Miyakogusa Predicted Gene
- Lj6g3v1356520.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1356520.1 tr|G7IN26|G7IN26_MEDTR Pumilio-like protein
OS=Medicago truncatula GN=MTR_2g036900 PE=4 SV=1,79.72,0,PUF,Pumilio
RNA-binding repeat; PUMILIO 1, 2,NULL; RNA BINDING PROTEIN
PUMILIO-RELATED,NULL; Pumilio,CUFF.59391.1
(976 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g036900.2 | pumilio-family RNA-binding repeatprotein | HC ... 1515 0.0
Medtr2g036900.1 | pumilio-family RNA-binding repeatprotein | HC ... 1515 0.0
Medtr2g036900.3 | pumilio-family RNA-binding repeatprotein | HC ... 1403 0.0
Medtr2g097670.2 | pumilio Mpt5 protein, putative | HC | chr2:417... 505 e-143
Medtr2g097670.1 | pumilio Mpt5 protein, putative | HC | chr2:417... 505 e-143
Medtr4g064670.1 | pumilio Mpt5 protein, putative | HC | chr4:241... 499 e-141
Medtr4g064670.2 | pumilio Mpt5 protein, putative | HC | chr4:241... 498 e-140
Medtr5g080390.1 | pumilio-family RNA-binding repeatprotein | HC ... 490 e-138
Medtr1g094630.1 | pumilio-family RNA-binding repeatprotein | HC ... 474 e-133
Medtr2g097670.3 | pumilio Mpt5 protein, putative | HC | chr2:417... 349 8e-96
Medtr1g094630.3 | pumilio-family RNA-binding repeatprotein | HC ... 333 5e-91
Medtr5g063650.1 | pumilio-family RNA-binding repeatprotein | LC ... 180 6e-45
Medtr2g008770.1 | pumilio-family RNA-binding repeatprotein | LC ... 172 1e-42
Medtr1g094630.2 | pumilio-family RNA-binding repeatprotein | HC ... 168 2e-41
Medtr3g102650.1 | pumilio-family RNA-binding repeatprotein | LC ... 123 1e-27
Medtr1g106975.1 | pumilio-family RNA-binding repeatprotein | LC ... 121 4e-27
Medtr5g062070.1 | pumilio-family RNA-binding repeatprotein | LC ... 112 1e-24
Medtr2g006930.1 | pumilio-family RNA-binding repeatprotein | LC ... 111 3e-24
Medtr1g100230.1 | pumilio-like protein | LC | chr1:45172367-4517... 102 1e-21
Medtr2g006940.1 | pumilio-like protein | LC | chr2:736512-738484... 79 2e-14
>Medtr2g036900.2 | pumilio-family RNA-binding repeatprotein | HC |
chr2:16007791-15999134 | 20130731
Length = 984
Score = 1515 bits (3923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 748/986 (75%), Positives = 813/986 (82%), Gaps = 12/986 (1%)
Query: 1 MATESPIRISEAGGKWPSHKEAATFGQPSHNMVTEDLGILLKGHRFHGRGHDVAPNRSGS 60
MATESPIRISEAGGKWPSH EA+ +G P NM EDLG+LLKGHRF G G D AP+RSGS
Sbjct: 1 MATESPIRISEAGGKWPSHMEASAYGTPPRNMGAEDLGVLLKGHRFRGSGKDAAPSRSGS 60
Query: 61 APPSMEGSFLAIENLLHXXXXXXXXXXXXXXRAVQNCESEEQLRASPAYLAYYSSXXXXX 120
APPSMEGSFLAIENLL RAV+NCESEEQLRA PAYLAYY+S
Sbjct: 61 APPSMEGSFLAIENLL-PLQNTQDASLTGLSRAVKNCESEEQLRADPAYLAYYNSNVNLN 119
Query: 121 XXXXXXXTSWENRHLGHHIGSFRDNGRFSS-DHGSKSSL-------STHKEEPEDDSPKR 172
TSWENRH GH +GS +N SS DH SKSSL STHKEE EDDSP++
Sbjct: 120 PRLPPPLTSWENRHTGHRVGSSGNNWGLSSIDHRSKSSLHLPQATLSTHKEESEDDSPQQ 179
Query: 173 -PYESELVKTTGVWHRPGAASLTSQHKNAVDLIQEDFPRTMSPVYNKSPSASHGLVDKXX 231
+E+ELV T+GVW R AASL Q KN VDLIQEDFPRTMSPVYN S SASH L DK
Sbjct: 180 QAHENELVNTSGVWRRQDAASLAPQPKNMVDLIQEDFPRTMSPVYNMSLSASHRLGDKPI 239
Query: 232 XXXXXXXXXXXXXXXXXXXAQPTADEGDIRLSSSFDTHAPVAXXXXXXXXXXMGFSDLNV 291
A+ TA DIR+SSS D H PVA MGFS+L+
Sbjct: 240 ELEAGSRSSHDAHDTAVESAKSTAGADDIRVSSSVDVHTPVASSSTFEPTASMGFSNLDA 299
Query: 292 ATIESQLKALSVSNLPNPESLSYEEKWKTIYQNNLMQRQVFPQQNNPYEVPSANSQSVNS 351
AT+ SQL LSVSNLPN E+LSYEEK T YQNN+MQRQVF QQ+ PYEVPSANSQSVN
Sbjct: 300 ATVASQLNTLSVSNLPNSENLSYEEKLMTSYQNNMMQRQVFAQQSYPYEVPSANSQSVNP 359
Query: 352 AYVVREQFPQNSGKFPDVQPLLQSSGFTPPLYATAAAYMTSANPFYTNMQAPGIYTPQYV 411
AYV REQFP NS K PDVQPLLQSSGFTPPLYATAAAYM S NPFY NMQA G YTPQYV
Sbjct: 360 AYVGREQFPHNSSKLPDVQPLLQSSGFTPPLYATAAAYMASVNPFYNNMQASGPYTPQYV 419
Query: 412 GGYTLNPTAIPQYITAYPPHGAVP-LVDGASSSRYTPLTPGVSTGGSISHGAEMVHANKY 470
GGYTLNPTA+ YI+AYPPHGAVP +VDGA+SS Y PLTPGVSTGG+ISHGAEMVHANKY
Sbjct: 420 GGYTLNPTAVQPYISAYPPHGAVPFVVDGATSSSYAPLTPGVSTGGNISHGAEMVHANKY 479
Query: 471 LGQFGYPMQPSFGDPYYMQYHQQPLMEGYGISGHFDPLAPRASDASQTSPYDSQKRPSTG 530
LGQFG+P+QPSFGDP YMQY+QQP +EGYGISGHFDP APRAS Q +PYDSQKRP TG
Sbjct: 480 LGQFGFPVQPSFGDPIYMQYNQQPFVEGYGISGHFDPQAPRAS-VVQINPYDSQKRPGTG 538
Query: 531 AYLDDKRILDQRTGANINSRKGGSLTPSYFGHMPNMGFVMQYPNSPLPSPAFSGYPEGTL 590
AYLDDK++ +QRTGA++NSR+GG P+YFGH+PN GFVMQYP SPLPSP SGYP+G+
Sbjct: 539 AYLDDKKLHEQRTGASMNSRRGGLPVPNYFGHVPNTGFVMQYPGSPLPSPVLSGYPDGSP 598
Query: 591 GLPGGRNEMKLSPASGRNGGILSGWQGQRSFDSAHDPKIVNFLEELKSGKGRRFELSDII 650
GL GGRNE+K SPASGRNGG+++GW G RSFDS DPKIVNFLEELKSGKGRRFELSDII
Sbjct: 599 GLSGGRNEIKPSPASGRNGGMVTGWYGPRSFDSGQDPKIVNFLEELKSGKGRRFELSDII 658
Query: 651 GHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQKFFEYGS 710
GHIVEFS+DQHGSRFIQQKLE+CG E+KALVFKEVLP ASKLMTDVFGNYVIQKFFEYG+
Sbjct: 659 GHIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGN 718
Query: 711 PEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRELDGNVMRCVRDQNG 770
PEQR+ELA++LAGQILPLSLQMYGCRVIQKALEVI+H+QKAQLVRELDGN+MRCVRDQNG
Sbjct: 719 PEQRKELAEKLAGQILPLSLQMYGCRVIQKALEVIEHEQKAQLVRELDGNIMRCVRDQNG 778
Query: 771 NHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEI 830
NHVIQKCIESIPT KIGFILSAF GQVANLSMHPYGCRVIQR+LEHCTDEVQCQFIVDEI
Sbjct: 779 NHVIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDEVQCQFIVDEI 838
Query: 831 LESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYG 890
LESVC+LAQDQYGNYVTQHVLERG+PQERSQII KLSGH+VQLSQHKFASNVVEKCL YG
Sbjct: 839 LESVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLSQHKFASNVVEKCLEYG 898
Query: 891 DVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQA 950
D ERE LI EII DEQN+NLLTMMKDQFANYV+QKVID+CSENQRA LLSHIR HA A
Sbjct: 899 DASEREVLIVEIIAHDEQNDNLLTMMKDQFANYVIQKVIDICSENQRARLLSHIRAHANA 958
Query: 951 LKKYTYGKHIVARLEQQFEEDQSPSS 976
LKKYTYGKHIVAR+E QF E+Q+PSS
Sbjct: 959 LKKYTYGKHIVARMEHQFGENQAPSS 984
>Medtr2g036900.1 | pumilio-family RNA-binding repeatprotein | HC |
chr2:16007791-15999134 | 20130731
Length = 984
Score = 1515 bits (3923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 748/986 (75%), Positives = 813/986 (82%), Gaps = 12/986 (1%)
Query: 1 MATESPIRISEAGGKWPSHKEAATFGQPSHNMVTEDLGILLKGHRFHGRGHDVAPNRSGS 60
MATESPIRISEAGGKWPSH EA+ +G P NM EDLG+LLKGHRF G G D AP+RSGS
Sbjct: 1 MATESPIRISEAGGKWPSHMEASAYGTPPRNMGAEDLGVLLKGHRFRGSGKDAAPSRSGS 60
Query: 61 APPSMEGSFLAIENLLHXXXXXXXXXXXXXXRAVQNCESEEQLRASPAYLAYYSSXXXXX 120
APPSMEGSFLAIENLL RAV+NCESEEQLRA PAYLAYY+S
Sbjct: 61 APPSMEGSFLAIENLL-PLQNTQDASLTGLSRAVKNCESEEQLRADPAYLAYYNSNVNLN 119
Query: 121 XXXXXXXTSWENRHLGHHIGSFRDNGRFSS-DHGSKSSL-------STHKEEPEDDSPKR 172
TSWENRH GH +GS +N SS DH SKSSL STHKEE EDDSP++
Sbjct: 120 PRLPPPLTSWENRHTGHRVGSSGNNWGLSSIDHRSKSSLHLPQATLSTHKEESEDDSPQQ 179
Query: 173 -PYESELVKTTGVWHRPGAASLTSQHKNAVDLIQEDFPRTMSPVYNKSPSASHGLVDKXX 231
+E+ELV T+GVW R AASL Q KN VDLIQEDFPRTMSPVYN S SASH L DK
Sbjct: 180 QAHENELVNTSGVWRRQDAASLAPQPKNMVDLIQEDFPRTMSPVYNMSLSASHRLGDKPI 239
Query: 232 XXXXXXXXXXXXXXXXXXXAQPTADEGDIRLSSSFDTHAPVAXXXXXXXXXXMGFSDLNV 291
A+ TA DIR+SSS D H PVA MGFS+L+
Sbjct: 240 ELEAGSRSSHDAHDTAVESAKSTAGADDIRVSSSVDVHTPVASSSTFEPTASMGFSNLDA 299
Query: 292 ATIESQLKALSVSNLPNPESLSYEEKWKTIYQNNLMQRQVFPQQNNPYEVPSANSQSVNS 351
AT+ SQL LSVSNLPN E+LSYEEK T YQNN+MQRQVF QQ+ PYEVPSANSQSVN
Sbjct: 300 ATVASQLNTLSVSNLPNSENLSYEEKLMTSYQNNMMQRQVFAQQSYPYEVPSANSQSVNP 359
Query: 352 AYVVREQFPQNSGKFPDVQPLLQSSGFTPPLYATAAAYMTSANPFYTNMQAPGIYTPQYV 411
AYV REQFP NS K PDVQPLLQSSGFTPPLYATAAAYM S NPFY NMQA G YTPQYV
Sbjct: 360 AYVGREQFPHNSSKLPDVQPLLQSSGFTPPLYATAAAYMASVNPFYNNMQASGPYTPQYV 419
Query: 412 GGYTLNPTAIPQYITAYPPHGAVP-LVDGASSSRYTPLTPGVSTGGSISHGAEMVHANKY 470
