Miyakogusa Predicted Gene
- Lj6g3v1259720.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1259720.1 tr|Q52ZH8|Q52ZH8_PEA FVE OS=Pisum sativum GN=FVE
PE=2 SV=1,88.47,0,WD40 repeat-like,WD40-repeat-containing domain; no
description,WD40/YVTN repeat-like-containing doma,CUFF.59301.1
(402 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g039250.1 | nucleosome/chromatin assembly factor group pro... 655 0.0
Medtr2g100090.1 | nucleosome/chromatin assembly factor group pro... 523 e-148
Medtr4g096880.1 | nucleosome/chromatin assembly factor group pro... 144 2e-34
Medtr4g073080.1 | nucleosome/chromatin assembly factor group pro... 125 8e-29
Medtr8g080700.1 | glutamate-rich WD repeat protein | HC | chr8:3... 88 1e-17
Medtr5g024090.1 | glutamate-rich WD repeat protein | HC | chr5:9... 75 1e-13
Medtr8g038550.1 | flowering time control FY-like protein | HC | ... 68 2e-11
Medtr3g106080.1 | TBP-associated factor 5 | HC | chr3:48932864-4... 64 4e-10
Medtr6g004040.1 | katanin p80 WD40 repeat subunit B1-like protei... 62 1e-09
Medtr1g072140.1 | transducin/WD40 repeat protein | HC | chr1:320... 56 6e-08
Medtr4g119620.1 | transducin/WD40 repeat protein | HC | chr4:495... 56 7e-08
Medtr2g016160.2 | peroxisomal targeting signal type 2 receptor |... 55 2e-07
Medtr2g016160.1 | peroxisomal targeting signal type 2 receptor |... 55 2e-07
Medtr2g034500.1 | WD40/YVTN repeat containing domain; bromodomai... 52 1e-06
Medtr5g085250.3 | E3 ubiquitin-protein ligase COP1 | HC | chr5:3... 51 2e-06
Medtr5g085250.2 | E3 ubiquitin-protein ligase COP1 | HC | chr5:3... 51 2e-06
Medtr5g085250.1 | E3 ubiquitin-protein ligase COP1 | HC | chr5:3... 51 3e-06
Medtr3g116500.2 | guanine nucleotide-binding protein beta subuni... 50 3e-06
Medtr3g116500.1 | guanine nucleotide-binding protein beta subuni... 50 3e-06
Medtr3g116500.3 | guanine nucleotide-binding protein beta subuni... 50 3e-06
Medtr3g116500.5 | guanine nucleotide-binding protein beta subuni... 49 6e-06
Medtr3g116500.4 | guanine nucleotide-binding protein beta subuni... 49 6e-06
>Medtr2g039250.1 | nucleosome/chromatin assembly factor group
protein | HC | chr2:17196765-17189459 | 20130731
Length = 500
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/393 (83%), Positives = 342/393 (87%), Gaps = 13/393 (3%)
Query: 5 TPPSQQGVVKKKETRGRXXXXXXXXXXE--HQKTPKETKKAXXXXXXXXXXXXXXXSSVD 62
TPPS G VKKKETRGR E K+P+E+KK +SVD
Sbjct: 3 TPPST-GAVKKKETRGRKPKPKEDKREEPSQVKSPRESKK--EKQQQQLHQQQQQQASVD 59
Query: 63 EKYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTL 122
EKY+QWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTL
Sbjct: 60 EKYSQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTL 119
Query: 123 VIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQSSRIVATHTD 182
VIANCEVVK RVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQ+S+IVATHTD
Sbjct: 120 VIANCEVVKTRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTD 179
Query: 183 SPDVLIWDVESQPNRHAVLGATNSRPDLILTGHIDNAEFALAMCPTEPYVLSGGKDKTVV 242
SPDVLIWDVESQPNRHAVLGATNSRPDLILTGH DNAEFALAMCPT+PYVLSGGKDKTVV
Sbjct: 180 SPDVLIWDVESQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTQPYVLSGGKDKTVV 239
Query: 243 LWSIEDHVTSAS--DSKSAGSIIKGEGYDKTADGPSVGPRGIYRGHEDTVEDVTFCPSSA 300
LWSIEDH+TSA+ +KS GSI KTAD P+VGPRGIY GHEDTVEDV FCPSSA
Sbjct: 240 LWSIEDHITSAATDSNKSGGSIA------KTADSPTVGPRGIYSGHEDTVEDVAFCPSSA 293
Query: 301 QEFCSVGDDSCLILWDARVGCSPVVKVEKAHDADLHCVDWNPHDDNLILTGSADNSVRMF 360
QEFCSVGDDSCLILWDARVG SPVVKVEKAHDADLHCVDWNPHDDNLILTGSADNS+RMF
Sbjct: 294 QEFCSVGDDSCLILWDARVGSSPVVKVEKAHDADLHCVDWNPHDDNLILTGSADNSIRMF 353
Query: 361 DRRNLTSNGVGAPIHKFEGHKAAVLCVQWSPDK 393
DRRNLTSNGVG+PIHKFE HKAAVLCVQWSPDK
Sbjct: 354 DRRNLTSNGVGSPIHKFEAHKAAVLCVQWSPDK 386
>Medtr2g100090.1 | nucleosome/chromatin assembly factor group
protein | HC | chr2:42972259-42978885 | 20130731
Length = 479
Score = 523 bits (1346), Expect = e-148, Method: Compositional matrix adjust.
