Miyakogusa Predicted Gene

Lj6g3v1249680.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1249680.1 Non Characterized Hit- tr|B9RK72|B9RK72_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,34.58,7e-19,DUF761,Protein of unknown function DUF761, plant;
DUF4408,Domain of unknown function DUF4408,CUFF.59298.1
         (228 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g039320.1 | DUF4408 domain protein | HC | chr2:17235644-17...   154   5e-38
Medtr4g126210.1 | DUF4408 domain protein | HC | chr4:52484474-52...   102   2e-22
Medtr1g016100.1 | plant/MHM17-10 protein, putative | HC | chr1:4...    58   8e-09
Medtr4g126170.1 | DUF4408 domain protein | HC | chr4:52465031-52...    49   3e-06

>Medtr2g039320.1 | DUF4408 domain protein | HC |
           chr2:17235644-17236881 | 20130731
          Length = 222

 Score =  154 bits (390), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/235 (45%), Positives = 138/235 (58%), Gaps = 38/235 (16%)

Query: 13  TSVYATMIASWLTPSCLFILLNLVIGTIAITSRSACQKRRQLDS---CGAPSPSLLDRVT 69
            S+Y  +I SWL+PS +F+++NLVIGTIAITS  A QK+RQ +S       S S+  RVT
Sbjct: 7   VSIY-DIIVSWLSPSFIFLIVNLVIGTIAITSHFATQKKRQPNSPLELVRSSSSIFGRVT 65

Query: 70  SFGLGCCKIKPAATVSESQRSV----VDPVQNSDSPRLNRVPSSCEIANPAAPDRDPNEL 125
           SFGL CCK +PA+  S +  +     V+ VQN D  +LNR  SS  +    + D     L
Sbjct: 66  SFGLSCCKFEPASAASTTTTTPEETQVEQVQNQDLTQLNRTISSTLLDRVKSID-----L 120

Query: 126 GQNQLPCDGLDQVPSCETESPAAPDWNQLPRAPSFLERIVSLNFRRSDSVK--------- 176
           G ++    G               +   L RAPS LER++S NFRR DSVK         
Sbjct: 121 GLSKTEMKG------------GLGNSTPLIRAPSLLERLMSGNFRRLDSVKVVEEEKKAE 168

Query: 177 SEKGSGPD---VTGLMEEEKGVDARADDFIKSFKQQLRMQRLDSILRYRNMLRRN 228
           SE    P+   V G +EEE+ VDA+ADDFIK FKQQLR++RLDSILRYR++L RN
Sbjct: 169 SEVELKPEREIVRGRVEEEE-VDAKADDFIKRFKQQLRLERLDSILRYRDILHRN 222


>Medtr4g126210.1 | DUF4408 domain protein | HC |
           chr4:52484474-52482692 | 20130731
          Length = 246

 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 115/255 (45%), Gaps = 58/255 (22%)

Query: 17  ATMIASWLTPSCLFILLNLVIGTIAITSRSACQKRRQLDSCGAP----SPSLLDRVTSFG 72
            T IA+W TPS +FI++NLVIGTIA+ SR     +   D    P    SPSLL+R+ SF 
Sbjct: 5   TTFIATWFTPSSIFIIVNLVIGTIALASRFNGPPKN--DQIQQPQLNRSPSLLNRIRSFN 62

Query: 73  LGCCKIKPAATVSESQRSVVDPVQNSDSPRLNRVPSSCE-IANPAAPDRDPNELGQNQLP 131
           L     +P+           +       P+L R PS  E + +      +P      Q P
Sbjct: 63  LRHYNQEPSFVAQPEPELESESESEFTHPQLVRKPSLLERVMSFNLNKHEP------QYP 116

Query: 132 CDGLDQVPSCETESPAAPDWNQLPRAPSFLERIVSLNFRRS------------DSVKS-- 177
                Q P  E++S       QL R PS L+R++S N  ++            + VKS  
Sbjct: 117 QTHYVQ-PESESDSTKP----QLVRKPSLLQRVMSFNLNKNVPAQPEAENPSLNQVKSKV 171

Query: 178 -----------EKGSGPDVT---------------GLMEEEKGVDARADDFIKSFKQQLR 211
                      E+G   + T                  +E++ VDA+ADDFI  FK+QLR
Sbjct: 172 EMKKSASEKTFERGEEDEETVERRRPATAAARSETTTCKEDEAVDAKADDFINRFKKQLR 231

Query: 212 MQRLDSILRYRNMLR 226
           +QRLDS +RYRN  R
Sbjct: 232 LQRLDSFMRYRNTAR 246


>Medtr1g016100.1 | plant/MHM17-10 protein, putative | HC |
           chr1:4211956-4210484 | 20130731
          Length = 307

 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 42/58 (72%), Gaps = 4/58 (6%)

Query: 170 RRSDSVKSEKGSGPDVTGLMEEEKGVDARADDFIKSFKQQLRMQRLDSILRYRNMLRR 227
           RR  +VK  K     V   ++E++ VD++ADDFI  FKQQL++QR+DSI+RY++M+ +
Sbjct: 250 RRPATVKEAKV----VPAAVDEDELVDSKADDFINKFKQQLKLQRIDSIMRYKDMINK 303


>Medtr4g126170.1 | DUF4408 domain protein | HC |
           chr4:52465031-52464258 | 20130731
          Length = 190

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 85/217 (39%), Gaps = 61/217 (28%)

Query: 23  WLTPSCLFILLNLVIGTIAITSRSACQKRRQLDSCGAPSPSLLDRVTSFGLGCCKIKPAA 82
           W TPS LFI +NLVIGTIA+ SR A        +  AP         +  L  C      
Sbjct: 17  WFTPSPLFIFVNLVIGTIALVSRFA--------AVTAPKTH-----QTHNLSHCNHH--- 60

Query: 83  TVSESQRSVVDPVQNSDSPRLNRVPSSCEIANPAAPDRDPNELGQNQLPCDGLDQVPSCE 142
                Q  V  P   S  P+L             AP   P+ L +  +    L++    +
Sbjct: 61  --HNEQTFVTQPEPESTQPQL-------------APSLKPSLLQR--VLSFNLNKHEPAQ 103

Query: 143 TESPAAPDWNQLPRAPSFLERIVSLNFRRSDSVKSEKGSGPDVTGLMEEEKGVDARADD- 201
           TE          P+ P  +E + S      DS   E+ S P +     E++   AR++  
Sbjct: 104 TE----------PKTPP-IELVKSDPIHDCDS-DDEENSKPMMKKSASEKECSMARSEST 151

Query: 202 ---------------FIKSFKQQLRMQRLDSILRYRN 223
                          FI  FK+QLR+QRL+S +R +N
Sbjct: 152 TSKEEDEADDAKADDFINMFKKQLRLQRLNSFIRSKN 188