Miyakogusa Predicted Gene

Lj6g3v1333010.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1333010.2 Non Characterized Hit- tr|K3WGX2|K3WGX2_PYTUL
Uncharacterized protein OS=Pythium ultimum GN=PYU1_G00,26.99,4e-17,no
description,Zinc finger, RING/FYVE/PHD-type; no
description,Homeodomain-like; seg,NULL; PHD,Zinc ,CUFF.59393.2
         (721 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g038000.1 | pathogenesis-related homeodomain-like protein,...   795   0.0  
Medtr1g107015.3 | homeobox KN domain protein | HC | chr1:4844764...   205   2e-52
Medtr1g107015.4 | homeobox KN domain protein | HC | chr1:4844764...   205   2e-52
Medtr1g107015.2 | homeobox KN domain protein | HC | chr1:4844771...   204   2e-52
Medtr1g107015.1 | homeobox KN domain protein | HC | chr1:4844666...   204   2e-52
Medtr3g088665.1 | PHD-finger protein | LC | chr3:40402136-404074...    52   2e-06

>Medtr2g038000.1 | pathogenesis-related homeodomain-like protein,
           putative | HC | chr2:16499640-16505838 | 20130731
          Length = 707

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/718 (60%), Positives = 506/718 (70%), Gaps = 15/718 (2%)

Query: 6   LQGTEKLNGTGSTKSSNSEEHAESKVDSLRYRTNITXXXXXXXXXXXXXXXXXXXXXASG 65
           ++ TE+LN  GSTK SN++EH + KVDS +++T+ T                     AS 
Sbjct: 1   MRDTERLNNQGSTKPSNTKEHIKLKVDSPQFKTSSTKHQRKKHRLKSKSHKLGGCTNASV 60

Query: 66  RTVTNSSIKRQVKDSSNKKIIRQSLHKTDGKSSRMLSSTMIQGGKSSLGSRKEG-KDV-D 123
           RT T+SS K   KDSSNK         TD  S+++  S  IQGGK+SL + ++G KDV D
Sbjct: 61  RTATDSSNKASTKDSSNK---------TDRNSTQVQPSKKIQGGKTSLNNDRKGEKDVVD 111

Query: 124 GEVMVQKVXXXXXXXXXXXXXXXXXXXXXXXXXXYLLIKMKLEQNLIDAYSGEGWKGQSR 183
            E  +QK                            +LI+MK EQNLIDAY+GEGWKGQSR
Sbjct: 112 QEGNIQKRKRRRKKKRQRHNVDLDDTVRLQRRTRNILIRMKQEQNLIDAYAGEGWKGQSR 171

Query: 184 EKIRPEKELQRAKKQILNCKLSIRDAIRQLDSLSSLGSIEDSVIDPDGSVYHEHIFCANC 243
           EKIRPE ELQRAKKQIL CKLSIRDAI QLDSLSS+GSIE SVI  DGSV HEHIFCANC
Sbjct: 172 EKIRPEMELQRAKKQILKCKLSIRDAIHQLDSLSSVGSIEGSVIATDGSVSHEHIFCANC 231

Query: 244 KLREAFPDNDIILCDGTCNRAFHQRCLNPPLDTENIPPGDQGWFCNFCECKIEILEATNA 303
           K+ E  PDNDIILCDGTCNRAFHQRCL+PPL+TE+IPP DQGWFC +C+CKIEILEATNA
Sbjct: 232 KINEVSPDNDIILCDGTCNRAFHQRCLDPPLETEDIPPEDQGWFCKYCDCKIEILEATNA 291

Query: 304 HLGTQISLDSTWQDVFKEEAAIPDGDNALLNXXXXXXXXXXXXXXXXXXXXXXNH-SIKA 362
           HLGT+  LDSTWQDVFKEEAAIPDGD ALLN                      +H     
Sbjct: 292 HLGTRFPLDSTWQDVFKEEAAIPDGDAALLNQEEEWPSDDPEDDDYNPERKEESHGGFNT 351

Query: 363 EGTXXXXXXXXXXXXXXXXXXXECSPVDEGTGLEYYSVNCCIDSDDSGEIACGRRQRKSV 422
           EG                    ECS +DEG  LEYYS N  IDSD+SGEIACGRRQR++V
Sbjct: 352 EGNDKNASDDSSSSSSMWSLNGECSLLDEGINLEYYS-NDHIDSDESGEIACGRRQRRAV 410