Identities = 250/340 (73%), Positives = 285/340 (83%), Gaps = 7/340 (2%)
Query: 60 SVDEKYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVP 119
S++E+Y+QWKSLVPVLYDWLANHNLVWPS SCRWG L+ ATYKNR RLYLSEQTDG+ P
Sbjct: 16 SIEERYSQWKSLVPVLYDWLANHNLVWPSQSCRWGSLLDHATYKNRHRLYLSEQTDGTAP 75
Query: 120 NTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQSSRIVAT 179
NTLVIA CE+VKPRVAAAEHI+ FNEEARSPFVKK KTI+HPGEVNRIRELP ++ IVAT
Sbjct: 76 NTLVIATCEIVKPRVAAAEHIAMFNEEARSPFVKKVKTILHPGEVNRIRELPSNTNIVAT 135
Query: 180 HTDSPDVLIWDVESQPNR-HAVLGATNSRPDLILTGHIDNAEFALAMCPTEPYVLSGGKD 238
HTDSP+V+IW+VESQPNR +A L A S PDL+LTGH DNAEFALAMC TEP+VLSGG+D
Sbjct: 136 HTDSPNVMIWNVESQPNRNNAALDAPTSIPDLVLTGHKDNAEFALAMCSTEPFVLSGGRD 195
Query: 239 KTVVLWSIEDHVTSASDSK----SAGSIIKGEGYDKTADGPSVGPRGIYRGHEDTVEDVT 294
K VVLWSI DH+ + + + + GS + G +K A PSVG RG+YRGH+DTVEDV
Sbjct: 196 KLVVLWSIHDHIATLATEEEPDVNEGSNVGGNS-EKAAQSPSVGARGVYRGHKDTVEDVQ 254
Query: 295 FCPSSAQEFCSVGDDSCLILWDARVGCSPVVKVEKAHDADLHCVDWNPHDDNLILTGSAD 354
FCPSSAQEFCSVGDDSCLILWDARVG P VKVEKAHD D+HCVDWN HD N ILTGSAD
Sbjct: 255 FCPSSAQEFCSVGDDSCLILWDARVGSFPAVKVEKAHDGDVHCVDWNTHDINFILTGSAD 314
Query: 355 NSVRMFDRRNLTS-NGVGAPIHKFEGHKAAVLCVQWSPDK 393
N+VRMFDRR L + G+G+P++KFEGH VLCVQW+P K
Sbjct: 315 NTVRMFDRRKLNNRGGIGSPVYKFEGHDEPVLCVQWNPAK 354
>Medtr4g096880.1 | nucleosome/chromatin assembly factor group
protein | HC | chr4:38572918-38568681 | 20130731
Length = 423
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 163/337 (48%), Gaps = 40/337 (11%)
Query: 65 YTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR--QRLYLSEQTDGSVPNTL 122
Y WK P LYD + H L WPSL+ W P + + K+ Q+L L T + PN L
Sbjct: 21 YKIWKKNSPFLYDLVITHALEWPSLTVEWLPDRTEPSGKDYSVQKLILGTHTSENEPNYL 80
Query: 123 VIANCEV-VKPRVAAAEHISQFNEEA-----RSPFVKKYKTIIHPGEVNRIRELPQSSRI 176
++A ++ + A H E + V+ + I H GEVNR R +PQ+S +
Sbjct: 81 MLAQVQLPLDDSENDARHYDDDRPEVGGFGCANGKVQIIQQINHDGEVNRARYMPQNSFV 140
Query: 177 VATHTDSPDVLIWDVESQPNRHAVLGATNSRPDLILTGHIDNAEFALAMCP-TEPYVLSG 235
+AT T S +V ++D P++ + G+ N PDL L GH + + L+ + ++LSG
Sbjct: 141 IATKTVSAEVYVFDYSKHPSKPPIDGSCN--PDLRLRGH-NTEGYGLSWSKFKQGHLLSG 197
Query: 236 GKDKTVVLWSIEDHVTSASDSKSAGSIIKGEGYDKTADGPSVGPRGIYRGHEDTVEDVTF 295
D + LW I + T S+ I++ HE VEDV +
Sbjct: 198 SDDAQICLWDI----------------------NGTPKNKSLDAHQIFKVHEGVVEDVAW 235
Query: 296 CPSSAQEFCSVGDDSCLILWDARV-GCSPVVKVEKAHDADLHCVDWNPHDDNLILTGSAD 354
F SVGDD L++WD R + V+ AH ++++C+ +NP ++ ++ TGS D
Sbjct: 236 HLRHEYLFGSVGDDQYLLVWDLRTPSVTKPVQSCIAHSSEVNCLAFNPFNEWIVATGSTD 295