GGYTLNPTA+ YI+AYPPHGAVP +VDGA+SS Y PLTPGVSTGG+ISHGAEMVHANKY
Sbjct: 420 GGYTLNPTAVQPYISAYPPHGAVPFVVDGATSSSYAPLTPGVSTGGNISHGAEMVHANKY 479
Query: 471 LGQFGYPMQPSFGDPYYMQYHQQPLMEGYGISGHFDPLAPRASDASQTSPYDSQKRPSTG 530
LGQFG+P+QPSFGDP YMQY+QQP +EGYGISGHFDP APRAS Q +PYDSQKRP TG
Sbjct: 480 LGQFGFPVQPSFGDPIYMQYNQQPFVEGYGISGHFDPQAPRAS-VVQINPYDSQKRPGTG 538
Query: 531 AYLDDKRILDQRTGANINSRKGGSLTPSYFGHMPNMGFVMQYPNSPLPSPAFSGYPEGTL 590
AYLDDK++ +QRTGA++NSR+GG P+YFGH+PN GFVMQYP SPLPSP SGYP+G+
Sbjct: 539 AYLDDKKLHEQRTGASMNSRRGGLPVPNYFGHVPNTGFVMQYPGSPLPSPVLSGYPDGSP 598
Query: 591 GLPGGRNEMKLSPASGRNGGILSGWQGQRSFDSAHDPKIVNFLEELKSGKGRRFELSDII 650
GL GGRNE+K SPASGRNGG+++GW G RSFDS DPKIVNFLEELKSGKGRRFELSDII
Sbjct: 599 GLSGGRNEIKPSPASGRNGGMVTGWYGPRSFDSGQDPKIVNFLEELKSGKGRRFELSDII 658
Query: 651 GHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQKFFEYGS 710
GHIVEFS+DQHGSRFIQQKLE+CG E+KALVFKEVLP ASKLMTDVFGNYVIQKFFEYG+
Sbjct: 659 GHIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGN 718
Query: 711 PEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRELDGNVMRCVRDQNG 770
PEQR+ELA++LAGQILPLSLQMYGCRVIQKALEVI+H+QKAQLVRELDGN+MRCVRDQNG
Sbjct: 719 PEQRKELAEKLAGQILPLSLQMYGCRVIQKALEVIEHEQKAQLVRELDGNIMRCVRDQNG 778
Query: 771 NHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEI 830
NHVIQKCIESIPT KIGFILSAF GQVANLSMHPYGCRVIQR+LEHCTDEVQCQFIVDEI
Sbjct: 779 NHVIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDEVQCQFIVDEI 838
Query: 831 LESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYG 890
LESVC+LAQDQYGNYVTQHVLERG+PQERSQII KLSGH+VQLSQHKFASNVVEKCL YG
Sbjct: 839 LESVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLSQHKFASNVVEKCLEYG 898
Query: 891 DVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQA 950
D ERE LI EII DEQN+NLLTMMKDQFANYV+QKVID+CSENQRA LLSHIR HA A
Sbjct: 899 DASEREVLIVEIIAHDEQNDNLLTMMKDQFANYVIQKVIDICSENQRARLLSHIRAHANA 958
Query: 951 LKKYTYGKHIVARLEQQFEEDQSPSS 976
LKKYTYGKHIVAR+E QF E+Q+PSS
Sbjct: 959 LKKYTYGKHIVARMEHQFGENQAPSS 984
>Medtr2g036900.3 | pumilio-family RNA-binding repeatprotein | HC |
chr2:16007791-16000131 | 20130731
Length = 926
Score = 1403 bits (3631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 695/924 (75%), Positives = 756/924 (81%), Gaps = 12/924 (1%)
Query: 1 MATESPIRISEAGGKWPSHKEAATFGQPSHNMVTEDLGILLKGHRFHGRGHDVAPNRSGS 60
MATESPIRISEAGGKWPSH EA+ +G P NM EDLG+LLKGHRF G G D AP+RSGS
Sbjct: 1 MATESPIRISEAGGKWPSHMEASAYGTPPRNMGAEDLGVLLKGHRFRGSGKDAAPSRSGS 60
Query: 61 APPSMEGSFLAIENLLHXXXXXXXXXXXXXXRAVQNCESEEQLRASPAYLAYYSSXXXXX 120
APPSMEGSFLAIENLL RAV+NCESEEQLRA PAYLAYY+S
Sbjct: 61 APPSMEGSFLAIENLL-PLQNTQDASLTGLSRAVKNCESEEQLRADPAYLAYYNSNVNLN 119
Query: 121 XXXXXXXTSWENRHLGHHIGSFRDNGRFSS-DHGSKSSL-------STHKEEPEDDSPKR 172
TSWENRH GH +GS +N SS DH SKSSL STHKEE EDDSP++
Sbjct: 120 PRLPPPLTSWENRHTGHRVGSSGNNWGLSSIDHRSKSSLHLPQATLSTHKEESEDDSPQQ 179
Query: 173 -PYESELVKTTGVWHRPGAASLTSQHKNAVDLIQEDFPRTMSPVYNKSPSASHGLVDKXX 231
+E+ELV T+GVW R AASL Q KN VDLIQEDFPRTMSPVYN S SASH L DK
Sbjct: 180 QAHENELVNTSGVWRRQDAASLAPQPKNMVDLIQEDFPRTMSPVYNMSLSASHRLGDKPI 239
Query: 232 XXXXXXXXXXXXXXXXXXXAQPTADEGDIRLSSSFDTHAPVAXXXXXXXXXXMGFSDLNV 291
A+ TA DIR+SSS D H PVA MGFS+L+
Sbjct: 240 ELEAGSRSSHDAHDTAVESAKSTAGADDIRVSSSVDVHTPVASSSTFEPTASMGFSNLDA 299
Query: 292 ATIESQLKALSVSNLPNPESLSYEEKWKTIYQNNLMQRQVFPQQNNPYEVPSANSQSVNS 351
AT+ SQL LSVSNLPN E+LSYEEK T YQNN+MQRQVF QQ+ PYEVPSANSQSVN
Sbjct: 300 ATVASQLNTLSVSNLPNSENLSYEEKLMTSYQNNMMQRQVFAQQSYPYEVPSANSQSVNP 359
Query: 352 AYVVREQFPQNSGKFPDVQPLLQSSGFTPPLYATAAAYMTSANPFYTNMQAPGIYTPQYV 411
AYV REQFP NS K PDVQPLLQSSGFTPPLYATAAAYM S NPFY NMQA G YTPQYV
Sbjct: 360 AYVGREQFPHNSSKLPDVQPLLQSSGFTPPLYATAAAYMASVNPFYNNMQASGPYTPQYV 419
Query: 412 GGYTLNPTAIPQYITAYPPHGAVP-LVDGASSSRYTPLTPGVSTGGSISHGAEMVHANKY 470
GGYTLNPTA+ YI+AYPPHGAVP +VDGA+SS Y PLTPGVSTGG+ISHGAEMVHANKY
Sbjct: 420 GGYTLNPTAVQPYISAYPPHGAVPFVVDGATSSSYAPLTPGVSTGGNISHGAEMVHANKY 479
Query: 471 LGQFGYPMQPSFGDPYYMQYHQQPLMEGYGISGHFDPLAPRASDASQTSPYDSQKRPSTG 530
LGQFG+P+QPSFGDP YMQY+QQP +EGYGISGHFDP APRAS Q +PYDSQKRP TG
Sbjct: 480 LGQFGFPVQPSFGDPIYMQYNQQPFVEGYGISGHFDPQAPRAS-VVQINPYDSQKRPGTG 538
Query: 531 AYLDDKRILDQRTGANINSRKGGSLTPSYFGHMPNMGFVMQYPNSPLPSPAFSGYPEGTL 590
AYLDDK++ +QRTGA++NSR+GG P+YFGH+PN GFVMQYP SPLPSP SGYP+G+
Sbjct: 539 AYLDDKKLHEQRTGASMNSRRGGLPVPNYFGHVPNTGFVMQYPGSPLPSPVLSGYPDGSP 598
Query: 591 GLPGGRNEMKLSPASGRNGGILSGWQGQRSFDSAHDPKIVNFLEELKSGKGRRFELSDII 650
GL GGRNE+K SPASGRNGG+++GW G RSFDS DPKIVNFLEELKSGKGRRFELSDII
Sbjct: 599 GLSGGRNEIKPSPASGRNGGMVTGWYGPRSFDSGQDPKIVNFLEELKSGKGRRFELSDII 658
Query: 651 GHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQKFFEYGS 710
GHIVEFS+DQHGSRFIQQKLE+CG E+KALVFKEVLP ASKLMTDVFGNYVIQKFFEYG+
Sbjct: 659 GHIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGN 718
Query: 711 PEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRELDGNVMRCVRDQNG 770
PEQR+ELA++LAGQILPLSLQMYGCRVIQKALEVI+H+QKAQLVRELDGN+MRCVRDQNG
Sbjct: 719 PEQRKELAEKLAGQILPLSLQMYGCRVIQKALEVIEHEQKAQLVRELDGNIMRCVRDQNG 778
Query: 771 NHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEI 830
NHVIQKCIESIPT KIGFILSAF GQVANLSMHPYGCRVIQR+LEHCTDEVQCQFIVDEI
Sbjct: 779 NHVIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDEVQCQFIVDEI 838
Query: 831 LESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYG 890
LESVC+LAQDQYGNYVTQHVLERG+PQERSQII KLSGH+VQLSQHKFASNVVEKCL YG
Sbjct: 839 LESVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLSQHKFASNVVEKCLEYG 898
Query: 891 DVPERESLIAEIIGQDEQNNNLLT 914
D ERE LI EII DEQN+NLL+
Sbjct: 899 DASEREVLIVEIIAHDEQNDNLLS 922
Score = 114 bits (286), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 131/252 (51%), Gaps = 9/252 (3%)
Query: 713 QRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRELDGNVMRCVRDQNGNH 772
+R EL+D + G I+ S +G R IQ+ LE ++KA + +E+ + + + D GN+
Sbjct: 650 RRFELSD-IIGHIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNY 708
Query: 773 VIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEILE 832
VIQK E ++ + GQ+ LS+ YGCRVIQ+ LE E + Q +V E+
Sbjct: 709 VIQKFFEYGNPEQRKELAEKLAGQILPLSLQMYGCRVIQKALEVIEHEQKAQ-LVRELDG 767
Query: 833 SVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVY-GD 891
++ +DQ GN+V Q +E + I+ G + LS H + V+++ L + D
Sbjct: 768 NIMRCVRDQNGNHVIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTD 827
Query: 892 VPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQAL 951
+ + ++ EI+ ++ ++ +DQ+ NYV Q V++ +R+ ++S + H L
Sbjct: 828 EVQCQFIVDEIL------ESVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQL 881
Query: 952 KKYTYGKHIVAR 963
++ + ++V +
Sbjct: 882 SQHKFASNVVEK 893
Score = 97.1 bits (240), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 788 FILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEILESVCALAQDQYGNYVT 847
F LS G + S +G R IQ+ LE C E + + E+L L D +GNYV
Sbjct: 652 FELSDIIGHIVEFSSDQHGSRFIQQKLESCGAEEKA-LVFKEVLPHASKLMTDVFGNYVI 710
Query: 848 QHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDE 907
Q E G P++R ++ KL+G I+ LS + V++K L + ++ L+ E+ G
Sbjct: 711 QKFFEYGNPEQRKELAEKLAGQILPLSLQMYGCRVIQKALEVIEHEQKAQLVRELDG--- 767
Query: 908 QNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQALKKYTYGKHIVARL 964
N++ ++DQ N+V+QK I+ N+ +LS R L + YG ++ R+
Sbjct: 768 ---NIMRCVRDQNGNHVIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRI 821
>Medtr2g097670.2 | pumilio Mpt5 protein, putative | HC |
chr2:41717566-41723738 | 20130731
Length = 1047
Score = 505 bits (1300), Expect = e-143, Method: Compositional matrix adjust.