Query: 423 DYKKLYDEMFGKDAPPCELVSEDEDWGTGKRKRREKESDAVNTLMTMHXXXXXXXXXXXX 482
           DYKKLYDEMFGKDAPPCE VSEDEDWG  KR+RREKES+AVNTLMT+H            
Sbjct: 411 DYKKLYDEMFGKDAPPCEQVSEDEDWGPRKRRRREKESEAVNTLMTLHESENKYPNNKNN 470

Query: 483 DGIREGSSGKPIRRSCFRIPHDALEKLRQVFAENELPPRSVKEGLSKELGIDAAKVSKWF 542
           D IR  SSG  I+R CFR  H+A+EKLRQVFAENELPP+SVK+ LSKELG+DAAKV+KWF
Sbjct: 471 DRIRGNSSG--IKRPCFRFSHEAVEKLRQVFAENELPPKSVKDALSKELGLDAAKVNKWF 528

Query: 543 KNARYFALKARKYQAGGEQLQSFTSKTPKDSRSQNVDKDELLKSMASKITVTQYQKNGKN 602
           KNARY ALK RK Q GG+QLQS TSKT KDS SQ+V +DE+L   ++KITV    K  +N
Sbjct: 529 KNARYMALKIRKLQEGGQQLQSITSKTSKDSTSQHVQEDEVLNPKSAKITVISSLKKCEN 588

Query: 603 VTGREKIKSCSSPLKKRRLQIPPPLRENGNKGSMEVNDDVSLKKLLKEKKTRVNFISEGD 662
           VTG+EK K+ S+PLKK+R +IPP L ENGNK SMEV+DDVSL KLL+++K +V+F  EGD
Sbjct: 589 VTGKEKTKASSNPLKKKRPEIPPCLGENGNKDSMEVSDDVSLMKLLQDRKKKVSFAFEGD 648

Query: 663 SQAAELEFERISKLKAKLDSMKQKLTEVQNLRASGSDKLCSNEPSVIYVPIAELREKV 720
           S+AAELEFER+SK+K K+D +KQ+LT VQN R+ GSD++  NEPS++YVPIAELREKV
Sbjct: 649 SEAAELEFERLSKVKTKIDRLKQRLTGVQNCRSKGSDEVHLNEPSIMYVPIAELREKV 706


>Medtr1g107015.3 | homeobox KN domain protein | HC |
           chr1:48447642-48453047 | 20130731
          Length = 851

 Score =  205 bits (521), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 91/167 (54%), Positives = 118/167 (70%)

Query: 158 YLLIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELQRAKKQILNCKLSIRDAIRQLDSLS 217
           Y L ++  EQNLIDAYSGEGWKG S EK++PEKE+QRAK +IL  KL IRD  + LDSL 
Sbjct: 256 YYLNRISYEQNLIDAYSGEGWKGSSMEKLKPEKEIQRAKSEILRRKLKIRDLFQNLDSLC 315

Query: 218 SLGSIEDSVIDPDGSVYHEHIFCANCKLREAFPDNDIILCDGTCNRAFHQRCLNPPLDTE 277
           + G + +S+ D +G +  E IFCA C+ +    +NDIILCDG C+R +HQ CL+PPL TE
Sbjct: 316 AEGRLPESLFDSEGEIDSEDIFCAKCQTKVLGTNNDIILCDGACDRGYHQLCLDPPLLTE 375

Query: 278 NIPPGDQGWFCNFCECKIEILEATNAHLGTQISLDSTWQDVFKEEAA 324
           +IPPGD+GW C  C+CK + +E  N  LGT +SL  +W+ VF E A 
Sbjct: 376 DIPPGDEGWLCPGCDCKDDCIELVNDLLGTSLSLTDSWERVFPEAAT 422



 Score = 58.9 bits (141), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 23/150 (15%)

Query: 415 GRRQRKSVDYKKLYDEMFGKDAPPCELVSEDEDWGTGKRKRREKESDAVNTLMTMHXXXX 474
           G+R  + +DY+KLY+E +  D       S+DEDW       R+K+  A  T  + +    
Sbjct: 583 GKRNVERLDYQKLYEETYHSD------TSDDEDWADTTTPSRKKKLTAKITPGSPNGNAS 636

Query: 475 XXXXXXXXDGIR---------------EG--SSGKPIRRSCFRIPHDALEKLRQVFAENE 517
                                      EG   SGK    S  ++    +++L + F EN+
Sbjct: 637 NNSRRTAKRNTHQHKVENTNNSPTKTLEGCTESGKKRGSSYCKLGEAVVQRLHKSFKENQ 696