Query: 355 NSVRMFDRRNLTSNGVGAPIHKFEGHKAAVLCVQWSP 391
+V+++D R +G +H F+ HK V V W+P
Sbjct: 296 KTVKLWDLRK-----IGNVLHTFDCHKEEVFQVGWNP 327
>Medtr4g073080.1 | nucleosome/chromatin assembly factor group
protein | HC | chr4:27640107-27642823 | 20130731
Length = 405
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 151/332 (45%), Gaps = 43/332 (12%)
Query: 65 YTQWKSLVPVLYDWLANHNLVWPSLSCRW---GPQLEQATYKNRQRLYLSEQTDGSVPNT 121
++ WK P+LYD +H L WPSL+ +W PQ + N +L L+ T PN
Sbjct: 17 FSVWKRNTPLLYDLFISHPLAWPSLTVQWLPSPPQPHSNSSFNLHKLLLATHTSDEEPNY 76
Query: 122 LVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQSSRIVATHT 181
L++A E P + I+ E P V+ + I+ GEVNR R +PQ++ +VA T
Sbjct: 77 LMLA--ESTLPGNPSQPIIATDPENPILPKVEITQRILVDGEVNRARAMPQNANVVAAKT 134
Query: 182 DSPDVLIWDVESQPNRHAVLGATNSRPDLILTGHIDNAEFALAMCPTE-PYVLSGGKDKT 240
+ V ++D + PD L GH + + L+ + Y+LSG D
Sbjct: 135 CNSVVYVFDFTKK-------RGEGCNPDFRLKGH-EKEGYGLSWSGFKNGYLLSGSNDHK 186
Query: 241 VVLWSIEDHVTSASDSKSAGSIIKGEGYDKTADGPSVGPRGIYRGHEDTVEDVTFCPSSA 300
+ LW V AS+S ++ +Y GHE VEDV++ +
Sbjct: 187 ICLWD----VFGASESNVLDAV------------------HVYEGHESVVEDVSWHFHNE 224
Query: 301 QEFCSVGDDSCLILWDARVGCSPVVKVEKAHDADLHCVDWNPHDDNLILTGSADNSVRMF 360
F S GDD LI+WD R + K H+ +++ V ++P+ + ++ T S+D + +F
Sbjct: 225 NLFGSGGDDCKLIIWDLRT--NKAQHSLKPHEREVNFVSFSPYSEWILATASSDTDIGLF 282
Query: 361 DRRNLTSNGVGAPIHKFEGHKAAVLCVQWSPD 392
D R L P+H H V V+W P+
Sbjct: 283 DLRKLE-----VPLHFLSSHTDEVFQVEWDPN 309
>Medtr8g080700.1 | glutamate-rich WD repeat protein | HC |
chr8:34739832-34734055 | 20130731
Length = 469
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 114/251 (45%), Gaps = 35/251 (13%)
Query: 154 KYKTIIHPGEVNRIRELPQSSRIVATHTDSPDVLIWDVESQPNRHA------VLGATNSR 207
+ + + H G +NRIR + Q+ I A+ +S V IWD+ S N A V G +
Sbjct: 155 QLRKVTHEGCINRIRSMAQNPHICASWAESGHVQIWDMSSHLNALAETETDGVQGVDAVQ 214
Query: 208 PDLILTGHIDNAEFALAMCPTEP-YVLSGGKDKTVVLWSIEDHVTSASDSKSAGSIIKGE 266
L H D +A+ P P ++SG + ++ LW + SA +
Sbjct: 215 APLQKFKHKDEG-YAIDWSPLVPGRLVSGDCNNSIYLW----------EPTSAATW---- 259
Query: 267 GYDKTADGPSVGPRGIYRGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGCSPVVK 326
+KT + GH D+VED+ + P+ F S D + +WD R+G SP
Sbjct: 260 NIEKTP----------FTGHTDSVEDLQWSPTEPHVFASCSVDKSIAIWDTRLGRSPAAS 309
Query: 327 VEKAHDADLHCVDWNPHDDNLILTGSADNSVRMFDRRNLTSNGVGAPIHKFEGHKAAVLC 386
+ AH AD++ + WN ++ +GS D ++ + D R L G H FE HK +
Sbjct: 310 FQ-AHKADVNVLSWNRLASCMLASGSDDGTISIRDLR-LLKEGDSVVAH-FEYHKHPITS 366