Identities = 278/567 (49%), Positives = 365/567 (64%), Gaps = 23/567 (4%)
Query: 412 GGYTLNPTAIPQYITAYPPHGAVPLVDGASSSRYTPLTPGVST---GGSISHGAEM---V 465
GGY NP A+ ++ G +P + ++ ++PG+ + GG + G V
Sbjct: 475 GGYAGNP-AVASFMANQLGTGNMPPLFENVAAASAMVSPGMDSRILGGGLPSGVASPSDV 533
Query: 466 HANKYLGQ--FGYPMQPSFGDPYYMQYHQQPLMEGYGISGHFDPLAPRASDASQTSPYDS 523
H +G G +Q + DP Y+QY + P ++ DP R +
Sbjct: 534 HVLSRMGNQIAGGALQSPYVDPMYLQYMRTPEYAAAQLAALNDPSVDRNYLGNSYMNLLE 593
Query: 524 QKRPSTGAYLDDKRILDQRTGANINSRKGGSLTPSYFGHMPNMGFVMQYPNSPLPSPAFS 583
++ G+ L ++ + + + GGS Y+G+ P G + YP SP+ + + S
Sbjct: 594 LQKAYLGSLLSPQK---SQYNVPLGGKSGGSNHHGYYGN-PTYGVGLSYPGSPMAN-SLS 648
Query: 584 GYPEGTLGLPGGRNEMKLSPASG-RN-GGILSGWQGQRSFDSAH-DPKIVN-FLEELKSG 639
P G+ G P N++ + ASG RN G+++ W D+ + D + LEE KS
Sbjct: 649 TSPVGS-GSPIRHNDLNMHFASGMRNVAGVMAPWH----LDAVNVDENFASSLLEEFKSN 703
Query: 640 KGRRFELSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGN 699
K + FELS+I GH+VEFSADQ+GSRFIQQKLET E+K +V++E+ P A LMTDVFGN
Sbjct: 704 KTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHALALMTDVFGN 763
Query: 700 YVIQKFFEYGSPEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRELDG 759
YV+QKFFE+G QRRELA++L G +L LSLQMYGCRVIQKA+EV+D DQK ++V+ELDG
Sbjct: 764 YVVQKFFEHGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDG 823
Query: 760 NVMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTD 819
N+MRCVRDQNGNHVIQKCIE +P I FI+S F QV LS HPYGCRVIQRVLEHC +
Sbjct: 824 NIMRCVRDQNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVIQRVLEHCEN 883
Query: 820 EVQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFA 879
Q ++DEIL +V LAQDQYGNYV QHVLE GKP ERS II +L+G+IVQ+SQ KFA
Sbjct: 884 PDTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGNIVQMSQQKFA 943
Query: 880 SNVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRAT 939
SNVVEKCL +G ER L+ E++G ++N L MMKDQFANYVVQKV++ C + QR
Sbjct: 944 SNVVEKCLTFGGPSERLLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQREL 1003
Query: 940 LLSHIRVHAQALKKYTYGKHIVARLEQ 966
+LS I+VH ALKKYTYGKHIVAR+E+
Sbjct: 1004 ILSRIKVHLNALKKYTYGKHIVARVEK 1030
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
Query: 788 FILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEILESVCALAQDQYGNYVT 847
F LS G V S YG R IQ+ LE T E + + EI AL D +GNYV
Sbjct: 708 FELSEISGHVVEFSADQYGSRFIQQKLETATTE-EKNMVYQEITPHALALMTDVFGNYVV 766
Query: 848 QHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDE 907
Q E G +R ++ KL GH++ LS + V++K + D+ ++ ++ E+ G
Sbjct: 767 QKFFEHGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDG--- 823
Query: 908 QNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQALKKYTYGKHIVARLEQQ 967
N++ ++DQ N+V+QK I+ E+ ++S L + YG ++ R+ +
Sbjct: 824 ---NIMRCVRDQNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVIQRVLEH 880
Query: 968 FE 969
E
Sbjct: 881 CE 882
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 74/157 (47%), Gaps = 7/157 (4%)
Query: 815 EHCTDEVQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLS 874
E +++ +C F + EI V + DQYG+ Q LE +E++ + +++ H + L
Sbjct: 699 EFKSNKTKC-FELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHALALM 757
Query: 875 QHKFASNVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSE 934
F + VV+K +G +R L ++ G ++LT+ + V+QK I++
Sbjct: 758 TDVFGNYVVQKFFEHGLASQRRELANKLYG------HVLTLSLQMYGCRVIQKAIEVVDL 811
Query: 935 NQRATLLSHIRVHAQALKKYTYGKHIVARLEQQFEED 971
+Q+ ++ + + + G H++ + + ED
Sbjct: 812 DQKIKMVQELDGNIMRCVRDQNGNHVIQKCIECVPED 848
>Medtr2g097670.1 | pumilio Mpt5 protein, putative | HC |
chr2:41717566-41723738 | 20130731
Length = 1047
Score = 505 bits (1300), Expect = e-143, Method: Compositional matrix adjust.
Identities = 278/567 (49%), Positives = 365/567 (64%), Gaps = 23/567 (4%)
Query: 412 GGYTLNPTAIPQYITAYPPHGAVPLVDGASSSRYTPLTPGVST---GGSISHGAEM---V 465
GGY NP A+ ++ G +P + ++ ++PG+ + GG + G V
Sbjct: 475 GGYAGNP-AVASFMANQLGTGNMPPLFENVAAASAMVSPGMDSRILGGGLPSGVASPSDV 533
Query: 466 HANKYLGQ--FGYPMQPSFGDPYYMQYHQQPLMEGYGISGHFDPLAPRASDASQTSPYDS 523
H +G G +Q + DP Y+QY + P ++ DP R +
Sbjct: 534 HVLSRMGNQIAGGALQSPYVDPMYLQYMRTPEYAAAQLAALNDPSVDRNYLGNSYMNLLE 593
Query: 524 QKRPSTGAYLDDKRILDQRTGANINSRKGGSLTPSYFGHMPNMGFVMQYPNSPLPSPAFS 583
++ G+ L ++ + + + GGS Y+G+ P G + YP SP+ + + S
Sbjct: 594 LQKAYLGSLLSPQK---SQYNVPLGGKSGGSNHHGYYGN-PTYGVGLSYPGSPMAN-SLS 648
Query: 584 GYPEGTLGLPGGRNEMKLSPASG-RN-GGILSGWQGQRSFDSAH-DPKIVN-FLEELKSG 639
P G+ G P N++ + ASG RN G+++ W D+ + D + LEE KS
Sbjct: 649 TSPVGS-GSPIRHNDLNMHFASGMRNVAGVMAPWH----LDAVNVDENFASSLLEEFKSN 703
Query: 640 KGRRFELSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGN 699
K + FELS+I GH+VEFSADQ+GSRFIQQKLET E+K +V++E+ P A LMTDVFGN
Sbjct: 704 KTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHALALMTDVFGN 763
Query: 700 YVIQKFFEYGSPEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRELDG 759
YV+QKFFE+G QRRELA++L G +L LSLQMYGCRVIQKA+EV+D DQK ++V+ELDG
Sbjct: 764 YVVQKFFEHGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDG 823
Query: 760 NVMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTD 819
N+MRCVRDQNGNHVIQKCIE +P I FI+S F QV LS HPYGCRVIQRVLEHC +
Sbjct: 824 NIMRCVRDQNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVIQRVLEHCEN 883
Query: 820 EVQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFA 879
Q ++DEIL +V LAQDQYGNYV QHVLE GKP ERS II +L+G+IVQ+SQ KFA
Sbjct: 884 PDTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGNIVQMSQQKFA 943
Query: 880 SNVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRAT 939
SNVVEKCL +G ER L+ E++G ++N L MMKDQFANYVVQKV++ C + QR
Sbjct: 944 SNVVEKCLTFGGPSERLLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQREL 1003
Query: 940 LLSHIRVHAQALKKYTYGKHIVARLEQ 966
+LS I+VH ALKKYTYGKHIVAR+E+
Sbjct: 1004 ILSRIKVHLNALKKYTYGKHIVARVEK 1030
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
Query: 788 FILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEILESVCALAQDQYGNYVT 847
F LS G V S YG R IQ+ LE T E + + EI AL D +GNYV
Sbjct: 708 FELSEISGHVVEFSADQYGSRFIQQKLETATTE-EKNMVYQEITPHALALMTDVFGNYVV 766
Query: 848 QHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDE 907
Q E G +R ++ KL GH++ LS + V++K + D+ ++ ++ E+ G
Sbjct: 767 QKFFEHGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDG--- 823
Query: 908 QNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQALKKYTYGKHIVARLEQQ 967
N++ ++DQ N+V+QK I+ E+ ++S L + YG ++ R+ +
Sbjct: 824 ---NIMRCVRDQNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVIQRVLEH 880
Query: 968 FE 969
E
Sbjct: 881 CE 882
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 74/157 (47%), Gaps = 7/157 (4%)
Query: 815 EHCTDEVQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLS 874
E +++ +C F + EI V + DQYG+ Q LE +E++ + +++ H + L
Sbjct: 699 EFKSNKTKC-FELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHALALM 757
Query: 875 QHKFASNVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSE 934
F + VV+K +G +R L ++ G ++LT+ + V+QK I++
Sbjct: 758 TDVFGNYVVQKFFEHGLASQRRELANKLYG------HVLTLSLQMYGCRVIQKAIEVVDL 811
Query: 935 NQRATLLSHIRVHAQALKKYTYGKHIVARLEQQFEED 971
+Q+ ++ + + + G H++ + + ED
Sbjct: 812 DQKIKMVQELDGNIMRCVRDQNGNHVIQKCIECVPED 848
>Medtr4g064670.1 | pumilio Mpt5 protein, putative | HC |
chr4:24134583-24140955 | 20130731
Length = 1025
Score = 499 bits (1284), Expect = e-141, Method: Compositional matrix adjust.
