 | 20130731
          Length = 480

 Score =  488 bits (1256), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 243/328 (74%), Positives = 276/328 (84%), Gaps = 9/328 (2%)

Query: 5   VQGGTLRASDKFPPDRHLVELSASNSHNLQEPAASIHRHHHHGFN-SKKLQQNIGIYYED 63
           V+GGTLRASD FP DRHLVE+ +SNS  LQ       + +  G N S    QN GIYYED
Sbjct: 132 VKGGTLRASDTFPGDRHLVEMWSSNSKKLQT------KEYMQGGNFSGIYAQNNGIYYED 185

Query: 64  ITFRDIFFDSSYRGGGILIVDSARVRITNCFFLHFTTEGIQVQRGHETYISSTFLGQHST 123
           +TFRDI FDS YRGGG+ IVDSAR RI NCFFLHFTTEGI VQ+GHET+ISS FLGQHST
Sbjct: 186 VTFRDILFDSRYRGGGLFIVDSARTRINNCFFLHFTTEGILVQQGHETFISSCFLGQHST 245

Query: 124 VGGDKGEREFSGTAIDLASNDNAITDVSIFSAAIGIVLRGQANMITGVHCYNKATAFGGI 183
           VGGD GE+++SG  IDLASNDNAITDV+IFSAA GIVLRGQAN+++GVHCYNKA  FGGI
Sbjct: 246 VGGDHGEKDYSGVGIDLASNDNAITDVAIFSAATGIVLRGQANILSGVHCYNKAAGFGGI 305

Query: 184 GILVKLAGYSQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGGANIVLKSIKGKVSGLNIV 243
           GILVKLAG S TRIDNCYMDYTGIV EDPVQVHVTN  FLG ANI++K+ +G++ GLNIV
Sbjct: 306 GILVKLAGNSLTRIDNCYMDYTGIVTEDPVQVHVTNCLFLGDANILIKAAEGQILGLNIV 365

Query: 244 DNMFSGKWN-QVPIVALDGQFSSIDQVVIDRNNVYGSMSLRSTVSKLTVAGNGSKWVADF 302
           DNMF+G  N +VPIV+L+GQFS++DQVVIDRNNV G M LRSTV KLTV+GNG+KW ADF
Sbjct: 366 DNMFNGDPNKKVPIVSLEGQFSNVDQVVIDRNNVNG-MGLRSTVGKLTVSGNGTKWEADF 424

Query: 303 SNVLVFPNRISHFQYSFYSQGEPKFLAH 330
           S+VLVFPNRISH QYSFY+QGEPKF+AH
Sbjct: 425 SSVLVFPNRISHVQYSFYAQGEPKFVAH 452


>Medtr2g035760.1 | polygalacturonase QRT3-like protein | HC |
           chr2:15158916-15161418 | 20130731
          Length = 497

 Score =  342 bits (877), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 174/323 (53%), Positives = 225/323 (69%), Gaps = 21/323 (6%)

Query: 5   VQGGTLRASDKFPPDRHLVELSASNSHNLQEPAASIHRHHHHGFNSKKLQQNIGIYYEDI 64
           + GGT++AS+ FP D ++++LS S++ N              G NS     N    +E I
Sbjct: 156 IHGGTIKASNDFPNDGYIIDLSTSSNEN-------------DGKNSPSSSYN----FEYI 198

Query: 65  TFRDIFFDSSYRGGGILIVDSARVRITNCFFLHFTTEGIQVQRGHETYISSTFLGQHSTV 124
           T +D+  DS++RGGGI +++S R  I NC+  HFTT GI VQ GHETYI ++FLGQH T 
Sbjct: 199 TLKDLLLDSNFRGGGISVINSLRTNIDNCYITHFTTNGILVQSGHETYIRNSFLGQHITA 258