Query: 387 VQWSPDKRWSL 397
++WSP + SL
Sbjct: 367 IEWSPHEASSL 377
>Medtr5g024090.1 | glutamate-rich WD repeat protein | HC |
chr5:9647473-9652782 | 20130731
Length = 455
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 103/248 (41%), Gaps = 38/248 (15%)
Query: 154 KYKTIIHPGEVNRIRELPQSSRIVATHTDSPDVLIWDVES------QPNRHAVLGATNSR 207
+ + + H G +NRIR +P I A+ D V IWD+ S + V G ++
Sbjct: 149 QLRKVTHEGCINRIRSMPHKPHICASWGDCGHVQIWDMSSHLKALAETETEGVQGDDVAQ 208
Query: 208 PDLILTGHIDNAEFALAMCPTEPYVLSGGKDKTVVLWSIEDHVTSASDSKSAGSIIKGEG 267
L H D +A+ P +LSG + + LW T D
Sbjct: 209 VPLQKFKHKDEG-YAIDWNP-HACLLSGDCNNNIYLWEPTSAATWNIDQTP--------- 257
Query: 268 YDKTADGPSVGPRGIYRGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGCSPVVKV 327
+ GH +VED+ + P F S D + +WD R SP +
Sbjct: 258 ---------------FTGHTGSVEDLQWSP-KPDVFASCSVDKSIAIWDTRCRRSPRLTF 301
Query: 328 EKAHDADLHCVDWN---PHDDNLILTGSADNSVRMFDRRNLTSNGVGAPIHKFEGHKAAV 384
AH+AD++ + WN + NL+ +GS D S+ + D R+L G + FE HK +
Sbjct: 302 -IAHNADVNVISWNRSAGYTSNLLASGSDDGSISVHDLRSL-QEGKDPVVAHFEYHKHPI 359
Query: 385 LCVQWSPD 392
++W+PD
Sbjct: 360 TSIEWNPD 367
>Medtr8g038550.1 | flowering time control FY-like protein | HC |
chr8:14279771-14293184 | 20130731
Length = 745
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 65/113 (57%), Gaps = 12/113 (10%)
Query: 286 HEDTVEDVTFCPSSAQEFCSVGDDSCLILWD-ARVGCSPVVKVEKAHDADLHCVDWNPHD 344
H+++V D++FC + +FCS DD+ + +WD AR C + H D+ VDW+P
Sbjct: 266 HKESVRDLSFC-RTDLKFCSCSDDTTVKVWDFAR--CQEECSL-TGHGWDVKSVDWHP-T 320
Query: 345 DNLILTGSADNSVRMFDRRNLTSNGVGAPIHKFEGHKAAVLCVQWSPDKRWSL 397
+L+++G DN V+++D ++ G + F GHK VLCV+W+ + W L
Sbjct: 321 KSLLVSGGKDNLVKLWDAKS------GKELSSFHGHKNTVLCVKWNQNGNWVL 367
>Medtr3g106080.1 | TBP-associated factor 5 | HC |
chr3:48932864-48942802 | 20130731
Length = 669
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 40/197 (20%)
Query: 200 VLGATNSRPDLILTGHIDNAEFALAMCPTEPYVLSGGKDKTVVLWSIEDHVTSASDSKSA 259
+LG + + L +A + CP ++LS D T+ LWS +K
Sbjct: 402 MLGKSGGKRQYTLFQGHSGPVYAASFCPVGDFILSSSADSTIRLWS----------TKLN 451
Query: 260 GSIIKGEGYDKTADGPSVGPRGIYRGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDA-R 318
+++ Y+GH V DV F P F S D +W R
Sbjct: 452 ANLV------------------CYKGHNYPVWDVQFSPM-GHYFASSSHDRTARVWSMDR 492
Query: 319 VGCSPVVKVEKAHDADLHCVDWNPHDDNLILTGSADNSVRMFDRRNLTSNGVGAPIHKFE 378
+ +++ H +D+ CV W+ + N I TGS+D +VR++D ++ G + F
Sbjct: 493 I---QPLRIMAGHLSDVDCVQWHA-NCNYIATGSSDKTVRLWDVQS------GECVRVFV 542
Query: 379 GHKAAVLCVQWSPDKRW 395