Identities = 264/496 (53%), Positives = 336/496 (67%), Gaps = 15/496 (3%)
Query: 475 GYPMQPSFGDPYYMQYHQQPLMEGYGISGHFDPLAPRASDASQTSPYDSQKRPSTGAYLD 534
G +Q F DP Y+QY + ++ DP R + ++ G+ L
Sbjct: 524 GGALQAPFVDPMYLQYMRTSEYAAAQLAALNDPSVDRNYLGNSYMNLLELQKAYLGSVLS 583
Query: 535 DKRILDQRTGANINSRKGGSLTPSYFGHMPNMGFVMQYPNSPLPSPAFSGYPEGTLGLPG 594
++ + A + + G S Y+G+ P G + YP SP+ A SG P G+ G P
Sbjct: 584 PQK---SQYNAQLGGKSGNSNHHGYYGN-PAYGVGLSYPGSPM---ANSGSPVGS-GSPI 635
Query: 595 GRNEMK-LSPASG-RNGGILSGWQGQRSFDSAH--DPKIVNFLEELKSGKGRRFELSDII 650
N++ + ASG RN L+G G DS + + + LEE KS K + FELS+I
Sbjct: 636 RHNDLNNMRFASGMRN---LAGVMGPWHVDSGNMDESFASSLLEEFKSNKAKCFELSEIA 692
Query: 651 GHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQKFFEYGS 710
GH+VEFSADQ+GSRFIQQKLET E+K +V++E++P A LMTDVFGNYV+QKFFE+G
Sbjct: 693 GHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKFFEHGL 752
Query: 711 PEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRELDGNVMRCVRDQNG 770
QRRELA++L G +L LSLQMYGCRVIQKA+EV+D DQK ++V+ELDGN+MRCVRDQNG
Sbjct: 753 APQRRELANKLIGHVLTLSLQMYGCRVIQKAIEVVDLDQKIEMVKELDGNIMRCVRDQNG 812
Query: 771 NHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEI 830
NHVIQKCIE +P + I FI+S F QV LS HPYGCRVIQRVLEHC Q ++DEI
Sbjct: 813 NHVIQKCIECVPEEAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCESPATQQKVMDEI 872
Query: 831 LESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYG 890
L +V LAQDQYGNYV QHVLE GKP ERS II +L+G IVQ+SQ KFASNVVEKCL +
Sbjct: 873 LGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGKIVQMSQQKFASNVVEKCLTFS 932
Query: 891 DVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQA 950
ER+ L++E++G ++N L MMKDQFANYVVQKV++ C ++QR +LS I+VH A
Sbjct: 933 GPAERQILVSEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNA 992
Query: 951 LKKYTYGKHIVARLEQ 966
LKKYTYGKHIVAR+E+
Sbjct: 993 LKKYTYGKHIVARVEK 1008
Score = 93.6 bits (231), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 10/189 (5%)
Query: 788 FILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEILESVCALAQDQYGNYVT 847
F LS G V S YG R IQ+ LE T E + + EI+ AL D +GNYV
Sbjct: 686 FELSEIAGHVVEFSADQYGSRFIQQKLETATTE-EKNMVYQEIMPHALALMTDVFGNYVV 744
Query: 848 QHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDE 907
Q E G +R ++ KL GH++ LS + V++K + D+ ++ ++ E+ G
Sbjct: 745 QKFFEHGLAPQRRELANKLIGHVLTLSLQMYGCRVIQKAIEVVDLDQKIEMVKELDG--- 801
Query: 908 QNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQALKKYTYGKHIVARLEQQ 967
N++ ++DQ N+V+QK I+ E ++S L + YG ++ R+
Sbjct: 802 ---NIMRCVRDQNGNHVIQKCIECVPEEAIDFIVSTFFDQVVTLSTHPYGCRVIQRV--- 855
Query: 968 FEEDQSPSS 976
E +SP++
Sbjct: 856 LEHCESPAT 864
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 81/200 (40%), Gaps = 18/200 (9%)
Query: 33 VTEDLGILLKGHRFH---GRGHDVAPNRSGSAPPSMEGSFLAIENLLHXXXXXXXXXXXX 89
+ +++G+LL+ R R ++ RSGSAPP++EGS A+ L
Sbjct: 22 LEKEIGMLLREQRRQEGDDRERELNIFRSGSAPPTVEGSLNAVGGLFGAGGVAGGFSDFP 81
Query: 90 XXRAVQNCESEEQLRASPAYLAYYSSXXXXXXXXXXXXTSWENRHLGHH-------IGSF 142
+ V SEE+LR+ PAYL YY S S E+ +G
Sbjct: 82 GNKDVNGVVSEEELRSDPAYLQYYYSNVNLNPRLPPPLLSKEDWRFQQRLKGGASAVGGI 141
Query: 143 --RDNGRFSSDHGSKSSLSTHKEEPEDDSPKRPYESELVKTTGVWHRPG-----AASLTS 195
R G + D G +S ST + E+E + + W G + L S
Sbjct: 142 GDRRKGNMTDDSGGRSMFSTPPGFNFRKQERSEVENEKTRGSAEWGGDGLIGLPSLGLRS 201
Query: 196 QHKNAVDLIQEDFPRTMSPV 215
+ K+ ++ Q+D R +PV
Sbjct: 202 KQKSLAEIFQDDMERN-TPV 220
>Medtr4g064670.2 | pumilio Mpt5 protein, putative | HC |
chr4:24134583-24140955 | 20130731
Length = 954
Score = 498 bits (1283), Expect = e-140, Method: Compositional matrix adjust.
Identities = 264/496 (53%), Positives = 336/496 (67%), Gaps = 15/496 (3%)
Query: 475 GYPMQPSFGDPYYMQYHQQPLMEGYGISGHFDPLAPRASDASQTSPYDSQKRPSTGAYLD 534
G +Q F DP Y+QY + ++ DP R + ++ G+ L
Sbjct: 453 GGALQAPFVDPMYLQYMRTSEYAAAQLAALNDPSVDRNYLGNSYMNLLELQKAYLGSVLS 512
Query: 535 DKRILDQRTGANINSRKGGSLTPSYFGHMPNMGFVMQYPNSPLPSPAFSGYPEGTLGLPG 594
++ + A + + G S Y+G+ P G + YP SP+ A SG P G+ G P
Sbjct: 513 PQK---SQYNAQLGGKSGNSNHHGYYGN-PAYGVGLSYPGSPM---ANSGSPVGS-GSPI 564
Query: 595 GRNEMK-LSPASG-RNGGILSGWQGQRSFDSAH--DPKIVNFLEELKSGKGRRFELSDII 650
N++ + ASG RN L+G G DS + + + LEE KS K + FELS+I
Sbjct: 565 RHNDLNNMRFASGMRN---LAGVMGPWHVDSGNMDESFASSLLEEFKSNKAKCFELSEIA 621
Query: 651 GHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQKFFEYGS 710
GH+VEFSADQ+GSRFIQQKLET E+K +V++E++P A LMTDVFGNYV+QKFFE+G
Sbjct: 622 GHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKFFEHGL 681
Query: 711 PEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRELDGNVMRCVRDQNG 770
QRRELA++L G +L LSLQMYGCRVIQKA+EV+D DQK ++V+ELDGN+MRCVRDQNG
Sbjct: 682 APQRRELANKLIGHVLTLSLQMYGCRVIQKAIEVVDLDQKIEMVKELDGNIMRCVRDQNG 741
Query: 771 NHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEI 830
NHVIQKCIE +P + I FI+S F QV LS HPYGCRVIQRVLEHC Q ++DEI
Sbjct: 742 NHVIQKCIECVPEEAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCESPATQQKVMDEI 801
Query: 831 LESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYG 890
L +V LAQDQYGNYV QHVLE GKP ERS II +L+G IVQ+SQ KFASNVVEKCL +
Sbjct: 802 LGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGKIVQMSQQKFASNVVEKCLTFS 861
Query: 891 DVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQA 950
ER+ L++E++G ++N L MMKDQFANYVVQKV++ C ++QR +LS I+VH A
Sbjct: 862 GPAERQILVSEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNA 921
Query: 951 LKKYTYGKHIVARLEQ 966
LKKYTYGKHIVAR+E+
Sbjct: 922 LKKYTYGKHIVARVEK 937
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 10/189 (5%)
Query: 788 FILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEILESVCALAQDQYGNYVT 847
F LS G V S YG R IQ+ LE T E + + EI+ AL D +GNYV
Sbjct: 615 FELSEIAGHVVEFSADQYGSRFIQQKLETATTE-EKNMVYQEIMPHALALMTDVFGNYVV 673
Query: 848 QHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDE 907
Q E G +R ++ KL GH++ LS + V++K + D+ ++ ++ E+ G
Sbjct: 674 QKFFEHGLAPQRRELANKLIGHVLTLSLQMYGCRVIQKAIEVVDLDQKIEMVKELDG--- 730
Query: 908 QNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQALKKYTYGKHIVARLEQQ 967
N++ ++DQ N+V+QK I+ E ++S L + YG ++ R+
Sbjct: 731 ---NIMRCVRDQNGNHVIQKCIECVPEEAIDFIVSTFFDQVVTLSTHPYGCRVIQRV--- 784
Query: 968 FEEDQSPSS 976
E +SP++
Sbjct: 785 LEHCESPAT 793
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 81/200 (40%), Gaps = 18/200 (9%)
Query: 33 VTEDLGILLKGHRFH---GRGHDVAPNRSGSAPPSMEGSFLAIENLLHXXXXXXXXXXXX 89
+ +++G+LL+ R R ++ RSGSAPP++EGS A+ L
Sbjct: 22 LEKEIGMLLREQRRQEGDDRERELNIFRSGSAPPTVEGSLNAVGGLFGAGGVAGGFSDFP 81
Query: 90 XXRAVQNCESEEQLRASPAYLAYYSSXXXXXXXXXXXXTSWENRHLGHH-------IGSF 142
+ V SEE+LR+ PAYL YY S S E+ +G
Sbjct: 82 GNKDVNGVVSEEELRSDPAYLQYYYSNVNLNPRLPPPLLSKEDWRFQQRLKGGASAVGGI 141
Query: 143 --RDNGRFSSDHGSKSSLSTHKEEPEDDSPKRPYESELVKTTGVWHRPG-----AASLTS 195
R G + D G +S ST + E+E + + W G + L S
Sbjct: 142 GDRRKGNMTDDSGGRSMFSTPPGFNFRKQERSEVENEKTRGSAEWGGDGLIGLPSLGLRS 201
Query: 196 QHKNAVDLIQEDFPRTMSPV 215
+ K+ ++ Q+D R +PV
Sbjct: 202 KQKSLAEIFQDDMERN-TPV 220
>Medtr5g080390.1 | pumilio-family RNA-binding repeatprotein | HC |
chr5:34410395-34418672 | 20130731
Length = 1012
Score = 490 bits (1262), Expect = e-138, Method: Compositional matrix adjust.
