Miyakogusa Predicted Gene

Lj6g3v1333100.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1333100.1 Non Characterized Hit- tr|I1LVM4|I1LVM4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32283
PE,40.14,1e-17,seg,NULL,CUFF.59354.1
         (163 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g037970.3 | hypothetical protein | HC | chr2:16473870-1647...   147   4e-36
Medtr2g037970.1 | hypothetical protein | HC | chr2:16473870-1647...   147   4e-36
Medtr2g037970.2 | hypothetical protein | HC | chr2:16473902-1647...   147   4e-36

>Medtr2g037970.3 | hypothetical protein | HC |
           chr2:16473870-16477915 | 20130731
          Length = 175

 Score =  147 bits (371), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 87/180 (48%), Positives = 110/180 (61%), Gaps = 28/180 (15%)

Query: 3   SAFFSKVKPLYRNPFPSSNSMAVCHRHRSSRATKATLTEID-------------AEHEVT 49
           ++F SK K L+ NP   SN   +  RHRSSRAT   L EID              EHE+T
Sbjct: 2   ASFISKSKTLFTNP---SNFTTI--RHRSSRAT-GKLYEIDTSSSSSSQSLSSEGEHEMT 55

Query: 50  LKMFDDLIQRILVKKATPDWLPFLPGYSFWXXXXXXXXXXXHLAHRFNSSDQPQ-----D 104
           LK+FDDLI RILVKKATPDWLPF+PG SFW           HL H+    ++       +
Sbjct: 56  LKLFDDLIHRILVKKATPDWLPFVPGSSFWVPPRPTPSNVVHLVHKLTDDERQSPFENDE 115

Query: 105 ALNLESHHGWPDPNYFLQGNAPAHSGESGVELNLPE--EGTVKVKVITFSDNVANSEDEE 162
           +L++ S  GWP  NYF++G    H G+SGVEL +PE  EG VKVKV+TF +N+A+SEDE+
Sbjct: 116 SLSISSLRGWPSSNYFIKGT--VHGGDSGVELKIPEGIEGPVKVKVLTFPENLAHSEDED 173


>Medtr2g037970.1 | hypothetical protein | HC |
           chr2:16473870-16478274 | 20130731
          Length = 175

 Score =  147 bits (371), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 87/180 (48%), Positives = 110/180 (61%), Gaps = 28/180 (15%)

Query: 3   SAFFSKVKPLYRNPFPSSNSMAVCHRHRSSRATKATLTEID-------------AEHEVT 49
           ++F SK K L+ NP   SN   +  RHRSSRAT   L EID              EHE+T
Sbjct: 2   ASFISKSKTLFTNP---SNFTTI--RHRSSRAT-GKLYEIDTSSSSSSQSLSSEGEHEMT 55

Query: 50  LKMFDDLIQRILVKKATPDWLPFLPGYSFWXXXXXXXXXXXHLAHRFNSSDQPQ-----D 104
           LK+FDDLI RILVKKATPDWLPF+PG SFW           HL H+    ++       +
Sbjct: 56  LKLFDDLIHRILVKKATPDWLPFVPGSSFWVPPRPTPSNVVHLVHKLTDDERQSPFENDE 115

Query: 105 ALNLESHHGWPDPNYFLQGNAPAHSGESGVELNLPE--EGTVKVKVITFSDNVANSEDEE 162
           +L++ S  GWP  NYF++G    H G+SGVEL +PE  EG VKVKV+TF +N+A+SEDE+
Sbjct: 116 SLSISSLRGWPSSNYFIKGT--VHGGDSGVELKIPEGIEGPVKVKVLTFPENLAHSEDED 173


>Medtr2g037970.2 | hypothetical protein | HC |
           chr2:16473902-16477916 | 20130731
          Length = 175

 Score =  147 bits (371), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 87/180 (48%), Positives = 110/180 (61%), Gaps = 28/180 (15%)

Query: 3   SAFFSKVKPLYRNPFPSSNSMAVCHRHRSSRATKATLTEID-------------AEHEVT 49
           ++F SK K L+ NP   SN   +  RHRSSRAT   L EID              EHE+T
Sbjct: 2   ASFISKSKTLFTNP---SNFTTI--RHRSSRAT-GKLYEIDTSSSSSSQSLSSEGEHEMT 55

Query: 50  LKMFDDLIQRILVKKATPDWLPFLPGYSFWXXXXXXXXXXXHLAHRFNSSDQPQ-----D 104
           LK+FDDLI RILVKKATPDWLPF+PG SFW           HL H+    ++       +
Sbjct: 56  LKLFDDLIHRILVKKATPDWLPFVPGSSFWVPPRPTPSNVVHLVHKLTDDERQSPFENDE 115

Query: 105 ALNLESHHGWPDPNYFLQGNAPAHSGESGVELNLPE--EGTVKVKVITFSDNVANSEDEE 162
           +L++ S  GWP  NYF++G    H G+SGVEL +PE  EG VKVKV+TF +N+A+SEDE+
Sbjct: 116 SLSISSLRGWPSSNYFIKGT--VHGGDSGVELKIPEGIEGPVKVKVLTFPENLAHSEDED 173