GH+ +L + SPD R+
Sbjct: 543 GHRGMILSLSMSPDGRY 559
>Medtr6g004040.1 | katanin p80 WD40 repeat subunit B1-like protein |
HC | chr6:91770-77124 | 20130731
Length = 760
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 111/262 (42%), Gaps = 43/262 (16%)
Query: 153 KKYKTIIHPGEVNRIRELPQSSRIVATHTDSPDVLIWDVESQPNRHAVLGATNSRPDLIL 212
K + + H VN ++ +SSR++ T + V +W + +PN A+L L
Sbjct: 8 KLQEFVAHASAVNCLKIGRKSSRVLVTGGEDHKVNLWAI-GKPN--AILS---------L 55
Query: 213 TGH---IDNAEFALAMCPTEPYVLSGGKDKTVVLWSIED---------HVTSAS--DSKS 258
+GH ID+ F +E V +G T+ LW +E+ H ++ + D
Sbjct: 56 SGHSSGIDSVNFD----SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCTSVDFHP 111
Query: 259 AGSIIKGEGYDKTADGPSVGPRG---IYRGHEDTVEDVTFCPSSAQEFCSVGDDSCLILW 315
G D + +G Y+GH V + F P + S G+D+ + LW
Sbjct: 112 FGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD-GRWVVSGGEDNTVKLW 170
Query: 316 DARVGCSPVVKVEKAHDADLHCVDWNPHDDNLILTGSADNSVRMFDRRNLTSNGVGAPIH 375
D G ++ K+H+ + C+D++P + L+ TGSAD +V+ +D G P
Sbjct: 171 DLTAG--KLLHDFKSHEGQIQCIDFHP-SEFLLATGSADRTVKFWDLETFELIGSAGP-- 225
Query: 376 KFEGHKAAVLCVQWSPDKRWSL 397
V + +SPD R L
Sbjct: 226 ----ETTGVRSLTFSPDGRTLL 243
>Medtr1g072140.1 | transducin/WD40 repeat protein | HC |
chr1:32005480-32003360 | 20130731
Length = 316
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 285 GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGCSPVVKVEKAHDADLHCVDWNPHD 344
GH + + D+ + S + CS DD L +WDA G VK + H ++ CV++NP
Sbjct: 67 GHSEGINDIAW-SSDSHYICSASDDKTLRIWDANTG--DCVKTLRGHGHNVFCVNFNPQ- 122
Query: 345 DNLILTGSADNSVRMFDRRNLTSNGVGAPIHKFEGHKAAVLCVQWSPD 392
N I++GS D +VR+++ + G +H + H V V ++ D
Sbjct: 123 SNYIVSGSFDETVRVWEVK------TGKSVHVIKAHAMPVTSVDFNRD 164
>Medtr4g119620.1 | transducin/WD40 repeat protein | HC |
chr4:49575751-49578750 | 20130731
Length = 326
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 7/112 (6%)
Query: 256 SKSAGSIIKGEGY---DKTADGPSVGPRGIYRGHEDTVEDVTFCPSSAQEFCSVGDDSCL 312
S SA ++ G+ D ++ ++ P Y GH+ V D+ F S ++ S DD +
Sbjct: 44 SSSADKTLRTYGFTNSDSDSNSLTLSPMQQYEGHQHGVSDLAF-SSDSRYLVSASDDKTI 102
Query: 313 ILWDARVGCSPVVKVEKAHDADLHCVDWNPHDDNLILTGSADNSVRMFDRRN 364
LWD G +VK H + CV++NP N+I++GS D +VR++D ++
Sbjct: 103 RLWDVPTG--SLVKTLHGHTNYVFCVNFNPQS-NVIVSGSFDETVRVWDVKS 151
>Medtr2g016160.2 | peroxisomal targeting signal type 2 receptor | HC
| chr2:4893425-4894823 | 20130731
Length = 318
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 283 YRGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGCSPVVKVEKAHDADLHCVDWNP 342