Query: 125 GGDKGEREFSGTAIDLASNDNAITDVSIFSAAIGIVLRGQANMITGVHCYNKATAFGGIG 184
           GGDK ER FSGT I++  NDNA+TDV IFSAAIGI++ GQAN  +GVHCYNKAT FGG G
Sbjct: 259 GGDKNERNFSGTGINIQGNDNAVTDVVIFSAAIGIMVTGQANTFSGVHCYNKATGFGGTG 318

Query: 185 ILVKLAGYSQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGGANIVLKSIKGKVSGLNIVD 244
           I +KL G +QTRI N YMDYT IV EDPVQ+H+++ FFLG ANIVLKS+KG ++G+ IVD
Sbjct: 319 IYLKLPGLTQTRIVNSYMDYTSIVAEDPVQLHISSSFFLGDANIVLKSMKGVLNGVTIVD 378

Query: 245 NMFSGKWNQVPIVALD---GQFSSIDQVVIDRNNVYGSMSLRSTVSKLTVAGNGSKWVAD 301
           NMFSG    V ++ LD   G F  IDQV +DRN   G M+L++TV+K ++ GNG+ W  D
Sbjct: 379 NMFSGSNQGVEVIHLDKSNGPFHQIDQVTVDRNVATG-MNLKATVAKRSLQGNGTSWNVD 437

Query: 302 FSNVLVFPNRISHFQYSFYSQGE 324
           F+N+L+FPN I + QYS  S G 
Sbjct: 438 FNNILLFPNLIKNVQYSLSSTGS 460


>Medtr6g015785.1 | polygalacturonase QRT3-like protein | HC |
           chr6:5462771-5458842 | 20130731
          Length = 494

 Score =  331 bits (849), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 172/324 (53%), Positives = 219/324 (67%), Gaps = 28/324 (8%)

Query: 4   QVQGGTLRASDKFPPDRHLVELSASNSHNLQEPAASIHRHHHHGFNSKKLQQNIGIYYED 63
            + GGT++AS+ FP +++L++LS                     F S     N    YE 
Sbjct: 159 MIHGGTIKASNNFPSNKNLIDLS--------------------NFGSTSPSYN----YEY 194

Query: 64  ITFRDIFFDSSYRGGGILIVDSARVRITNCFFLHFTTEGIQVQRGHETYISSTFLGQHST 123
           IT +D+F DS+++GGGI I +S R+ I NC+  HF T GI VQ GHETYI +TF+GQH T
Sbjct: 195 ITLKDLFLDSNFKGGGISITNSLRINIDNCYITHFITNGILVQSGHETYIRNTFIGQHIT 254

Query: 124 VGGDKGEREFSGTAIDLASNDNAITDVSIFSAAIGIVLRGQANMITGVHCYNKATAFGGI 183
            GGDK ER+FSG  I L  NDNAITDV IFSA IGI++ GQAN I+GVHCYNKA+ FGG 
Sbjct: 255 AGGDKNERKFSGIGISLQGNDNAITDVVIFSANIGIMITGQANTISGVHCYNKASGFGGT 314

Query: 184 GILVKLAGYSQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGGANIVLKSIKGKVSGLNIV 243
           GI +KL G +QTRI N YMDYT IV EDPVQ+H+++ FFLG A IVLKSIKG V+GLNIV
Sbjct: 315 GIYLKLPGLTQTRIVNSYMDYTNIVAEDPVQLHISSSFFLGDAKIVLKSIKGIVNGLNIV 374

Query: 244 DNMFSGKWNQVPIVALD---GQFSSIDQVVIDRNNVYGSMSLRSTVSKLTVAGNGSKWVA 300
           DNMFSG  +   IV LD     F  IDQV + RN V G M+L++T + +++ GNG+ W+A
Sbjct: 375 DNMFSGSNHGDEIVKLDTSISPFKQIDQVFVARNVVNG-MNLKATSAMISLHGNGTSWIA 433

Query: 301 DFSNVLVFPNRISHFQYSFYSQGE 324
           DF+ +L+FPN I + QYS  + G 
Sbjct: 434 DFNKILIFPNLIRNVQYSLSASGN 457