Identities = 242/418 (57%), Positives = 304/418 (72%), Gaps = 4/418 (0%)
Query: 551 KGGSLTPSYFGHMPNMGFVMQYPNSPLPSPAFSGYPEGTLGLPGGRNEMKLSPASG-RN- 608
K S+ + +G+ P+ G M YP SPL F G G P ++E + A+G RN
Sbjct: 575 KSASMNHNSYGN-PSYGHGMSYPGSPLAGSPFPSSMYGP-GSPMSQSERNMRLAAGMRNV 632
Query: 609 GGILSGWQGQRSFDSAHDPKIVNFLEELKSGKGRRFELSDIIGHIVEFSADQHGSRFIQQ 668
G+ +G + S + + L+E KS K + FELS+I GH+VEFSADQ+GSRFIQQ
Sbjct: 633 AGVFTGAWHSDAVSSLDENFPSSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQ 692
Query: 669 KLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQKFFEYGSPEQRRELADQLAGQILPL 728
KLET +E+K +VF E++P+A LMTDVFGNYV+QKFFE+G+ EQ RELADQL G +L L
Sbjct: 693 KLETASMEEKTMVFNEIMPKALTLMTDVFGNYVVQKFFEHGTAEQIRELADQLTGHVLTL 752
Query: 729 SLQMYGCRVIQKALEVIDHDQKAQLVRELDGNVMRCVRDQNGNHVIQKCIESIPTKKIGF 788
SLQMYGCRVIQKA+EV++ DQK ++V ELDG++MRCVRDQNGNHVIQKCIE +P +I F
Sbjct: 753 SLQMYGCRVIQKAIEVVNLDQKTKMVTELDGHIMRCVRDQNGNHVIQKCIECVPEDEIKF 812
Query: 789 ILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEILESVCALAQDQYGNYVTQ 848
I+S F+ QV LS HPYGCRVIQRVLE+C D Q ++DEIL+ V LAQDQYGNYV Q
Sbjct: 813 IVSTFYDQVVTLSTHPYGCRVIQRVLEYCHDPKTQQIMMDEILQCVSMLAQDQYGNYVVQ 872
Query: 849 HVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDEQ 908
HVLE GKP ER+ II + +G IVQ+SQ KFASNV+EKCL +G ER+ L+ E+IG +
Sbjct: 873 HVLEHGKPHERTAIIKEFTGQIVQMSQQKFASNVIEKCLSFGTPTERQVLVNEMIGSTDD 932
Query: 909 NNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQALKKYTYGKHIVARLEQ 966
N L MMKDQFANYVVQKV++ C + Q +L+ I+VH ALKKYTYGKHIVAR+E+
Sbjct: 933 NEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEK 990
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Query: 815 EHCTDEVQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLS 874
E +++ +C F + EI V + DQYG+ Q LE +E++ + ++ + L
Sbjct: 659 EFKSNKTKC-FELSEIAGHVVEFSADQYGSRFIQQKLETASMEEKTMVFNEIMPKALTLM 717
Query: 875 QHKFASNVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSE 934
F + VV+K +G + L ++ G ++LT+ + V+QK I++ +
Sbjct: 718 TDVFGNYVVQKFFEHGTAEQIRELADQLTG------HVLTLSLQMYGCRVIQKAIEVVNL 771
Query: 935 NQRATLLSHIRVHAQALKKYTYGKHIVARLEQQFEEDQ 972
+Q+ +++ + H + G H++ + + ED+
Sbjct: 772 DQKTKMVTELDGHIMRCVRDQNGNHVIQKCIECVPEDE 809
>Medtr1g094630.1 | pumilio-family RNA-binding repeatprotein | HC |
chr1:42524277-42532024 | 20130731
Length = 973
Score = 474 bits (1219), Expect = e-133, Method: Compositional matrix adjust.
Identities = 214/335 (63%), Positives = 268/335 (80%)
Query: 632 FLEELKSGKGRRFELSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASK 691
L+E K+ K + FELSDII H+V+FS DQ+GSRFIQQKLET VE+K +F E+LP A
Sbjct: 626 LLDEFKNNKTKPFELSDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARA 685
Query: 692 LMTDVFGNYVIQKFFEYGSPEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKA 751
LMTDVFGNYVIQKFFE+G+ QR+ELA+QL G +LPLSLQMYGCRVIQKALEV+D DQ++
Sbjct: 686 LMTDVFGNYVIQKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQS 745
Query: 752 QLVRELDGNVMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQ 811
Q+V EL G +M+CVRDQNGNHVIQKCIES+P +I FI+++F+GQV LS HPYGCRVIQ
Sbjct: 746 QMVSELSGAIMKCVRDQNGNHVIQKCIESVPQNRIQFIITSFYGQVVALSTHPYGCRVIQ 805
Query: 812 RVLEHCTDEVQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIV 871
RVLEHC D + I++EI++SVC LAQDQYGNYV QH+LE GKP ER+ +I KL+G IV
Sbjct: 806 RVLEHCDDLKTQEIIMEEIMQSVCTLAQDQYGNYVIQHILEHGKPNERTIVISKLAGQIV 865
Query: 872 QLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDL 931
++SQ KFASNV+EKCL +G ER+ L+ E++G ++N L MMKD F NYVVQKV++
Sbjct: 866 KMSQQKFASNVIEKCLAFGSPEERQILVNEMLGTSDENEPLQAMMKDPFGNYVVQKVLET 925
Query: 932 CSENQRATLLSHIRVHAQALKKYTYGKHIVARLEQ 966
C + +LS I+VH ALK+YTYGKHIV+R+E+
Sbjct: 926 CDDQSLELILSRIKVHLNALKRYTYGKHIVSRVEK 960
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 45/192 (23%)
Query: 643 RFELSDIIGHIVEFSADQHGSRFIQQKLETCG-VEDKALVFKEVLPRASKLMTDVFGNYV 701
+F ++ G +V S +G R IQ+ LE C ++ + ++ +E++ L D +GNYV
Sbjct: 781 QFIITSFYGQVVALSTHPYGCRVIQRVLEHCDDLKTQEIIMEEIMQSVCTLAQDQYGNYV 840
Query: 702 IQKFFEYGSPEQRRELADQLAGQILPLSLQMY---------------------------- 733
IQ E+G P +R + +LAGQI+ +S Q +
Sbjct: 841 IQHILEHGKPNERTIVISKLAGQIVKMSQQKFASNVIEKCLAFGSPEERQILVNEMLGTS 900
Query: 734 --------------GCRVIQKALEVIDHDQKAQLVRELDGNVMRCVRDQNGNHVIQKCIE 779
G V+QK LE D ++ + ++ R G H++ + +
Sbjct: 901 DENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRVEK 960
Query: 780 SIPT--KKIGFI 789
I T ++IG +
Sbjct: 961 LITTGERRIGLL 972
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 853 RGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDEQNNNL 912
+ KP E S II H+VQ S ++ S +++ L V E+ + EI+
Sbjct: 634 KTKPFELSDIID----HVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHAR----- 684
Query: 913 LTMMKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQALKKYTYGKHIVARLEQQFEEDQ 972
+M D F NYV+QK + +++QR L + + H L YG ++ + + + DQ
Sbjct: 685 -ALMTDVFGNYVIQKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQ 743
>Medtr2g097670.3 | pumilio Mpt5 protein, putative | HC |
chr2:41717566-41723738 | 20130731
Length = 917
Score = 349 bits (895), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 203/449 (45%), Positives = 273/449 (60%), Gaps = 23/449 (5%)
Query: 412 GGYTLNPTAIPQYITAYPPHGAVPLVDGASSSRYTPLTPGVST---GGSISHGAEM---V 465
GGY NP A+ ++ G +P + ++ ++PG+ + GG + G V
Sbjct: 475 GGYAGNP-AVASFMANQLGTGNMPPLFENVAAASAMVSPGMDSRILGGGLPSGVASPSDV 533
Query: 466 HANKYLGQ--FGYPMQPSFGDPYYMQYHQQPLMEGYGISGHFDPLAPRASDASQTSPYDS 523
H +G G +Q + DP Y+QY + P ++ DP R +
Sbjct: 534 HVLSRMGNQIAGGALQSPYVDPMYLQYMRTPEYAAAQLAALNDPSVDRNYLGNSYMNLLE 593
Query: 524 QKRPSTGAYLDDKRILDQRTGANINSRKGGSLTPSYFGHMPNMGFVMQYPNSPLPSPAFS 583
++ G+ L ++ + + + GGS Y+G+ P G + YP SP+ + + S
Sbjct: 594 LQKAYLGSLLSPQK---SQYNVPLGGKSGGSNHHGYYGN-PTYGVGLSYPGSPMAN-SLS 648
Query: 584 GYPEGTLGLPGGRNEMKLSPASG-RN-GGILSGWQGQRSFDSAH-DPKIVN-FLEELKSG 639
P G+ G P N++ + ASG RN G+++ W D+ + D + LEE KS
Sbjct: 649 TSPVGS-GSPIRHNDLNMHFASGMRNVAGVMAPWH----LDAVNVDENFASSLLEEFKSN 703
Query: 640 KGRRFELSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGN 699
K + FELS+I GH+VEFSADQ+GSRFIQQKLET E+K +V++E+ P A LMTDVFGN
Sbjct: 704 KTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHALALMTDVFGN 763
Query: 700 YVIQKFFEYGSPEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRELDG 759
YV+QKFFE+G QRRELA++L G +L LSLQMYGCRVIQKA+EV+D DQK ++V+ELDG
Sbjct: 764 YVVQKFFEHGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDG 823
Query: 760 NVMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTD 819
N+MRCVRDQNGNHVIQKCIE +P I FI+S F QV LS HPYGCRVIQRVLEHC +
Sbjct: 824 NIMRCVRDQNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVIQRVLEHCEN 883
Query: 820 EVQCQFIVDEILESVCALAQDQYGNYVTQ 848
Q ++DEIL +V LAQDQYGNYV Q
Sbjct: 884 PDTQQKVMDEILGAVSMLAQDQYGNYVVQ 912
Score = 100 bits (250), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 114/229 (49%), Gaps = 8/229 (3%)
Query: 699 NYVIQKFFEYGSPEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRELD 758
N+ E+ S + + +++G ++ S YG R IQ+ LE ++K + +E+
Sbjct: 691 NFASSLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIT 750
Query: 759 GNVMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCT 818
+ + + D GN+V+QK E + + + +G V LS+ YGCRVIQ+ +E
Sbjct: 751 PHALALMTDVFGNYVVQKFFEHGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIE-VV 809
Query: 819 DEVQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKF 878
D Q +V E+ ++ +DQ GN+V Q +E II +V LS H +