++ H V + P A F S D + +WD R S ++ AH+ ++ DWN
Sbjct: 146 FKEHAYCVYSSVWNPRHADVFASASGDCTVRIWDVREPGSTMIL--PAHEHEILSCDWNK 203
Query: 343 HDDNLILTGSADNSVRMFDRRNLTSNGVGAPIHKFEGHKAAVLCVQWSPDKR 394
+D+ +I TGS D SV+++D R+ P+ GH AV V++SP R
Sbjct: 204 YDECIIATGSVDKSVKVWDVRSYR-----VPVAVLNGHGYAVRKVKFSPHVR 250
>Medtr2g016160.1 | peroxisomal targeting signal type 2 receptor | HC
| chr2:4893425-4894823 | 20130731
Length = 318
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 283 YRGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGCSPVVKVEKAHDADLHCVDWNP 342
++ H V + P A F S D + +WD R S ++ AH+ ++ DWN
Sbjct: 146 FKEHAYCVYSSVWNPRHADVFASASGDCTVRIWDVREPGSTMIL--PAHEHEILSCDWNK 203
Query: 343 HDDNLILTGSADNSVRMFDRRNLTSNGVGAPIHKFEGHKAAVLCVQWSPDKR 394
+D+ +I TGS D SV+++D R+ P+ GH AV V++SP R
Sbjct: 204 YDECIIATGSVDKSVKVWDVRSYR-----VPVAVLNGHGYAVRKVKFSPHVR 250
>Medtr2g034500.1 | WD40/YVTN repeat containing domain; bromodomain
protein | HC | chr2:13169883-13184309 | 20130731
Length = 1726
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 38/215 (17%)
Query: 212 LTGHIDNAEFALAMCPTEPYVLSGGKDKTVVLWSIE---------DHVTSASD--SKSAG 260
+ GH NA + + YV++G D+ V +WS+E HV +D S
Sbjct: 237 IRGHC-NAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNN 295
Query: 261 SIIKGEGYD---KTADGPSVGPRGIYRGHEDTVEDVTFC--PSSAQEFCSVGDDSCLILW 315
+++ D + P P + RGH V + F P++ + S DD +W
Sbjct: 296 ALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIW 355
Query: 316 DARVGCS-PVVKVEKAHDA----------------DLHCVDWNPHDDNLILTGSADNSVR 358
DAR S P + V K D+ + C +N + + +TGS+DN R
Sbjct: 356 DARYTHSTPRLYVPKPSDSTGRSSGPSSNTMPQSHQIFCCAFNA-NGTVFVTGSSDNLAR 414
Query: 359 MFDRRNLTSNGVGAPIHKFE---GHKAAVLCVQWS 390
+++ L+ V P H+ + GH+ V VQ+S
Sbjct: 415 VWNACKLSMEDVEQPNHEIDVLSGHENDVNYVQFS 449
>Medtr5g085250.3 | E3 ubiquitin-protein ligase COP1 | HC |
chr5:36796040-36807238 | 20130731
Length = 540
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 283 YRGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGCSPVVKVEKAHDADLHCVDWNP 342
Y HE V F + S DD + +W S V+ ++ A++ CV +NP
Sbjct: 324 YEEHEKRAWSVDFSRTDPSMLVSGSDDCKVKVWCTNQEAS-VLNIDMK--ANICCVKYNP 380
Query: 343 HDDNLILTGSADNSVRMFDRRNLTSNGVGAPIHKFEGHKAAVLCVQW 389
N I GSAD+ + +D RN++ P+H F GHK AV V++
Sbjct: 381 GSGNYIAVGSADHHIHYYDLRNISR-----PVHVFSGHKKAVSYVKF 422
>Medtr5g085250.2 | E3 ubiquitin-protein ligase COP1 | HC |
chr5:36796040-36807238 | 20130731
Length = 573
