Miyakogusa Predicted Gene

Lj6g3v1269750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1269750.1 CUFF.59302.1
         (179 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g059225.1 | LRR receptor-like kinase | HC | chr7:21438109-...   114   4e-26

>Medtr7g059225.1 | LRR receptor-like kinase | HC |
           chr7:21438109-21434883 | 20130731
          Length = 681

 Score =  114 bits (286), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 52/65 (80%), Positives = 56/65 (86%)

Query: 46  KIRASLQGNAENLVLSSWNSSIPLCQWRGLKWVFSNGSPLSCSDLSSPQWTNLSLHKNPS 105
           KI+ SLQG  ENLVLSSWN+SIPLCQWRGLKWVF+NGS LSC+DLSSPQW NLS  KNP 
Sbjct: 42  KIKPSLQGKTENLVLSSWNTSIPLCQWRGLKWVFTNGSSLSCTDLSSPQWNNLSFFKNPF 101

Query: 106 LHLLS 110
           LHL S
Sbjct: 102 LHLFS 106