Query: 518 LPPRSVKEGLSKELGIDAAKVSKWFKNARY 547
            P R+ KE L++ELG+   +V KWF N+R+
Sbjct: 697 YPERTAKESLAQELGLTFQQVDKWFGNSRW 726


>Medtr1g107015.4 | homeobox KN domain protein | HC |
           chr1:48447642-48453047 | 20130731
          Length = 851

 Score =  205 bits (521), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 91/167 (54%), Positives = 118/167 (70%)

Query: 158 YLLIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELQRAKKQILNCKLSIRDAIRQLDSLS 217
           Y L ++  EQNLIDAYSGEGWKG S EK++PEKE+QRAK +IL  KL IRD  + LDSL 
Sbjct: 256 YYLNRISYEQNLIDAYSGEGWKGSSMEKLKPEKEIQRAKSEILRRKLKIRDLFQNLDSLC 315

Query: 218 SLGSIEDSVIDPDGSVYHEHIFCANCKLREAFPDNDIILCDGTCNRAFHQRCLNPPLDTE 277
           + G + +S+ D +G +  E IFCA C+ +    +NDIILCDG C+R +HQ CL+PPL TE
Sbjct: 316 AEGRLPESLFDSEGEIDSEDIFCAKCQTKVLGTNNDIILCDGACDRGYHQLCLDPPLLTE 375

Query: 278 NIPPGDQGWFCNFCECKIEILEATNAHLGTQISLDSTWQDVFKEEAA 324
           +IPPGD+GW C  C+CK + +E  N  LGT +SL  +W+ VF E A 
Sbjct: 376 DIPPGDEGWLCPGCDCKDDCIELVNDLLGTSLSLTDSWERVFPEAAT 422



 Score = 58.9 bits (141), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 23/150 (15%)

Query: 415 GRRQRKSVDYKKLYDEMFGKDAPPCELVSEDEDWGTGKRKRREKESDAVNTLMTMHXXXX 474
           G+R  + +DY+KLY+E +  D       S+DEDW       R+K+  A  T  + +    
Sbjct: 583 GKRNVERLDYQKLYEETYHSD------TSDDEDWADTTTPSRKKKLTAKITPGSPNGNAS 636

Query: 475 XXXXXXXXDGIR---------------EG--SSGKPIRRSCFRIPHDALEKLRQVFAENE 517
                                      EG   SGK    S  ++    +++L + F EN+
Sbjct: 637 NNSRRTAKRNTHQHKVENTNNSPTKTLEGCTESGKKRGSSYCKLGEAVVQRLHKSFKENQ 696

Query: 518 LPPRSVKEGLSKELGIDAAKVSKWFKNARY 547
            P R+ KE L++ELG+   +V KWF N+R+
Sbjct: 697 YPERTAKESLAQELGLTFQQVDKWFGNSRW 726


>Medtr1g107015.2 | homeobox KN domain protein | HC |
           chr1:48447717-48453047 | 20130731
          Length = 826

 Score =  204 bits (520), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 91/167 (54%), Positives = 118/167 (70%)

Query: 158 YLLIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELQRAKKQILNCKLSIRDAIRQLDSLS 217
           Y L ++  EQNLIDAYSGEGWKG S EK++PEKE+QRAK +IL  KL IRD  + LDSL 
Sbjct: 231 YYLNRISYEQNLIDAYSGEGWKGSSMEKLKPEKEIQRAKSEILRRKLKIRDLFQNLDSLC 290

Query: 218 SLGSIEDSVIDPDGSVYHEHIFCANCKLREAFPDNDIILCDGTCNRAFHQRCLNPPLDTE 277
           + G + +S+ D +G +  E IFCA C+ +    +NDIILCDG C+R +HQ CL+PPL TE
Sbjct: 291 AEGRLPESLFDSEGEIDSEDIFCAKCQTKVLGTNNDIILCDGACDRGYHQLCLDPPLLTE 350

Query: 278 NIPPGDQGWFCNFCECKIEILEATNAHLGTQISLDSTWQDVFKEEAA 324
           +IPPGD+GW C  C+CK + +E  N  LGT +SL  +W+ VF E A 
Sbjct: 351 DIPPGDEGWLCPGCDCKDDCIELVNDLLGTSLSLTDSWERVFPEAAT 397



