Miyakogusa Predicted Gene

Lj6g3v1315110.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1315110.1 tr|G7IIC1|G7IIC1_MEDTR Oligosaccharyltransferase
complex subunit OSTC OS=Medicago truncatula GN=MTR_,86.36,0,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; OST3_OST6,Oligosaccharyl
transferase complex, subun,CUFF.59333.1
         (177 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g038390.1 | oligosaccharyltransferase complex subunit OSTC...   186   1e-47

>Medtr2g038390.1 | oligosaccharyltransferase complex subunit
           OSTC-like protein | HC | chr2:16734700-16733766 |
           20130731
          Length = 175

 Score =  186 bits (471), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 105/176 (59%), Positives = 111/176 (63%), Gaps = 2/176 (1%)

Query: 1   MRPKSENPAQQXXXXXXXXXXXXXXIDPIFHXXXXXXXXXXXXXXXXXXXXXXXXXXANL 60
           M+ KSENP QQ              IDPIFH                          +NL
Sbjct: 1   MKSKSENPVQQTTTVTDPSSAAS--IDPIFHLLRILPFSFLRPPRLRLKLPSFSLPSSNL 58

Query: 61  VFAFVLLTYFMVVSGIVYDIIVEPPGIGSTQDPYTGAVKPVVFMSGRVNGQYIIEGLSSG 120
           VFA VLLTYFMVVSGIVYDIIVEPPGIGS QDPYTGAVKPVVFMSGRVNGQYIIEGLSSG
Sbjct: 59  VFALVLLTYFMVVSGIVYDIIVEPPGIGSMQDPYTGAVKPVVFMSGRVNGQYIIEGLSSG 118

Query: 121 FMFXXXXXXXXXXXXXXXXXXXXSVKVSYASAGITSVLLAYVMSMLFIRIKIPAYL 176
           FMF                    SVK SYA+AGITSV++AYVMSMLF+RIKIPAYL
Sbjct: 119 FMFVLGGIGIIMLDLALDRNRDRSVKASYATAGITSVVIAYVMSMLFVRIKIPAYL 174