Sbjct: 810 DLDQKIKMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPY 869
Query: 879 ASNVVEKCLVYGDVPE-RESLIAEIIGQDEQNNNLLTMMKDQFANYVVQ 926
V+++ L + + P+ ++ ++ EI+G + + +DQ+ NYVVQ
Sbjct: 870 GCRVIQRVLEHCENPDTQQKVMDEILGA------VSMLAQDQYGNYVVQ 912
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
Query: 788 FILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEILESVCALAQDQYGNYVT 847
F LS G V S YG R IQ+ LE T E + + EI AL D +GNYV
Sbjct: 708 FELSEISGHVVEFSADQYGSRFIQQKLETATTE-EKNMVYQEITPHALALMTDVFGNYVV 766
Query: 848 QHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDE 907
Q E G +R ++ KL GH++ LS + V++K + D+ ++ ++ E+ G
Sbjct: 767 QKFFEHGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDG--- 823
Query: 908 QNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQALKKYTYGKHIVARLEQQ 967
N++ ++DQ N+V+QK I+ E+ ++S L + YG ++ R+ +
Sbjct: 824 ---NIMRCVRDQNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVIQRVLEH 880
Query: 968 FE 969
E
Sbjct: 881 CE 882
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 73/157 (46%), Gaps = 7/157 (4%)
Query: 815 EHCTDEVQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLS 874
E +++ +C F + EI V + DQYG+ Q LE +E++ + +++ H + L
Sbjct: 699 EFKSNKTKC-FELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHALALM 757
Query: 875 QHKFASNVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSE 934
F + VV+K +G +R L ++ G +LT+ + V+QK I++
Sbjct: 758 TDVFGNYVVQKFFEHGLASQRRELANKLYGH------VLTLSLQMYGCRVIQKAIEVVDL 811
Query: 935 NQRATLLSHIRVHAQALKKYTYGKHIVARLEQQFEED 971
+Q+ ++ + + + G H++ + + ED
Sbjct: 812 DQKIKMVQELDGNIMRCVRDQNGNHVIQKCIECVPED 848
>Medtr1g094630.3 | pumilio-family RNA-binding repeatprotein | HC |
chr1:42524306-42529214 | 20130731
Length = 846
Score = 333 bits (854), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 149/217 (68%), Positives = 180/217 (82%)
Query: 632 FLEELKSGKGRRFELSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASK 691
L+E K+ K + FELSDII H+V+FS DQ+GSRFIQQKLET VE+K +F E+LP A
Sbjct: 626 LLDEFKNNKTKPFELSDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARA 685
Query: 692 LMTDVFGNYVIQKFFEYGSPEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKA 751
LMTDVFGNYVIQKFFE+G+ QR+ELA+QL G +LPLSLQMYGCRVIQKALEV+D DQ++
Sbjct: 686 LMTDVFGNYVIQKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQS 745
Query: 752 QLVRELDGNVMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQ 811
Q+V EL G +M+CVRDQNGNHVIQKCIES+P +I FI+++F+GQV LS HPYGCRVIQ
Sbjct: 746 QMVSELSGAIMKCVRDQNGNHVIQKCIESVPQNRIQFIITSFYGQVVALSTHPYGCRVIQ 805
Query: 812 RVLEHCTDEVQCQFIVDEILESVCALAQDQYGNYVTQ 848
RVLEHC D + I++EI++SVC LAQDQYGNYV Q
Sbjct: 806 RVLEHCDDLKTQEIIMEEIMQSVCTLAQDQYGNYVIQ 842
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 111/212 (52%), Gaps = 9/212 (4%)
Query: 716 ELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRELDGNVMRCVRDQNGNHVIQ 775
EL+D + ++ S YG R IQ+ LE ++K ++ E+ + + D GN+VIQ
Sbjct: 639 ELSD-IIDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMTDVFGNYVIQ 697
Query: 776 KCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEILESVC 835
K E + + + G V LS+ YGCRVIQ+ LE + Q Q +V E+ ++
Sbjct: 698 KFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQSQ-MVSELSGAIM 756
Query: 836 ALAQDQYGNYVTQHVLERGKPQERSQ-IIGKLSGHIVQLSQHKFASNVVEKCLVYGDVPE 894
+DQ GN+V Q +E PQ R Q II G +V LS H + V+++ L + D +
Sbjct: 757 KCVRDQNGNHVIQKCIE-SVPQNRIQFIITSFYGQVVALSTHPYGCRVIQRVLEHCDDLK 815
Query: 895 RESLIAEIIGQDEQNNNLLTMMKDQFANYVVQ 926
+ +I E I Q ++ T+ +DQ+ NYV+Q
Sbjct: 816 TQEIIMEEIMQ-----SVCTLAQDQYGNYVIQ 842
Score = 90.5 bits (223), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 7/183 (3%)
Query: 788 FILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEILESVCALAQDQYGNYVT 847
F LS V S YG R IQ+ LE + E + + I EIL AL D +GNYV
Sbjct: 638 FELSDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTK-IFPEILPHARALMTDVFGNYVI 696
Query: 848 QHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDE 907
Q E G +R ++ +L+GH++ LS + V++K L DV ++ +++E+ G
Sbjct: 697 QKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQSQMVSELSGA-- 754
Query: 908 QNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQALKKYTYGKHIVARLEQQ 967
++ ++DQ N+V+QK I+ +N+ +++ AL + YG ++ R+ +
Sbjct: 755 ----IMKCVRDQNGNHVIQKCIESVPQNRIQFIITSFYGQVVALSTHPYGCRVIQRVLEH 810
Query: 968 FEE 970
++
Sbjct: 811 CDD 813
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 853 RGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDEQNNNL 912
+ KP E S II H+VQ S ++ S +++ L V E+ + EI+
Sbjct: 634 KTKPFELSDIID----HVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHAR----- 684
Query: 913 LTMMKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQALKKYTYGKHIVARLEQQFEEDQ 972
+M D F NYV+QK + +++QR L + + H L YG ++ + + + DQ
Sbjct: 685 -ALMTDVFGNYVIQKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQ 743
>Medtr5g063650.1 | pumilio-family RNA-binding repeatprotein | LC |
chr5:26380049-26384328 | 20130731
Length = 712
Score = 180 bits (457), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 179/323 (55%), Gaps = 13/323 (4%)
Query: 646 LSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQKF 705
L ++ ++ + DQ+G RF+Q +E VED +VF V+ +LM D FGNY++QK
Sbjct: 393 LPELQSYMFHMAKDQNGGRFLQGMVEKGTVEDMEMVFNGVIDNVVELMMDPFGNYLVQKL 452
Query: 706 FEYGSPEQRRELADQLA---GQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRE--LDGN 760
E+ +QR ++ L GQ++ S +G R +QK + + ++ LVR L G
Sbjct: 453 LEFCRDDQRLQIVLMLTKVPGQLVRTSFNTHGTRSVQKLISTLKSRRQIALVRSAILPG- 511
Query: 761 VMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDE 820
+ V+D NGNHVIQ+C+ + FI A + +++ H +GC V+QR ++ +
Sbjct: 512 FLDLVKDLNGNHVIQRCLSCWSVQDNEFIFDAATKFLTDVATHQHGCCVLQRCIDFSKGK 571
Query: 821 VQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFAS 880
+ +V EI + +LAQD YGNYV Q+++E P +++ + G+ V LS KF+S
Sbjct: 572 -SLEKLVKEICKHGFSLAQDPYGNYVIQYIIELQIPSAMAKLTPQFKGNYVILSTQKFSS 630
Query: 881 NVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRATL 940
+VVEKCL+Y V R ++ E++ + +++D +ANYVVQK ++ + A+L
Sbjct: 631 HVVEKCLIY-IVETRARIVQELLSVP----HFERLLQDPYANYVVQKALEYTKGSLHASL 685
Query: 941 LSHIRVHAQALKKYTYGKHIVAR 963
+ +R H + L+ Y K I ++
Sbjct: 686 VEAVRAH-KILRTSPYCKRIFSK 707
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 13/204 (6%)
Query: 620 SFDSAHDPKIVNFLEELKSGKGRRFELSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKA 679
SF++ + + LKS + S I+ ++ D +G+ IQ+ L V+D
Sbjct: 479 SFNTHGTRSVQKLISTLKSRRQIALVRSAILPGFLDLVKDLNGNHVIQRCLSCWSVQDNE 538
Query: 680 LVFKEVLPRASKLMTDV----FGNYVIQKFFEYGSPEQRRELADQLAGQILPLSLQMYGC 735
+F A+K +TDV G V+Q+ ++ + +L ++ L+ YG
Sbjct: 539 FIFDA----ATKFLTDVATHQHGCCVLQRCIDFSKGKSLEKLVKEICKHGFSLAQDPYGN 594
Query: 736 RVIQKALEVIDHDQKAQLVRELDGNVMRCVRDQNGNHVIQKCIESIPTKKIGFI---LSA 792
VIQ +E+ A+L + GN + + +HV++KC+ I + + LS
Sbjct: 595 YVIQYIIELQIPSAMAKLTPQFKGNYVILSTQKFSSHVVEKCLIYIVETRARIVQELLSV 654
Query: 793 FHGQVANLSMHPYGCRVIQRVLEH 816
H + L PY V+Q+ LE+
Sbjct: 655 PHFE--RLLQDPYANYVVQKALEY 676
>Medtr2g008770.1 | pumilio-family RNA-binding repeatprotein | LC |
chr2:1611979-1606856 | 20130731
Length = 745
Score = 172 bits (436), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 168/316 (53%), Gaps = 9/316 (2%)
Query: 651 GHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQKFFEYGS 710
G I + DQ+G RF+Q+ + +ED ++F E++ +LM FGNY+I+K + S
Sbjct: 429 GCIYLMAKDQNGGRFLQRMFDEGRMEDIQMIFNEIIGHVVELMMSPFGNYLIRKLLDVCS 488