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 283 YRGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGCSPVVKVEKAHDADLHCVDWNP 342
Y HE V F + S DD + +W S V+ ++ A++ CV +NP
Sbjct: 357 YEEHEKRAWSVDFSRTDPSMLVSGSDDCKVKVWCTNQEAS-VLNIDMK--ANICCVKYNP 413
Query: 343 HDDNLILTGSADNSVRMFDRRNLTSNGVGAPIHKFEGHKAAVLCVQW 389
N I GSAD+ + +D RN++ P+H F GHK AV V++
Sbjct: 414 GSGNYIAVGSADHHIHYYDLRNISR-----PVHVFSGHKKAVSYVKF 455
>Medtr5g085250.1 | E3 ubiquitin-protein ligase COP1 | HC |
chr5:36796022-36807260 | 20130731
Length = 677
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 283 YRGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGCSPVVKVEKAHDADLHCVDWNP 342
Y HE V F + S DD + +W S V+ ++ A++ CV +NP
Sbjct: 461 YEEHEKRAWSVDFSRTDPSMLVSGSDDCKVKVWCTNQEAS-VLNIDMK--ANICCVKYNP 517
Query: 343 HDDNLILTGSADNSVRMFDRRNLTSNGVGAPIHKFEGHKAAVLCVQW 389
N I GSAD+ + +D RN++ P+H F GHK AV V++
Sbjct: 518 GSGNYIAVGSADHHIHYYDLRNISR-----PVHVFSGHKKAVSYVKF 559
>Medtr3g116500.2 | guanine nucleotide-binding protein beta
subunit-like protein | HC | chr3:54501019-54496204 |
20130731
Length = 378
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 75/184 (40%), Gaps = 25/184 (13%)
Query: 211 ILTGHIDNAEFALAMCPTEPYVLSGGKDKTVVLWSIEDHVTSASDSKSAGSIIKGEGYDK 270
+L+GH + + ++++G D+T VLW I + + S+ GE
Sbjct: 151 MLSGHKGYVSSCQYVPGEDTHLITGSGDQTCVLWDITTGLRT--------SVFGGE---- 198
Query: 271 TADGPSVGPRGIYRGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGCSPVVKVEKA 330
GH V ++ S+++ F S D+ LWD RV S V+
Sbjct: 199 -----------FQSGHTADVLSISINGSNSKMFVSGSCDATARLWDTRVA-SRAVRTFHG 246
Query: 331 HDADLHCVDWNPHDDNLILTGSADNSVRMFDRRNLTSNGVGAPIHKFEGHKAAVLCVQWS 390
H+ D++ V + P D N TGS D + R+FD R V H + A V + +S
Sbjct: 247 HEGDVNSVKFFP-DGNRFGTGSEDGTCRLFDIRTGHQLQVYNQQHSGDNEMAHVTSIAFS 305
Query: 391 PDKR 394
R
Sbjct: 306 ISGR 309
>Medtr3g116500.1 | guanine nucleotide-binding protein beta
subunit-like protein | HC | chr3:54501139-54496286 |
20130731
Length = 378
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 75/184 (40%), Gaps = 25/184 (13%)
Query: 211 ILTGHIDNAEFALAMCPTEPYVLSGGKDKTVVLWSIEDHVTSASDSKSAGSIIKGEGYDK 270
+L+GH + + ++++G D+T VLW I + + S+ GE
Sbjct: 151 MLSGHKGYVSSCQYVPGEDTHLITGSGDQTCVLWDITTGLRT--------SVFGGE---- 198
Query: 271 TADGPSVGPRGIYRGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGCSPVVKVEKA 330
GH V ++ S+++ F S D+ LWD RV S V+
Sbjct: 199 -----------FQSGHTADVLSISINGSNSKMFVSGSCDATARLWDTRVA-SRAVRTFHG 246
Query: 331 HDADLHCVDWNPHDDNLILTGSADNSVRMFDRRNLTSNGVGAPIHKFEGHKAAVLCVQWS 390
