Miyakogusa Predicted Gene

Lj6g3v1229490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1229490.1 Non Characterized Hit- tr|I3SY47|I3SY47_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=4
SV,68.83,1e-18,seg,NULL,CUFF.59276.1
         (186 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g039890.1 | hypothetical protein | HC | chr2:17480283-1747...   211   3e-55
Medtr2g039890.2 | hypothetical protein | HC | chr2:17480283-1747...   209   1e-54
Medtr8g017610.2 | plant/F1L3-4 protein, putative | HC | chr8:601...    77   9e-15
Medtr8g017610.1 | plant/F1L3-4 protein, putative | HC | chr8:602...    75   3e-14

>Medtr2g039890.1 | hypothetical protein | HC |
           chr2:17480283-17477887 | 20130731
          Length = 228

 Score =  211 bits (538), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/183 (68%), Positives = 143/183 (78%), Gaps = 2/183 (1%)

Query: 4   SKSTTMSEGRAHSLPERAKEKIEAILHHHQSSCHHKRETHGLDDSINENTSLDDVRAPNV 63
           + S ++ E R   L ERAKE+ EAILH H+SS HH RETHG +  I+ENTSLDDV+APNV
Sbjct: 46  TNSPSVKEARGPDLVERAKEEFEAILHPHKSSSHHHRETHGRNSDIDENTSLDDVKAPNV 105

Query: 64  FERAKEEFEALAQVFHHKKEEPTSDIRDGNQVAESRHKQEIPSSPSSETKTKAENIFVKA 123
           FERAKEEFEA+AQVFHH  E  T DIRD NQ+AE +HKQ I SS SSETKTK  NIFVKA
Sbjct: 106 FERAKEEFEAIAQVFHHNNEASTHDIRDENQMAELKHKQNI-SSSSSETKTKKVNIFVKA 164

Query: 124 KEEIKAMI-XXXXXXXXXXXETHGRSDDIDENTPTNEVKGPDVFERVKEEFEAVFQAIHP 182
           KEEIK++I            ETHGRSDDIDENTP++EVKGP+VFERVKEEFEAV +AIHP
Sbjct: 165 KEEIKSIIHHDKSKHHHHDKETHGRSDDIDENTPSSEVKGPNVFERVKEEFEAVIEAIHP 224

Query: 183 KKE 185
           KKE
Sbjct: 225 KKE 227


>Medtr2g039890.2 | hypothetical protein | HC |
           chr2:17480283-17477887 | 20130731
          Length = 181

 Score =  209 bits (532), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/178 (70%), Positives = 140/178 (78%), Gaps = 2/178 (1%)

Query: 9   MSEGRAHSLPERAKEKIEAILHHHQSSCHHKRETHGLDDSINENTSLDDVRAPNVFERAK 68
           + E R   L ERAKE+ EAILH H+SS HH RETHG +  I+ENTSLDDV+APNVFERAK
Sbjct: 4   VKEARGPDLVERAKEEFEAILHPHKSSSHHHRETHGRNSDIDENTSLDDVKAPNVFERAK 63

Query: 69  EEFEALAQVFHHKKEEPTSDIRDGNQVAESRHKQEIPSSPSSETKTKAENIFVKAKEEIK 128
           EEFEA+AQVFHH  E  T DIRD NQ+AE +HKQ I SS SSETKTK  NIFVKAKEEIK
Sbjct: 64  EEFEAIAQVFHHNNEASTHDIRDENQMAELKHKQNI-SSSSSETKTKKVNIFVKAKEEIK 122

Query: 129 AMI-XXXXXXXXXXXETHGRSDDIDENTPTNEVKGPDVFERVKEEFEAVFQAIHPKKE 185
           ++I            ETHGRSDDIDENTP++EVKGP+VFERVKEEFEAV +AIHPKKE
Sbjct: 123 SIIHHDKSKHHHHDKETHGRSDDIDENTPSSEVKGPNVFERVKEEFEAVIEAIHPKKE 180



 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 42/65 (64%)

Query: 122 KAKEEIKAMIXXXXXXXXXXXETHGRSDDIDENTPTNEVKGPDVFERVKEEFEAVFQAIH 181
           +AKEE +A++           ETHGR+ DIDENT  ++VK P+VFER KEEFEA+ Q  H
Sbjct: 15  RAKEEFEAILHPHKSSSHHHRETHGRNSDIDENTSLDDVKAPNVFERAKEEFEAIAQVFH 74

Query: 182 PKKES 186
              E+
Sbjct: 75  HNNEA 79


>Medtr8g017610.2 | plant/F1L3-4 protein, putative | HC |
           chr8:6018569-6022858 | 20130731
          Length = 96

 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 45/77 (58%), Positives = 50/77 (64%), Gaps = 1/77 (1%)

Query: 110 SETKTKAENIFVKAKEEIKAMIXXXXXXXXXXXETHGRSDDIDENTPTNEVKGPDVFERV 169
           SE   KA NI  +AKEEI+A+            ETHGR+DDIDE T   EVK P VFERV
Sbjct: 13  SEKDVKAPNILERAKEEIEAVFHHDKSPRHDK-ETHGRNDDIDEGTSVEEVKAPGVFERV 71

Query: 170 KEEFEAVFQAIHPKKES 186
           KEE EAV +AIHPKK S
Sbjct: 72  KEELEAVVEAIHPKKVS 88



 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 1/83 (1%)

Query: 6  STTMSEGRAHSLPERAKEKIEAILHHHQSSCHHKRETHGLDDSINENTSLDDVRAPNVFE 65
          S +  + +A ++ ERAKE+IEA+ HH +S  H K ETHG +D I+E TS+++V+AP VFE
Sbjct: 11 SVSEKDVKAPNILERAKEEIEAVFHHDKSPRHDK-ETHGRNDDIDEGTSVEEVKAPGVFE 69

Query: 66 RAKEEFEALAQVFHHKKEEPTSD 88
          R KEE EA+ +  H KK   T D
Sbjct: 70 RVKEELEAVVEAIHPKKVSDTKD 92


>Medtr8g017610.1 | plant/F1L3-4 protein, putative | HC |
           chr8:6021440-6022420 | 20130731
          Length = 93

 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/77 (57%), Positives = 49/77 (63%), Gaps = 1/77 (1%)

Query: 110 SETKTKAENIFVKAKEEIKAMIXXXXXXXXXXXETHGRSDDIDENTPTNEVKGPDVFERV 169
            E   KA NI  +AKEEI+A+            ETHGR+DDIDE T   EVK P VFERV
Sbjct: 10  GEKDVKAPNILERAKEEIEAVFHHDKSPRHDK-ETHGRNDDIDEGTSVEEVKAPGVFERV 68

Query: 170 KEEFEAVFQAIHPKKES 186
           KEE EAV +AIHPKK S
Sbjct: 69  KEELEAVVEAIHPKKVS 85



 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/76 (52%), Positives = 54/76 (71%), Gaps = 1/76 (1%)

Query: 13 RAHSLPERAKEKIEAILHHHQSSCHHKRETHGLDDSINENTSLDDVRAPNVFERAKEEFE 72
          +A ++ ERAKE+IEA+ HH +S  H K ETHG +D I+E TS+++V+AP VFER KEE E
Sbjct: 15 KAPNILERAKEEIEAVFHHDKSPRHDK-ETHGRNDDIDEGTSVEEVKAPGVFERVKEELE 73

Query: 73 ALAQVFHHKKEEPTSD 88
          A+ +  H KK   T D
Sbjct: 74 AVVEAIHPKKVSDTKD 89