 Score = 58.9 bits (141), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 23/150 (15%)

Query: 415 GRRQRKSVDYKKLYDEMFGKDAPPCELVSEDEDWGTGKRKRREKESDAVNTLMTMHXXXX 474
           G+R  + +DY+KLY+E +  D       S+DEDW       R+K+  A  T  + +    
Sbjct: 558 GKRNVERLDYQKLYEETYHSD------TSDDEDWADTTTPSRKKKLTAKITPGSPNGNAS 611

Query: 475 XXXXXXXXDGIR---------------EG--SSGKPIRRSCFRIPHDALEKLRQVFAENE 517
                                      EG   SGK    S  ++    +++L + F EN+
Sbjct: 612 NNSRRTAKRNTHQHKVENTNNSPTKTLEGCTESGKKRGSSYCKLGEAVVQRLHKSFKENQ 671

Query: 518 LPPRSVKEGLSKELGIDAAKVSKWFKNARY 547
            P R+ KE L++ELG+   +V KWF N+R+
Sbjct: 672 YPERTAKESLAQELGLTFQQVDKWFGNSRW 701


>Medtr1g107015.1 | homeobox KN domain protein | HC |
           chr1:48446666-48453047 | 20130731
          Length = 926

 Score =  204 bits (519), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 91/167 (54%), Positives = 118/167 (70%)

Query: 158 YLLIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELQRAKKQILNCKLSIRDAIRQLDSLS 217
           Y L ++  EQNLIDAYSGEGWKG S EK++PEKE+QRAK +IL  KL IRD  + LDSL 
Sbjct: 331 YYLNRISYEQNLIDAYSGEGWKGSSMEKLKPEKEIQRAKSEILRRKLKIRDLFQNLDSLC 390

Query: 218 SLGSIEDSVIDPDGSVYHEHIFCANCKLREAFPDNDIILCDGTCNRAFHQRCLNPPLDTE 277
           + G + +S+ D +G +  E IFCA C+ +    +NDIILCDG C+R +HQ CL+PPL TE
Sbjct: 391 AEGRLPESLFDSEGEIDSEDIFCAKCQTKVLGTNNDIILCDGACDRGYHQLCLDPPLLTE 450

Query: 278 NIPPGDQGWFCNFCECKIEILEATNAHLGTQISLDSTWQDVFKEEAA 324
           +IPPGD+GW C  C+CK + +E  N  LGT +SL  +W+ VF E A 
Sbjct: 451 DIPPGDEGWLCPGCDCKDDCIELVNDLLGTSLSLTDSWERVFPEAAT 497



 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 23/150 (15%)

Query: 415 GRRQRKSVDYKKLYDEMFGKDAPPCELVSEDEDWGTGKRKRREKESDAVNTLMTMHXXXX 474
           G+R  + +DY+KLY+E +  D       S+DEDW       R+K+  A  T  + +    
Sbjct: 658 GKRNVERLDYQKLYEETYHSD------TSDDEDWADTTTPSRKKKLTAKITPGSPNGNAS 711

Query: 475 XXXXXXXXDGIR---------------EG--SSGKPIRRSCFRIPHDALEKLRQVFAENE 517
                                      EG   SGK    S  ++    +++L + F EN+
Sbjct: 712 NNSRRTAKRNTHQHKVENTNNSPTKTLEGCTESGKKRGSSYCKLGEAVVQRLHKSFKENQ 771

Query: 518 LPPRSVKEGLSKELGIDAAKVSKWFKNARY 547
            P R+ KE L++ELG+   +V KWF N+R+
Sbjct: 772 YPERTAKESLAQELGLTFQQVDKWFGNSRW 801


>Medtr3g088665.1 | PHD-finger protein | LC | chr3:40402136-40407486
           | 20130731
          Length = 800

 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 9/80 (11%)

Query: 234 YHEHIFCANCKLREAFPDND---IILCDGTCNRAFHQRCLNPPLDTENIPPGDQGWFCNF 290
           Y    +C +C  +    D D   I+LCDG C+ A+H  C+ PPLD+  IP G   WFC  
Sbjct: 675 YGYWWYCPSCICQVCLTDQDDSRIVLCDG-CDHAYHIYCMKPPLDS--IPQGK--WFCRK 729

Query: 291 CECKIE-ILEATNAHLGTQI 309
           C+  I+ I +A  A+   Q+
Sbjct: 730 CDAGIKAISQAKKAYESNQL 749