Query: 711 PEQRRE---LADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLV-RELDGNVMRCVR 766
EQR + + Q GQ++ +SL +G RV+QK +E + Q+ LV L+ + ++
Sbjct: 489 EEQRMQIILMVIQEPGQLVRISLNTHGTRVVQKLIETLKTKQQVSLVVSALEPGFLILIK 548
Query: 767 DQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFI 826
D NGNHV+Q C+E + FI A +++ H +GC V+ + + + + E + Q +
Sbjct: 549 DNNGNHVVQHCLEYLRNGDNKFIFVAAARHCIDIATHQHGCCVLPKCIRYSSGEHR-QRL 607
Query: 827 VDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKC 886
V EI + LAQD+YGNYV Q+VL+ P + + + G+ V +S KF+S VVEKC
Sbjct: 608 VAEISANALLLAQDKYGNYVVQYVLDFRIPSAATTLTRQFEGNYVHMSMQKFSSRVVEKC 667
Query: 887 LVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHIRV 946
LV + R +I E++ + +++D ANYV+QK + + L+ I
Sbjct: 668 LVVFNDENRAKIIHELLSDPHFD----LLLQDPHANYVIQKALRHSEGHVYNLLVEKIES 723
Query: 947 HAQALKKYTYGKHIVA 962
+ + Y K I +
Sbjct: 724 YKAICRNSPYSKKIFS 739
>Medtr1g094630.2 | pumilio-family RNA-binding repeatprotein | HC |
chr1:42524306-42528433 | 20130731
Length = 787
Score = 168 bits (426), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 90/110 (81%)
Query: 632 FLEELKSGKGRRFELSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASK 691
L+E K+ K + FELSDII H+V+FS DQ+GSRFIQQKLET VE+K +F E+LP A
Sbjct: 657 LLDEFKNNKTKPFELSDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARA 716
Query: 692 LMTDVFGNYVIQKFFEYGSPEQRRELADQLAGQILPLSLQMYGCRVIQKA 741
LMTDVFGNYVIQKFFE+G+ QR+ELA+QL G +LPLSLQMYGCRVIQK
Sbjct: 717 LMTDVFGNYVIQKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKV 766
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 788 FILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEILESVCALAQDQYGNYVT 847
F LS V S YG R IQ+ LE + E + + I EIL AL D +GNYV
Sbjct: 669 FELSDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTK-IFPEILPHARALMTDVFGNYVI 727
Query: 848 QHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKC---LVYGD 891
Q E G +R ++ +L+GH++ LS + V++K L++ D
Sbjct: 728 QKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKVHFKLIFSD 774
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 716 ELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRELDGNVMRCVRDQNGNHVIQ 775
EL+D + ++ S YG R IQ+ LE ++K ++ E+ + + D GN+VIQ
Sbjct: 670 ELSD-IIDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMTDVFGNYVIQ 728
Query: 776 KCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRV 813
K E + + + G V LS+ YGCRVIQ+V
Sbjct: 729 KFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKV 766
>Medtr3g102650.1 | pumilio-family RNA-binding repeatprotein | LC |
chr3:47305805-47309075 | 20130731
Length = 554
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 149/321 (46%), Gaps = 11/321 (3%)
Query: 651 GHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQKFFEYGS 710
G + + D HGS+ +Q+ +E G E + F E++ +LM D G VI K E +
Sbjct: 214 GRVYSLAKDTHGSKILQEVMENLGPEGVSYFFLELINHMCELMVDPIGYEVITKMVEVCN 273
Query: 711 PEQRRE---LADQLAGQILPLSLQMYGCRVIQKALE-VIDHDQKAQLVRELDGNVMRCVR 766
+Q+ + L Q + + L ++G R ++K LE V +Q+ ++ L + +
Sbjct: 274 QDQKTQIVLLVTHHGAQFIRICLSLHGSRSVEKLLEKVTTREQRGLIMSALTPGAIVLSK 333
Query: 767 DQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFI 826
D NG+ V+ C+++ P L +LS GC V+Q + H + +
Sbjct: 334 DINGHRVVFNCLKNFPHADTEKFLGVIARNSLSLSRDKTGCCVLQYCVSHAQGATK-NLL 392
Query: 827 VDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKC 886
+ EI+ LA+D YGNYV QH++ P + +L V LS +K+ SNVVEK
Sbjct: 393 IHEIILHAPLLAEDCYGNYVIQHLISLKIPTVSGNLHHQLQQQFVSLSCNKYGSNVVEKF 452
Query: 887 LVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQ--RATLLSHI 944
L V +I E++ N+ ++ D + N+V+ ++ + + L +
Sbjct: 453 LHDSGVDISSCIIIELLNDP----NVTRLLTDPYGNFVISTALNKFKGARFIKNALEELV 508
Query: 945 RVHAQALKKYTYGKHIVARLE 965
++Q ++ +GK ++ + E
Sbjct: 509 EANSQMMRSNMFGKKVLDKFE 529
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 81/190 (42%), Gaps = 9/190 (4%)
Query: 629 IVNFLEELKSGKGRRFELSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPR 688
+ N L+ +F L I + + S D+ G +Q + K L+ E++
Sbjct: 341 VFNCLKNFPHADTEKF-LGVIARNSLSLSRDKTGCCVLQYCVSHAQGATKNLLIHEIILH 399
Query: 689 ASKLMTDVFGNYVIQKFFEYGSPEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHD 748
A L D +GNYVIQ P L QL Q + LS YG V++K L D
Sbjct: 400 APLLAEDCYGNYVIQHLISLKIPTVSGNLHHQLQQQFVSLSCNKYGSNVVEKFLHDSGVD 459
Query: 749 QKAQLVREL--DGNVMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQV-ANLSM--- 802
+ ++ EL D NV R + D GN VI + K FI +A V AN M
Sbjct: 460 ISSCIIIELLNDPNVTRLLTDPYGNFVISTALNKF--KGARFIKNALEELVEANSQMMRS 517
Query: 803 HPYGCRVIQR 812
+ +G +V+ +
Sbjct: 518 NMFGKKVLDK 527
>Medtr1g106975.1 | pumilio-family RNA-binding repeatprotein | LC |
chr1:48418651-48415981 | 20130731
Length = 465
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 157/320 (49%), Gaps = 13/320 (4%)
Query: 651 GHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQKFFEYGS 710
G +V + ++ R+IQQK+ D AL+ EV LMT +GN++IQK FE
Sbjct: 134 GSLVSMAMNRRDCRYIQQKIRMGNPTDVALILYEVKDSLHMLMTHPYGNHLIQKIFEARR 193
Query: 711 PEQRRELADQLAGQILP-------LSLQMYGCRVIQKALEVIDHD-QKAQLVRELDGNVM 762
R+ L I+ + + +G RV+Q L+ I + +V + +
Sbjct: 194 GIITRDQKHSLVYLIISNYQKLRNVCMDFHGTRVMQIMLKNIKCLFMQYVVVYTMKHITV 253
Query: 763 RCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQ 822
+++ NG++VI +C++ P + IL ++S + G VIQ+ L
Sbjct: 254 ALMKNFNGSYVIVECLKLFPPEHQNIILDEVARNCVDISTNKVGTSVIQKCLRKGAITAI 313
Query: 823 CQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNV 882
+V +I+ + LA+DQYGNYV + V+ Q++ +L G V+LS +K+ASNV
Sbjct: 314 AP-LVAKIISNAMILAEDQYGNYVLKCVIMMKFASANEQMVKELRGQFVRLSVNKYASNV 372
Query: 883 VEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLS 942
VE L + + + E ++ EII +++ L +++D F NYV Q+ + + R L +
Sbjct: 373 VENLLTFSKLDDVEVIVEEIIS----SHDFLNVLQDPFGNYVAQRSLKCTQGHLRRKLSN 428
Query: 943 HIRVHAQALKKYTYGKHIVA 962
I + + L + YGK ++
Sbjct: 429 LIISNHRTLHSHPYGKKVLT 448
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 132/267 (49%), Gaps = 21/267 (7%)
Query: 709 GSPEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRELDGNVMRCVRDQ 768
+ QR G ++ +++ CR IQ+ + + + A ++ E+ ++ +
Sbjct: 120 ATAAQRMHCFHTCRGSLVSMAMNRRDCRYIQQKIRMGNPTDVALILYEVKDSLHMLMTHP 179
Query: 769 NGNHVIQKCIES---IPTK----KIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEV 821
GNH+IQK E+ I T+ + +++ + + ++ N+ M +G RV+Q +L+ +
Sbjct: 180 YGNHLIQKIFEARRGIITRDQKHSLVYLIISNYQKLRNVCMDFHGTRVMQIMLK----NI 235
Query: 822 QCQF----IVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHK 877
+C F +V + AL ++ G+YV L+ P+ ++ I+ +++ + V +S +K
Sbjct: 236 KCLFMQYVVVYTMKHITVALMKNFNGSYVIVECLKLFPPEHQNIILDEVARNCVDISTNK 295
Query: 878 FASNVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQR 937
++V++KCL G + L+A+II +N + + +DQ+ NYV++ VI + +
Sbjct: 296 VGTSVIQKCLRKGAITAIAPLVAKII------SNAMILAEDQYGNYVLKCVIMMKFASAN 349
Query: 938 ATLLSHIRVHAQALKKYTYGKHIVARL 964
++ +R L Y ++V L
Sbjct: 350 EQMVKELRGQFVRLSVNKYASNVVENL 376
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 8/170 (4%)
Query: 646 LSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQKF 705
L ++ + V+ S ++ G+ IQ+ L + A + +++ A L D +GNYV++
Sbjct: 281 LDEVARNCVDISTNKVGTSVIQKCLRKGAITAIAPLVAKIISNAMILAEDQYGNYVLKCV 340
Query: 706 FEYGSPEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVREL--DGNVMR 763
++ +L GQ + LS+ Y V++ L D +V E+ + +
Sbjct: 341 IMMKFASANEQMVKELRGQFVRLSVNKYASNVVENLLTFSKLDDVEVIVEEIISSHDFLN 400
Query: 764 CVRDQNGNHVIQ---KCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVI 810