H+ D++ V + P D N TGS D + R+FD R V H + A V + +S
Sbjct: 247 HEGDVNSVKFFP-DGNRFGTGSEDGTCRLFDIRTGHQLQVYNQQHSGDNEMAHVTSIAFS 305
Query: 391 PDKR 394
R
Sbjct: 306 ISGR 309
>Medtr3g116500.3 | guanine nucleotide-binding protein beta
subunit-like protein | HC | chr3:54501139-54496286 |
20130731
Length = 378
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 75/184 (40%), Gaps = 25/184 (13%)
Query: 211 ILTGHIDNAEFALAMCPTEPYVLSGGKDKTVVLWSIEDHVTSASDSKSAGSIIKGEGYDK 270
+L+GH + + ++++G D+T VLW I + + S+ GE
Sbjct: 151 MLSGHKGYVSSCQYVPGEDTHLITGSGDQTCVLWDITTGLRT--------SVFGGE---- 198
Query: 271 TADGPSVGPRGIYRGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGCSPVVKVEKA 330
GH V ++ S+++ F S D+ LWD RV S V+
Sbjct: 199 -----------FQSGHTADVLSISINGSNSKMFVSGSCDATARLWDTRVA-SRAVRTFHG 246
Query: 331 HDADLHCVDWNPHDDNLILTGSADNSVRMFDRRNLTSNGVGAPIHKFEGHKAAVLCVQWS 390
H+ D++ V + P D N TGS D + R+FD R V H + A V + +S
Sbjct: 247 HEGDVNSVKFFP-DGNRFGTGSEDGTCRLFDIRTGHQLQVYNQQHSGDNEMAHVTSIAFS 305
Query: 391 PDKR 394
R
Sbjct: 306 ISGR 309
>Medtr3g116500.5 | guanine nucleotide-binding protein beta
subunit-like protein | HC | chr3:54501139-54496286 |
20130731
Length = 268
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 25/153 (16%)
Query: 211 ILTGHIDNAEFALAMCPTEPYVLSGGKDKTVVLWSIEDHVTSASDSKSAGSIIKGEGYDK 270
+L+GH + + ++++G D+T VLW I + + S+ GE
Sbjct: 41 MLSGHKGYVSSCQYVPGEDTHLITGSGDQTCVLWDITTGLRT--------SVFGGE---- 88
Query: 271 TADGPSVGPRGIYRGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGCSPVVKVEKA 330
GH V ++ S+++ F S D+ LWD RV S V+
Sbjct: 89 -----------FQSGHTADVLSISINGSNSKMFVSGSCDATARLWDTRVA-SRAVRTFHG 136
Query: 331 HDADLHCVDWNPHDDNLILTGSADNSVRMFDRR 363
H+ D++ V + P D N TGS D + R+FD R
Sbjct: 137 HEGDVNSVKFFP-DGNRFGTGSEDGTCRLFDIR 168
>Medtr3g116500.4 | guanine nucleotide-binding protein beta
subunit-like protein | HC | chr3:54501139-54496286 |
20130731
Length = 268
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 25/153 (16%)
Query: 211 ILTGHIDNAEFALAMCPTEPYVLSGGKDKTVVLWSIEDHVTSASDSKSAGSIIKGEGYDK 270
+L+GH + + ++++G D+T VLW I + + S+ GE
Sbjct: 41 MLSGHKGYVSSCQYVPGEDTHLITGSGDQTCVLWDITTGLRT--------SVFGGE---- 88
Query: 271 TADGPSVGPRGIYRGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARVGCSPVVKVEKA 330
GH V ++ S+++ F S D+ LWD RV S V+
Sbjct: 89 -----------FQSGHTADVLSISINGSNSKMFVSGSCDATARLWDTRVA-SRAVRTFHG 136
Query: 331 HDADLHCVDWNPHDDNLILTGSADNSVRMFDRR 363
H+ D++ V + P D N TGS D + R+FD R
Sbjct: 137 HEGDVNSVKFFP-DGNRFGTGSEDGTCRLFDIR 168