++D GN+V Q KC + +K+ ++ + H L HPYG +V+
Sbjct: 401 VLQDPFGNYVAQRSLKCTQGHLRRKLSNLIISNH---RTLHSHPYGKKVL 447
>Medtr5g062070.1 | pumilio-family RNA-binding repeatprotein | LC |
chr5:25781137-25777781 | 20130731
Length = 349
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 140/284 (49%), Gaps = 15/284 (5%)
Query: 673 CGVEDKALV-----FKEVLPRASKLMTDVFGNYVIQKFFEYGSPEQRRELADQLA---GQ 724
C V D L+ F EV+ K D F + ++Q E+G +QR ++ +L Q
Sbjct: 8 CLVVDWTLIDIDTMFNEVIGDVVKQTLDPFMSNIVQHVLEFGRDDQRLKIVRKLTQHPDQ 67
Query: 725 ILPLSLQMYGCRVIQKALEVIDHDQKAQLVR-ELDGNVMRCVRDQNGNHVIQKCIESIPT 783
++ SL YG + +QK + + ++ LV L + V D +GN V+Q+C+
Sbjct: 68 LVEASLDSYGTKCVQKLISTHNSKKEIALVSYSLLSGFLYLVMDLDGNQVLQRCLSCWSV 127
Query: 784 KKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEILESVCALAQDQYG 843
+ FI A ++ +GC ++QR +E Q Q +V EI + LAQ +YG
Sbjct: 128 EDNEFIYDAATRFCYAVATDEHGCCLLQRCIEFSNGNSQ-QKLVKEICKYAFHLAQHEYG 186
Query: 844 NYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAEII 903
N++ Q++++ P +++ + +G VQLS KF+ +VVEKCL + V R ++ E +
Sbjct: 187 NHIVQYIIQMQNPSAIAELTAQFNGKYVQLSMQKFSIHVVEKCLEHI-VETRARIVQEFL 245
Query: 904 GQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHIRVH 947
N +++D +ANYVVQ + + +L+ +R H
Sbjct: 246 AVPYFEN----LLQDPYANYVVQCALKFTEGSLHESLVETVRSH 285
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 105/221 (47%), Gaps = 7/221 (3%)
Query: 653 IVEFSADQHGSRFIQQKLETCGVEDK-ALVFKEVLPRASKLMTDVFGNYVIQKFFEYGSP 711
+VE S D +G++ +Q+ + T + + ALV +L L+ D+ GN V+Q+ S
Sbjct: 68 LVEASLDSYGTKCVQKLISTHNSKKEIALVSYSLLSGFLYLVMDLDGNQVLQRCLSCWSV 127
Query: 712 EQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRELDGNVMRCVRDQNGN 771
E + D ++ +GC ++Q+ +E + + + +LV+E+ + + GN
Sbjct: 128 EDNEFIYDAATRFCYAVATDEHGCCLLQRCIEFSNGNSQQKLVKEICKYAFHLAQHEYGN 187
Query: 772 HVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTD---EVQCQFIVD 828
H++Q I+ I + + F+G+ LSM + V+++ LEH + + +F+
Sbjct: 188 HIVQYIIQMQNPSAIAELTAQFNGKYVQLSMQKFSIHVVEKCLEHIVETRARIVQEFLAV 247
Query: 829 EILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGH 869
E+ L QD Y NYV Q L+ + ++ + H
Sbjct: 248 PYFEN---LLQDPYANYVVQCALKFTEGSLHESLVETVRSH 285
>Medtr2g006930.1 | pumilio-family RNA-binding repeatprotein | LC |
chr2:729409-732877 | 20130731
Length = 434
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 156/319 (48%), Gaps = 11/319 (3%)
Query: 651 GHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQKFFE--Y 708
G +V + + +++Q ++ ++ EV +LMT FG+Y+IQK F+
Sbjct: 107 GFVVSMAMNHRECQYLQAVIDEGNPVYVTMILLEVKDYLHELMTHRFGSYLIQKIFQARR 166
Query: 709 GSPEQRRELADQLA----GQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRELDGNV-MR 763
G Q+ +L L ++ + + +G R +Q + + H +V + ++ +
Sbjct: 167 GMTCQQMDLTVFLIISNHRKLKDVCMDHHGTRAMQTMIANVRHPFTGYVVVYMLQHITIP 226
Query: 764 CVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQC 823
+++ NG++VI +C++ P K IL +++ GC +++ L++
Sbjct: 227 LMKNVNGSYVIVQCVKFFPPKHKKIILDEVARNCVDIATDKIGCSAVKKCLDYGGRTSAI 286
Query: 824 QFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVV 883
+V +I+ + L++D YGNYV Q V++ P Q++ +L +LS +K+ASNVV
Sbjct: 287 DILVAQIISNAMILSEDPYGNYVVQRVIQMKIPLANEQMVQELRSKFDRLSVNKYASNVV 346
Query: 884 EKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSH 943
E L + + + + EI+ ++ N L ++ D + NYV Q+ + + R S
Sbjct: 347 EYLLSFSNQDAVKVIAEEIM----RSRNFLNVLHDPYGNYVAQRALRCTKGHVRRRFSSL 402
Query: 944 IRVHAQALKKYTYGKHIVA 962
I+ H AL+ + YGK+++
Sbjct: 403 IKSHRLALQSHIYGKNVLT 421
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 109/245 (44%), Gaps = 7/245 (2%)
Query: 655 EFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASK-LMTDVFGNYVIQKFFEYGSPEQ 713
+ D HG+R +Q + V +L + LM +V G+YVI + ++ P+
Sbjct: 189 DVCMDHHGTRAMQTMIANVRHPFTGYVVVYMLQHITIPLMKNVNGSYVIVQCVKFFPPKH 248
Query: 714 RRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQ-LVRELDGNVMRCVRDQNGNH 772
++ + D++A + ++ GC ++K L+ LV ++ N M D GN+
Sbjct: 249 KKIILDEVARNCVDIATDKIGCSAVKKCLDYGGRTSAIDILVAQIISNAMILSEDPYGNY 308
Query: 773 VIQKCIE-SIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEIL 831
V+Q+ I+ IP + + LS++ Y V++ +L +++ + I +EI+
Sbjct: 309 VVQRVIQMKIPLANEQMV-QELRSKFDRLSVNKYASNVVEYLLSF-SNQDAVKVIAEEIM 366
Query: 832 ES--VCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVY 889
S + D YGNYV Q L K R + + H + L H + NV+ + Y
Sbjct: 367 RSRNFLNVLHDPYGNYVAQRALRCTKGHVRRRFSSLIKSHRLALQSHIYGKNVLTLAMAY 426
Query: 890 GDVPE 894
+ E
Sbjct: 427 TEGSE 431
>Medtr1g100230.1 | pumilio-like protein | LC |
chr1:45172367-45174672 | 20130731
Length = 416
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 147/318 (46%), Gaps = 14/318 (4%)
Query: 653 IVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQKFFEYGS-- 710
++ + D G +++Q K+E D + V +LMT NY+I+K F+ S
Sbjct: 94 VLSMAMDWRGCQYLQAKIEKGNPADVEFILSIVKDHVHQLMTH-NNNYLIKKIFQARSGV 152
Query: 711 -PEQRRELADQLAG---QILPLSLQMYGCRVIQKALEVI--DHDQKAQLVRELDGNVMRC 764
PEQ + + ++ + + G RV+Q L+ I +V + +
Sbjct: 153 TPEQMESIVLSIISDDQKLKHVCMDNRGTRVMQNMLKNIKLSFTTYNVVVCTMHRITLAL 212
Query: 765 VRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQ 824
V+ NG +VI +C++ ++ IL +++ GC +IQ+ L V+
Sbjct: 213 VKSFNGGYVILQCLKFFQSEHKRVILDQVARNCVDITTDKIGCSIIQKCLSLVEGSVK-S 271
Query: 825 FIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVE 884
+V EI+ + LA+D YGNYV Q V+ R ++I +L G + S K +SNVVE
Sbjct: 272 LLVTEIISNAMILAEDPYGNYVLQFVITMESSATREKMIKQLRGKFARFSMSKHSSNVVE 331
Query: 885 KCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHI 944
L + + E+ +A I+ + ++ + L +++D F NYV Q+ + L I
Sbjct: 332 DLLRFSN----ENDVAVIVEEIMKSCDFLNVVQDPFGNYVAQRALKCTKGRLHRELAKLI 387
Query: 945 RVHAQALKKYTYGKHIVA 962
+ + L+ + YGK ++
Sbjct: 388 TSNKRILQSHLYGKRVLT 405
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 2/171 (1%)
Query: 642 RRFELSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYV 701
+R L + + V+ + D+ G IQ+ L K+L+ E++ A L D +GNYV
Sbjct: 234 KRVILDQVARNCVDITTDKIGCSIIQKCLSLVEGSVKSLLVTEIISNAMILAEDPYGNYV 293
Query: 702 IQKFFEYGSPEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVREL--DG 759
+Q S R ++ QL G+ S+ + V++ L + + A +V E+
Sbjct: 294 LQFVITMESSATREKMIKQLRGKFARFSMSKHSSNVVEDLLRFSNENDVAVIVEEIMKSC 353
Query: 760 NVMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVI 810
+ + V+D GN+V Q+ ++ + + L H YG RV+
Sbjct: 354 DFLNVVQDPFGNYVAQRALKCTKGRLHRELAKLITSNKRILQSHLYGKRVL 404
>Medtr2g006940.1 | pumilio-like protein | LC | chr2:736512-738484 |
20130731
Length = 379
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 124/282 (43%), Gaps = 25/282 (8%)
Query: 651 GHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQKFFEYGS 710
G +V + + +++ ++ + A++ +V LM FG+ +I+K FE
Sbjct: 114 GSVVSMAITERDCQYLHAIIDEGNPTNAAMILSKVKDYLHDLMMHRFGSTLIKKIFE-AK 172
Query: 711 PEQRRELADQLAGQILP-------LSLQMYGCRVIQKALEVIDH-DQKAQLVRELDGNVM 762
E D + IL + + YG RV+Q L H K + + N
Sbjct: 173 KGMAMEQMDSIVYLILANDRKMWDVCINYYGTRVMQTILHNTRHPFMKFVVAYAVKRNTT 232
Query: 763 RCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQ 822
+++ NG+HVI +C++ P+ IL N++ GC ++R L+H +
Sbjct: 233 ALMKNTNGSHVIVQCVKLFPSILKKMILDEVARNCCNIATDKIGCLAVKRCLKH-GEGTA 291
Query: 823 CQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNV 882
+V +I+ N + +V++ P + +I + +LS +K+ASNV
Sbjct: 292 IDLLVTQII-----------SNAMVLYVIKMKFPLAKEWMIEEFQNKFDRLSMNKYASNV 340
Query: 883 VEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYV 924
+E L + + + ++ EI+ ++ N L +++D F NYV
Sbjct: 341 MEYLLRFSNKSAVKVIVEEIM----RSRNFLKVLQDPFGNYV 378